Anas platyrhynchos (mallard): 101794833
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Entry
101794833 CDS
T02816
Symbol
COL22A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XXII) chain
KO
K16630
collagen type XXII alpha
Organism
apla
Anas platyrhynchos (mallard)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
101794833
NCBI-ProteinID:
XP_038031001
Ensembl:
ENSAPLG00000009077
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Position
2:5005822..5204256
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AA seq
1614 aa
AA seq
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MSVMGRRRVPHLLVLLTLVFGGERTEAQRAGCKNVHYDLVFILDASSSVGKEDFEKVRQW
VANLVETFEIGPDKTRVGVVRYSDRPTTEFDLGKYKTREEIKEAARKIKYYGGNTNTGDA
LRYINTYSFSKEAGGRLSDRTVKKVAILLTDGRSQDYVLDPATAARQAGIRIFAVGVGEA
LKEELDEIASEPKSAHVFHVSDYNAIDKIRGKLRRRLCENVLCPNVRVEGDRFKHTNGDT
DEIPGFDLMDSFSVKQIFGMKENGIQSSYVRLGSFPVVQKTEDVFPQGLPDEYAFVTTFK
FRKASRKEDWYIWQIIDKYGIPQVSIRLDGENKAVEYNAVGLTKDAVRVVFRSARVSDLF
DRSWHKIALSIQSTAVSLYIDCKLVQMLPIEDRENIDIQGKTVIGKRLYDSVPIDFDLQR
MVIYCDSRHAELETCCDIPSGPCQVTVLTEAPPVEVKPTVGSEQVAHLKTVNCSCSAGEK
GERGPIGPEGPKGQKGESGSQGLPGLRGEKGESGRVYGRGEKGEKGEEGAPGFPGLKGDK
GEKGSLGSPGLPGKDGAKGEAGEPGQPGAFGLPGPAGPKGSEGKQGPPGIKGYVGAPGLQ
GERGEKGTRGDKGERGLDGLPGKPGVEGKQGPAGSPGPPGASGTKGEKGEPGLPGLPGSS
VHTEGLKGEQGEPGPRGPQGQPGLPGPPGEAGPEGKPGVPGLPGQRGKKGEPGFPGINGL
IGPQGPPGPPGIAGPPGPPGAPGLPGEVGVSGKTGPPGPAGLPGKDGLNGLPGLPGQKGE
QGEKGEEGFPGKAGPKGDPGSRGQAGEQGEAGLPGLRGLPGLRGEKGDQGEKGKDGLPGL
KGERGEKGDTGSPGPPGLPGTTAFFTPHPRIPGEPGPKGEKGDQGTSGEPGLPGVPGEQG
VPGPAGLQGTKGQKGARGEVGTPGEAGATGPAGPPGPRGLPGNVGVHGDPGLPGKEGEKG
EKGDPGKEGKVGLPGPAGEPGPAGEPGLPGKGKDGERGERGPPGLPGPFGHKGERGAPGL
PGQPGDRGVPGIGLAGPPGPVGPPGDKGSLGPRGVPGVPGPQGPPGQDGLPGNPGERGPP
GKPGSPPLLSPEDINLLVKDVCTECPPGPPGLPGIPGFKGDKGLRGPPGRDGQDGKMGNA
GPRGPAGPPGLDGPKGAKGDRGTTGDAGEKGEQGHPGMPGFAGAPGTPGPPGPDGAPGPI
GPAGNPGDIGKDGPPGPQGPPGVPGLPGIAGNDGKDGKPGSLGEPGKPGEPGLPGQEGAR
GLPGFKGQRGDTGPPGPRGEPGATGPAGREGPPGKDGDTGPIGPQGPRGLRGQPGKNGLP
GSAGEPGPAGNPGPKGNKGENGSPGLPGFIGPRGPPGDPGEKGPPGKEGAPGKPGEIGSK
GDRGDPGIKGEKGPQGEKGPPGEPGIPGHKGHPGLMGPHGPPGDTGQIGPPGPPGQPGFP
GPRGEPPSLETLRRLIQEELAKQLDAKLAYLLAQIQPAHVKASHGRPGPPGPPGKEGLPG
RPGPPGEPGRPGQTGSEGLPGPIGPKGERGAKGEKGDTGIGQRGEIGPPGIPGLPGEPGY
AKDGMPGPPGPQGEAGVPGLMGPQGPPGANGQCDPTQCAYYASLAARPANVKGP
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttatgggaagacgccgcgtaccccatctcctggttctccttacacttgtgttc
ggtggggagagaactgaggcacaaagagcaggttgcaagaacgttcactatgacctcgtg
ttcatcttggacgcctcctccagtgttggaaaagaagattttgagaaggttcggcagtgg
gtggctaatttggtggaaactttcgagattggcccagataagacccgtgtaggtgtggtg
cgatacagcgatcggccaaccaccgagttcgacctgggaaaatacaaaacccgtgaggaa
atcaaagaggccgccagaaaaattaagtactatgggggcaacacaaacactggagatgct
ctcaggtacatcaacacgtacagcttttccaaagaagcaggtgggagacttagtgatcga
actgttaaaaaagtggctatccttctgactgatggaaggagccaggattatgtcttggat
ccagccactgcagcccgtcaggctggaattaggatctttgcagtgggtgttggcgaagcc
ttaaaagaggaactcgatgagattgcttcagaacccaagtctgctcacgtgtttcatgtc
tccgattacaatgccatcgataaaattcgggggaagctgagaaggcgtctctgtgaaaat
gttctgtgtccaaatgtccgtgtggaaggagatcgattcaagcataccaatggagacact
gatgagattccaggatttgacctgatggattcgttcagcgtgaaacagatctttggaatg
aaagaaaatggaattcagagctcttatgtgcgacttggaagttttcctgttgttcagaaa
actgaggatgtattcccacaaggtctgcctgatgaatatgcctttgtaactaccttcaaa
ttccggaaggcttccagaaaagaagactggtatatttggcagattattgacaagtacggc
ataccacaggtctcaatccgtctggatggagagaacaaagccgtggagtacaatgccgtt
gggctcaccaaagatgccgtgagagtggttttccgcagcgcacgagtcagtgatctcttt
gaccgcagctggcacaagattgccctcagcattcagtcaacagctgtctcgctgtacata
gactgcaagctggtgcagatgctgcctattgaagacagggaaaatattgacattcaggga
aagactgtgattggcaaacgtttgtacgatagtgtccccattgattttgatcttcagcgg
atggttatttactgtgattctcggcatgctgagctggagacctgctgtgacattccctct
ggaccatgccaggtcacggtcctgacagaagcacctcccgtggaagtgaagcccactgtt
ggcagcgagcaagttgcccacctcaagaccgtcaattgctcctgttctgctggagaaaag
ggtgagagaggcccaatcggccctgaaggtcctaaaggccaaaagggagaaagcggcagt
caagggcttcctggactcagaggagaaaaaggagagtcaggcagagtctatggcagagga
gaaaaaggagaaaagggtgaagaaggagcccccggctttcctggattgaaaggtgataaa
ggagaaaaagggtcccttggctcgcctggcctcccggggaaggatggagcaaaaggagaa
gccggtgaaccaggacagccaggagcatttggactgcctgggccagcaggtccaaaggga
tctgagggaaaacagggtcctccaggcattaaaggctacgtaggagcaccgggtctccaa
ggagaaagaggagaaaagggaacacgaggagacaagggagaacgaggcctagatggactc
ccaggaaagccaggtgtggaggggaaacagggccctgctggcagcccaggccctccaggt
gccagtgggaccaaaggggaaaagggtgaaccagggctaccaggattgccaggctcttca
gtacacactgaaggcttaaaaggcgagcaaggagagcctggcccacgaggaccacaaggc
caacctggacttcctggacctccaggagaggctggtccagaaggcaagcctggagtccca
ggtttaccaggtcaaaggggtaaaaagggggaacctggattcccgggaatcaatggtcta
atcggccctcagggacctccagggcccccaggcattgctggaccccctggaccacctgga
gcaccaggactgccaggagaggttggcgtttctggtaaaaccggacccccgggaccagct
ggtttgccaggcaaagatggattaaatggtcttcctgggctcccaggtcaaaagggagaa
caaggggaaaagggtgaagaaggctttcctggaaaagctggccccaagggtgacccagga
agccgtggccaagctggtgaacagggtgaggcaggtcttcctggtctcaggggcttgcct
ggactgagaggagaaaaaggagaccagggagaaaaaggaaaagatggtctcccgggactg
aaaggtgaaagaggagaaaaaggtgacacaggttcccctggcccaccaggcttacctgga
acaacagccttcttcaccccacaccctaggattcctggtgaacctggaccaaaaggggag
aaaggagatcaaggaacaagtggagaacctggattaccaggggtcccaggtgaacagggt
gtgccaggacctgcaggactacagggcacaaaggggcagaaaggcgctcgaggagaagtt
ggaacccctggagaggctggtgcgactggaccagcagggcccccaggtccaagaggattg
ccaggaaatgtgggagtgcatggagatcccggactaccaggaaaggaaggagaaaaaggg
gaaaagggtgacccaggaaaagaaggaaaagtgggtttaccagggcctgctggtgaacca
gggcctgctggagagccaggtttgcctggcaagggtaaagatggagaacggggggaaaga
ggcccaccaggcttgccaggaccttttgggcacaagggtgagaggggagctcctggcctc
cctggacagccaggagacagaggtgtgccaggaatcggactggctggaccccctggcccc
gttggaccaccaggagacaaagggtcattgggtccccgtggtgtacctggtgtccctgga
ccacagggtcctcctggccaggatggtctacctggaaatccaggggaaagaggacctcct
ggaaaaccaggttccccacccctgctctctccagaggacatcaatctcttagtaaaggat
gtgtgcactgagtgccctcctggcccaccaggactaccaggcattccaggcttcaaaggt
gataaaggtctccgaggaccaccaggtagagatggccaggatgggaaaatgggaaatgct
ggtcccagaggtcctgcaggcccacctgggctggatggtccaaagggtgctaaaggagac
cgtggtacaactggggatgcaggagaaaaaggagaacagggtcacccagggatgcctggc
ttcgcaggggctcctggaactcctggtcctcctggaccagatggggcaccgggaccaata
ggaccagcaggaaacccaggagacataggtaaagatggtcctccaggtccacagggccca
ccaggtgtgccaggacttccaggcattgctgggaatgatggcaaagatggcaagccagga
tctcttggggaaccgggaaaacctggagaaccagggctcccaggccaggagggtgccaga
ggcttaccgggtttcaaaggacagagaggagacacaggtcccccaggtccccggggggaa
ccaggtgcgacaggtcctgctgggcgcgagggaccaccagggaaggatggtgataccggt
cccatagggccacagggtcctcgaggactcagagggcagccgggcaagaatggattgcct
ggatctgcaggagagcctggcccagcaggtaacccaggtcctaaaggaaataaaggagag
aacggcagcccaggactccctggcttcataggaccccgaggaccacctggagatccagga
gaaaaaggccctccaggaaaagagggtgcaccagggaaaccaggtgaaattggctccaaa
ggagacagaggagaccctggcatcaaaggcgaaaaaggccctcaaggagaaaagggccct
ccaggtgaacctgggatacctggtcataaaggtcatccaggactgatgggtccccatggg
ccaccaggagacacggggcagattggacctcctggtcccccaggacagccaggatttcca
ggaccaaggggggaacctccatctctagagactttgagaagactcatccaagaggaatta
gctaagcagctagatgcaaagttagcctatctcttggctcagatacagcctgcacatgta
aaagcatcccatggcagaccaggacctcctggtccccctgggaaagaaggactaccagga
agacccggccctccaggagagcctggccggcctggacagactgggtctgaagggctacct
ggccccattggccccaaaggagaaagaggagcaaagggtgagaaaggagatactggcatt
ggccaacgaggtgaaataggtcctccaggaattccaggcctcccaggggagcctggctat
gccaaagatgggatgccaggaccacctggccctcaaggtgaagctggggtgcctggtctc
atgggcccacagggacctccaggagccaatggacagtgtgaccccactcagtgcgcttac
tatgcaagcctggctgccaggcccgccaatgtcaaagggccctag
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