Anas platyrhynchos (mallard): 101795413
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Entry
101795413 CDS
T02816
Symbol
PRPF8
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101795413 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apla03041
]
101795413 (PRPF8)
Spliceosome [BR:
apla03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
101795413 (PRPF8)
Complex C
U5 SnRNP specific factors
101795413 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
101795413
NCBI-ProteinID:
XP_038021631
Ensembl:
ENSAPLG00000010357
LinkDB
All DBs
Position
20:5664028..5683603
Genome browser
AA seq
2335 aa
AA seq
DB search
MAAVFPYRGACAPVPSPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYIAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLKDNRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
VAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQGSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgtgttcccgtaccgcggggcctgcgccccggtgcccagcccgctggcgccg
ctgcccgactacatgtctgaggagaagctgcaggagaaagcccgcaaatggcagcagctg
caggccaagcgctacgccgagaagaggaaattcggcttcgtggacgcgcagaaggaggac
atgccccccgagcacgtccgcaaaatcatccgcgaccacggtgacatgaccaacaggaag
ttccgccacgacaagcgagtctacctgggtgctctgaagtacatgcctcatgctgttctg
aagctcctggagaacatgcccatgccgtgggagcaaatcagagatgttccagtcttgtac
catatcaccggagccatctcttttgtgaatgagattccctgggtcatagagccggtgtac
atcgcgcagtgggggtcgatgtggattatgatgaggcgagagaagagggataggcgtcac
ttcaagaggatgaggttccccccgtttgatgacgaagagccacctctggattatgctgat
aacatcctggatgtggagcccctggaagcaattcagcttgagctggatccagaggaagat
gcccctgtgctagactggttctacgaccaccagccgctgaaagacaacaggaagtatgtc
aatggttccacgtaccagcggtggcagttcactctgcccatgatgtccacgctgtaccgg
ctggcaaatcagctgctcacggacctggtggatgacaactacttctatttgtttgacctg
aaagcattcttcacctccaaggcactgaacatggctattcctggagggcccaagttcgag
cctctcgttagagatatcaatcttcaggatgaagactggaatgaatttaatgacatcaac
aaaatcatcatcaggcagcccatcaggacggagtataaaattgctttcccgtacctgtac
aataacctgccccaccacgtccacctgacctggtatcatactcccaacgttgttttcatt
aaaactgaagatcccgatctcccagctttttactttgaccccctgatcaaccccatttca
cacagacattccgttaagagtcaggaaccactgcctgatgatgatgaagagtttgagtta
ccagagttcgtggaacctttcctgaaggacactccactctacacagacaacacagccaac
ggcattgccctgctctgggccccacggcccttcaacctgaggtctgggaggactcggaga
gctcttgacatcccactggtcaaaaactggtatcgtgagcactgcccagcaggccagcca
gtgaaagtgcgagtctcctatcagaagcttctgaaatactacgttctgaacgcactcaaa
cacagaccccccaaggctcagaagaagaggtacctgttccgctctttcaaggctacaaag
tttttccagtcaacgaagctggactgggtggaagtaggcctgcaggtgtgtcgccagggc
tacaacatgctgaacctgctgatccacagaaagaacctgaactaccttcacttagattac
aacttcaacctgaagccagtgaagaccctcaccaccaaggaaaggaagaaatcccgtttc
ggtaatgctttccatctgtgccgagaggtcctgcgcctgactaaattggtggtggacagc
cacgtccagtacagactgggaaatgtggatgcatttcagttggcagacggcttgcagtac
atctttgcccatgtaggtcagctgacaggaatgtacagatacaaatacaaactgatgagg
cagattcgcatgtgcaaggacctgaaacatctcatctactacaggtttaacacagggcct
gtgggcaaaggtcctggctgtggcttctgggctccaggctggagagtgtggctgttcttc
atgaggggcatcacgccactgctggaacgctggctggggaatctgctagccaggcagttt
gaaggccgtcactcaaagggtgtagcaaagactgtcacaaagcagcgcgtggagtctcac
tttgacctggagctgagggcagccgttatgcatgacattctggacatgatgccagaaggg
atcaaacagaacaaagccagaaccatcctgcagcatctgagcgaggcttggcgctgctgg
aaggccaacatcccctggaaggttcctgggctgcccactcctattgagaacatgatcctg
aggtatgtgaaggcaaaagctgactggtggacaaatacagctcactacaatagagagcgt
atccgtcgcggtgccactgtggacaagactgtctgtaagaagaatctgggccggctgacc
agactctacttaaaagctgagcaggaacgacagcataattacttgaaggatgggccttac
attacagcagaagaggctgttgctgtgtacacaaccacagtgcactggctggaaagcagg
aggttctcacccattccattcccacctctgtcctacaagcatgacaccaagttgctcata
ttagctctggagaggctgaaggaagcttacagtgtgaaatcgcgcctgaatcagtcgcag
agagaggagctgggcttgattgaacaggcttacgataatcctcatgaagctctgtccaga
atcaagcgacaccttttaactcagagagccttcaaggaggtgggtattgagttcatggat
ctctacagccacttggttcctgtttatgacgttgagcccttggagaaaatcacagatgct
tatctggatcagtacttgtggtatgaggctgataagcgaagactcttccctccttggatc
aaacctgctgacaccgaacctcctccactgttagtgtacaagtggtgccaaggcattaat
aacctgcaggatgtttgggaaacaagtgaaggtgaatgcaacgtcatgctggaatctcga
tttgagaagatgtatgaaaagattgacctgacgttgctcaacaggctgttgcgtctcatt
gttgatcacaacatcgctgactacatgacagccaaaaacaacgtggtcatcaactacaag
gacatgaatcacaccaactcctatgggattattcgtgggctgcagtttgcttccttcatt
gtccagtattacgggcttgtgatggacctgctggtgctgggcctgcaccgtgccagcgaa
atggctgggcctccccagatgccaaatgacttcctcagcttccaagacattgccactgag
gtggcccatcccatccgccttttctgcagatacatcgaccgcattcacatcttcttcagg
tttacagcagatgaggcaagagacttgattcagcgctacctgacagagcacccagatccc
aacaacgagaacatcgtaggctacaacaacaagaagtgctggccccgggatgctcggatg
cgcctcatgaaacatgatgtcaacctgggtcgtgctgttttctgggatatcaagaaccgc
ctgcctcgatcagtcaccacagtacaatgggagaacagcttcgtctccgtttacagcaag
gacaaccccaatttgttgtttaacatgtgtggttttgagtgccgtattttgcccaaatgt
cgcaccagctacgaagagttcacgcacaaggacggtgtctggaacctgcagaatgaggtc
accaaggagcgcacagcccagtgcttcctgcgtgtggatgatgagtccatgcagaggttt
cacaacagagtgaggcagatcctcatggcctctggctctacaaccttcactaagattgtc
aacaagtggaacacagccctgattggcctgatgacatatttccgggaagctgttgtaaat
actcaagagctgcttgatttgctggtgaaatgtgagaacaaaatccagactcgaatcaaa
attgggctgaattccaagatgcctagccgtttcccaccggtggtgttttacacccctaaa
gagctgggagggctgggcatgctctccatgggccacgttctcatcccacagtctgacctg
aggtggtccaagcagacagacgttggcattactcacttccgctcaggaatgagtcatgag
gaggaccagctcatcccaaatttgtatcgttacatccagccatgggagagtgaattcatc
gactctcagagagtatgggcagaatatgccctcaagcgacaggaggctatagcccagaac
aggcgtctgacactggaagatctggaggactcgtgggacagggggattcctcgtataaac
acgcttttccagaaggaccggcacaccctagcgtatgataaaggatggagagtcaggact
gacttcaaacagtatcaggtcctgaaacagaacccgttctggtggacacatcagcgtcac
gatgggaagctctggaacctgaacaactaccgcacggatatgatccaggcccttggtgga
gtggagggcatcctggagcacactctcttcaagggcacttacttccctacgtgggagggt
ctgttttgggagaaggccagtggctttgaggagtccatgaagtggaagaagctgacaaac
gcccagagatctggtttgaatcagattccaaacagaagattcactctgtggtggtctcct
accattaacagagccaacgtgtatgttgggtttcaggtgcagctggatttgacaggtatc
tttatgcatggcaagatccccacgctgaagatttctctcattcagattttccgagctcac
ttgtggcaaaagatccatgagagcattgtaatggatttgtgtcaggtgtttgatcaagag
ctggatgctctggagattgagacagtgcagaaagagacaatccatcccaggaagtcatac
aagatgaattcctcatgtgcagatattcttctctttgcttcctataagtggaatgtgtca
cgtccgtcgttgcttgcagattccaaagatgtgatggacagcaccaccactcagaagtac
tggattgatatccagctgcgctggggagattacgattcccatgatattgagcgctacgca
agagccaaattcctggactacactacagacaacatgagtatctatccatctcccaccggt
gtgctcattgccatcgatctggcctataacttgcacagtgcgtatgggaactggttccct
gggagcaaacctctgatccagcaggctatggccaaaattatgaaggcaaatcctgcgctg
tatgtgttgagagaacgaatccgcaaggggttgcagctgtactcatctgagcccacagaa
ccatacctttcctctcagaactatggagagctcttctccaaccagatcatctggtttgtg
gatgacaccaacgtgtacagagtgaccattcacaagacttttgaagggaatttgaccaca
aaacctatcaacggagccattttcatcttcaatcccaggaccggacagctcttcctgaag
atcatccatacatctgtgtgggcaggacagaagcgtctgggacagctggccaagtggaag
actgcagaagaagtggctgccttgattcgatcacttcccgtggaggagcagcctaaacag
atcatagtgactcgaaagggcatgttggacccacttgaggtgcacttgctggatttcccc
aatattgtgatcaaaggctcagagttgcagctgcctttccaggcctgtctgaaagtggag
aagtttggtgatctcatcctgaaagctactgaaccccagatggttctcttcaatctctat
gatgactggctgaaaacaatctcttcctacacggcattctcccgcttgattctgattctc
cgggcactgcatgtgaataacgatcgagccaaagtgattctgaaaccagacaagacgacc
ataacagagcctcaccacatctggccaaccctgacagacgaggaatggatcaaggtggag
gtgcagctgaaagatctgatccttgctgactatggcaagaagaacaacgtgaatgttgca
tccctgacacaatcggagatccgagacattatcctgggcatggagatctctgccccctct
cagcagagacagcagattgcagaaattgagaagcaaaccaaagagcagtcgcaactgaca
gccacgcagacccgcaccgttaacaaacatggggatgaaatcatcacctccacaaccagc
aactacgaaacccagactttctcctccaagactgagtggcgagtcagagcaatttcagct
gccaacctccacctgagaacgaaccacatctacgtttcatcagacgatataaaggaaaca
ggctacacgtacattcttcccaagaacgtgttgaagaaattcatctgcatctcagatctg
cgggcccagattgccggttacctgtatggagtgagccctcctgacaaccctcaagtgaaa
gagattcggtgcatcgtgatggtgccccagtggggaacacaccagaccgtgcatctcccg
gggcagctgccgcagcacgagtacctcaaggaaatggaacctctggggtggattcacacc
cagcccaatgagtccccgcagctgtcaccacaggatgtcaccacccatgccaaggtcatg
gctgacaacccctcctgggacggggagaagaccatcatcatcacctgcagttttaccccg
ggctcctgcaccctgacagcctacaaactgaccccaagcggctacgagtggggcaggcag
aacacggacaaagggaacaaccccaagggctacctgccatcccactatgagagggtgcag
atgctgctctcggatcgcttcctcggcttcttcatggttccagcgcaaggatcctggaac
tacaacttcatgggtgttcgccacgaccccaacatgaagtacgagctgcagctcgccaac
cccaaggagttttaccacgaagtccatcgcccctctcacttcctcaacttcgccctgctg
caggagggggaggtttactccgccgaccgggaggacctctacgcctag
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integrated database retrieval system
