Anas platyrhynchos (mallard): 101795560
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Entry
101795560 CDS
T02816
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101795560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apla03019
]
101795560
Messenger RNA biogenesis [BR:
apla03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
101795560
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
101795560
NCBI-ProteinID:
XP_027321320
UniProt:
A0A8B9SIH1
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Position
10:complement(5381620..5407854)
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AA seq
562 aa
AA seq
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MATELEPPAAGAVQGAAPLEAEEDEEHWLYGDDTTGKQEDGPISGHAESSHPLQDAPQEN
RPVSNEDREMSQHALPSGEDDEEDSDSDSDDDDVKVTIGNIKTGAPSYMGTPMNLNLKTG
RGYGASASAKLQPKGIDLDAAGNINGLPVIEVDLDSFEDKPWRKPGADLSDYFNYGFNEE
TWKAYCEKQRRLQLGLDPAPPISTENKITVQQGRTGNAEKEVENNIIKTEFKTDFLALVG
GRMKAGPPPNRKLGGTIDVIGGQAGTIRRVEGRRRDKHASEENPIQVLGDHGSKPQPPQQ
PQQPSQPQQPPQQQPFAPPAGPPPPPLAGPPPPHFLHPPPPVTSVPPPLHPPGLPPPGPI
PGLFPPPLAPPPALLIPTLDGQPASYNNRQPPPFGYNSADSGFISYPPISTSHTPWVTTV
DKGTSSSSSSHWEYSGSRRERERERERERERERDRDRTPTTSEYNNDDERYRYYSRERSY
DFERDYRRSRDRSREREDRHRERRHRDKEESSKHKSSRRKQHESEEGESHRRHKHKKNKR
SKEEKEASEDGAQEGEEQDAKE
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgagctggagccgccggcggccggcgcggtgcagggcgcggcgccgctggag
gcggaggaggacgaggagcactggctgtacggggacgacaccactggcaagcaagaagat
ggaccaatttcgggacacgcagaatcttctcatcctttgcaagatgctcctcaggagaac
cggcctgtcagcaatgaagaccgagagatgtcacaacatgcccttccgagtggtgaagat
gatgaagaagacagtgatagcgacagtgatgatgatgacgtgaaggttactattggcaat
attaaaacgggagcaccatcatacatgggaactcctatgaatctaaacttaaaaacgggt
agaggctatggagcatcagcttcagccaagttgcagcccaaaggtattgatttagatgcc
gcagggaatataaatggattgcctgttatagaagtggatttagattcatttgaagacaaa
ccatggaggaaaccaggggccgatctctctgattactttaattacggattcaatgaagaa
acatggaaagcttattgtgagaagcagcgacggcttcagcttgggctggatcctgctcct
cccatcagcactgaaaataagattacggtccagcaaggaagaacaggaaatgctgaaaaa
gaagtggaaaacaatatcatcaaaacagaattcaaaacagacttcttggctctggtggga
ggacgcatgaaagctgggcctcctcctaataggaagctgggtgggacaattgatgtgatc
ggtggccaggcaggcacaattaggagagtagaaggaagacgtcgtgataagcatgcctct
gaggaaaacccaattcaggttctaggagatcatggaagcaagccacagcccccacagcag
ccccagcagccatcgcagccccagcagcccccgcagcagcagccatttgcaccaccagca
ggcccaccgccgcccccactcgccgggccacctccaccacacttcctccatcctcctcca
ccagttacttctgttccacctccactgcatcccccaggtctgccaccacccggtcctatt
ccagggctgttcccgcctcctctggcgccaccaccagctctcctcattccgacgctggat
gggcagccagccagctacaacaacaggcagcctcctccatttggctacaactctgcagat
tcaggtttcatcagctacccgcccatctccacgtcccacacgccctgggtgacgacggtg
gacaaaggcacaagcagctccagcagcagccactgggagtactccggctccaggcgcgag
agagagagggaacgcgagcgggagagggaacgggagagagacagagaccgcacgccgacc
actagtgaatacaacaatgatgacgaacgataccgctactacagccgggagcgcagctac
gacttcgagcgcgactatcgccggagtcgagatcgcagccgggagcgggaggatcggcac
cgggagcgcaggcacagggacaaagaggagagcagcaagcataagtcttcgaggcgcaag
caacatgagagcgaggagggggagagtcaccggcgtcacaagcacaaaaagaacaagcgt
agcaaggaggagaaggaggccagcgaagacggtgcccaggagggagaggagcaggatgcc
aaggagtaa
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