Anas platyrhynchos (mallard): 101795778
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Entry
101795778 CDS
T02816
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
101795778 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
apla04131
]
101795778 (VPS8)
Membrane trafficking [BR:
apla04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
101795778 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_VPS8_2
Beta-prop_WDR36-Utp21_1st
TPR_Vps41
zf-RING_Vps41
WD40_CDC20-Fz
Clathrin
zf-RING_11
zf_RING_Vps8_fungal
zf-RING_2
zf-RING_UBOX
Beta-prop_WDR5
Beta-prop_HPS5
WDR55
ANAPC4_WD40
Beta-prop_WDR3_1st
Motif
Other DBs
NCBI-GeneID:
101795778
NCBI-ProteinID:
XP_027319811
Ensembl:
ENSAPLG00000003634
LinkDB
All DBs
Position
9:complement(16331612..16406454)
Genome browser
AA seq
1402 aa
AA seq
DB search
MDAAQEPGSCPPGAEAEPGGLPGPGPPAPRLSAAELDRELDSRSELIDDKEFDIPQVDTP
PTLESILNETDDEEESFILEDPFLLNIDNTDTHSYDTSSVASSDSGDRTHLKRKKKLPDS
LSLHGSVIRLSLLKGISAQIVSAADKVDAGLPTAIAASNLIAVGTSHGLALIFGKDQNQA
LRLCLGSTAVGAQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDAHPPGT
AILHIKFTDDPTLAICNDSGGSVFELSFKRVMGVRTCESRCLFSGSKGEVCCIEPLHAKV
ELRDHPITQYSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAVQNSV
NPMLAFCRGDVVHFLLVKRDDTGAIHVTKQKQLHLHYDLINFTWINSRTAVLLDSVEKLH
VIDRQTQEELETIEIPEVQLVYNSSHFKSLATGGNVSEALALVGEKACYQSISSCGGQIF
YLGTKSVHVMTLRSWRERVDHLLKQERLTDALALAWSFYEGKAKAVVGLSGDTSKRKAVI
ADRMVEILLHYADRTLKKCPDQGKIQVMEQHFQDVVPVIVDYCLLLQRTDLLFNQIYDKM
SENSVAKGIFLECLEPYILSDKLMGITAQVMKDLLLHFQDKNRLENMEACIVHMDITSLD
IQQVVLLCWENRLYDAMIYVYNSGMNDFISPMEKLFKVIAPPLNAGKSLTDEQVVMGNKL
LVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSTEGSVDEEVYPHIRTLLHFDT
REFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQLAKP
NNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIQMAEKAEF
YQICEFMYERELRYDKIIGCYLRDPVRKEEVFNYIHNILSMPGYSAEEKQSVWDKALEHI
KELLQLSPCKAADLVAIHFSEQIESIITNLQDQFLLFQFLRSLLDPREGINQDLIHLPPS
ITEQFIELLCQYSPDEVLETLKVLECCRLEETIQITQKHQLHEASSYLLEKKGDIHGAFL
VMLERLQSKLLMLTQDDESSEQLPLLENIEDTLMKTIALCQRNSHNLNQQQQEALWFPLL
EAMMSPQKLSGSSQYRYAESLKSLTMQVLNNMAAFIALPSILQRILQDPVYGKGKLGEIQ
GLVLGMLDTFNYEQTLLETTTNLLNHDLHWSLCNLRASVTRGLTPKQDYCCICLQQYKRR
QETADEIIVFSCGHLYHSLCLLSKECGVVTKGLMRWMCYKCNSSNKGGKLSENFSELKKG
SATSLAQTGSESVLDPQQIQAFDQLCRLNRGTSRLALLTELSRTHGEKHGLLSVAHGDPA
TSSVFQNETFQLHLAPPPLVEE
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggctcaggagccgggatcctgccccccgggagccgaggccgagccgggcggg
ctgccgggcccggggcctcccgctccgcggctgagcgcggcggagctcgaccgcgagctg
gactcccgcagcgagctgatcgatgacaaagagttcgacatccctcaagttgacacccct
ccgacgctggaaagcatcttaaacgagactgatgatgaagaagagtctttcattctggag
gatccctttctcttgaacattgataacacggatacacattcctatgacacatcttctgta
gcaagttctgacagtggggaccggacacacctgaaaaggaagaaaaaactcccagattct
ctttctctccatggatcagttatacgactctcgcttctgaaaggaatttctgcccagatt
gtatctgcagcagacaaagtggatgctggcttgcccactgctatagcagcatcaaatctg
atagcagtgggaacttctcatgggttagctctgatttttggaaaagaccaaaaccaggcc
cttcgactgtgtctgggcagcactgctgtgggggcccagtacggggctatctcggctctc
agcatcaacaacgactgttcgaggctcctgtgtggctttgcgaaaggacagatcacaatg
tgggatctggccagtgggaagctgctacgatcaataacagatgcccaccccccaggaaca
gctattttgcacattaagtttacagatgatccaacacttgcaatttgcaatgatagcgga
ggctccgtatttgaactgtcatttaagagggttatgggagtgagaacgtgtgaatctcga
tgtctcttcagtggctcaaagggggaggtttgctgtattgaaccactacacgcaaaagtt
gagctgagagaccatcctatcacccagtactcgctattggccatggcctccctaacaaag
atactagttattggcctgaagccatctctgaaagtgtggatgacttttccctatggtcgt
atggacccttctagtgtccctcttctggcgtggcattttgtggctgtacagaactctgtg
aaccccatgcttgcgttttgtcgaggtgatgttgttcattttcttttggtaaagagagat
gatactggtgcaatacatgtcactaagcagaagcagctccatctacactatgacctcatc
aacttcacttggataaactcacggacagcagtgcttctggacagtgtggagaagctgcat
gttatagatcgtcagacacaagaggaactggagaccatagagattccagaagttcagctg
gtctacaacagcagccacttcaaatcgctggctacaggaggcaatgtcagcgaagcactg
gcgttggttggagagaaagcttgctatcagtccatcagcagctgtggtggtcagatcttt
tacctgggaactaagtctgttcatgtcatgacattgaggagctggagagagagagttgac
caccttctgaaacaagagcgtctcactgatgccctggctcttgcttggtccttttatgaa
ggcaaagcaaaggctgtagtaggcttgtctggggacacgagcaagcggaaagcagtcatt
gcagacaggatggttgaaatccttctccattatgctgatcggactttgaagaaatgtcct
gaccaaggaaaaatccaggttatggagcaacattttcaggacgtggtgcctgtcatagtt
gattactgcctcttactccagcgcacggatctattatttaatcagatatatgataagatg
agtgagaattctgtagctaaaggcatctttctggagtgcttggagccatatatcttaagt
gataagctgatgggaatcacagctcaagtgatgaaagacttgctgcttcacttccaagac
aagaacaggctggaaaatatggaagcttgcattgtgcatatggatatcaccagcttagat
atacagcaggtagtacttctgtgctgggaaaaccgtctctacgatgccatgatttacgtc
tacaacagtgggatgaatgacttcattagccccatggagaagctgttcaaagtcattgct
cctccgctgaatgctgggaagtctctcacagatgaacaggtggtaatgggcaacaagctg
cttgtatatataagttgctgcttggcaggccgtgcgtatccactgggtgatattcctgaa
gatctggtacctctggttaaaaaccaggtctttgaatttctcatccggctacattcaact
gagggatctgtggatgaagaggtctaccctcacattcgtaccttgctgcacttcgacact
cgggaattccttaatgttcttgctctgacttttgaagactttaagaatgacaagcaagct
gtggaatatcaacagcgaattgtggacatacttctgaaagtgatggtagagaattctgac
ttcaccccatcacaggttggctgtctctttactttccttgcccgtcagcttgccaaaccc
aacaacacattgtttgtgaacaggacgctttttgaccaggtccttgaatttctgtgtagt
ccagatgatgactcccgccattcagagaggcaacaggtccttttagaattgcttcaggca
ggagggatagtacagtttgaagagagccgtcttatccaaatggcagaaaaagctgaattt
tatcagatttgtgagtttatgtatgaacgagagcttcgctatgacaaaatcattggctgt
tacctgcgtgatccagtgagaaaggaagaagttttcaactatattcacaacatcctgtcc
atgcctggctacagtgctgaagaaaagcaatcagtgtgggacaaagctttggaacacata
aaggagttgctgcaacttagcccatgtaaagcagctgacttggtagccatccacttcagt
gagcagattgagagcatcattacaaaccttcaggaccagttcttactcttccagtttcta
aggagtctgcttgatccgagagaaggcatcaaccaagacttgattcatttaccacccagc
atcacagagcagttcattgagctgctgtgtcagtacagcccagatgaggttttggagacg
cttaaagttctggaatgctgcaggctggaagaaaccatccagataacccagaaacatcag
ctccatgaagcttcctcatatttactggagaagaagggagatatccatggtgcctttctg
gttatgcttgagcgattgcagagcaagttgctgatgcttacacaagatgatgaaagttca
gaacaactccccttgctagaaaacattgaagataccttaatgaaaaccattgctctttgc
cagaggaattcacacaacttaaaccaacaacagcaagaggcactctggtttcccctgctg
gaggctatgatgtccccacagaaactgtccggttcttcacagtatcgctatgctgaatca
ttgaagagtttgacgatgcaagtgctgaacaacatggctgcatttatcgctcttccctca
atcctacagagaattctgcaggatccagtttatggaaaagggaaacttggagaaattcaa
ggacttgtcctgggaatgctggacacttttaactatgaacaaacccttctagagacaact
acgaatcttttaaaccatgatctccactggtcgctgtgtaacctaagagcttctgtcact
agagggcttaccccaaagcaggattactgctgcatttgtctacagcagtacaaaagaagg
caagaaactgctgatgaaatcattgttttcagctgcggccacttgtaccattctctgtgt
ctgctgagtaaagagtgtggggtagtaaccaaaggcctgatgcggtggatgtgctataaa
tgcaactcaagcaacaagggaggaaaactgagtgagaacttttcagagctgaaaaaagga
agtgcgacatccttggcgcagacaggttcagagtctgtgttagatcctcagcaaatccaa
gcttttgaccaactctgccgactcaaccgaggaacctccagactcgctctcctgacagaa
ctgtcccgcacccatggtgaaaagcacgggctgctcagcgtggcgcacggggaccccgcc
accagcagcgtcttccagaacgagaccttccagctgcacctggcgccgcccccactggtg
gaagagtag
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integrated database retrieval system
