Anas platyrhynchos (mallard): 101796025
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Entry
101796025 CDS
T02816
Symbol
TAF1
Name
(RefSeq) transcription initiation factor TFIID subunit 1 isoform X5
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101796025 (TAF1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
apla01001
]
101796025 (TAF1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apla03021
]
101796025 (TAF1)
03036 Chromosome and associated proteins [BR:
apla03036
]
101796025 (TAF1)
Enzymes [BR:
apla01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
101796025 (TAF1)
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
101796025 (TAF1)
Protein kinases [BR:
apla01001
]
Serine/threonine kinases: Other
TAF1 family
101796025 (TAF1)
Transcription machinery [BR:
apla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101796025 (TAF1)
Chromosome and associated proteins [BR:
apla03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
101796025 (TAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
zf-CCHC_6
Cac1_C
Zn_ribbon_12
Motif
Other DBs
NCBI-GeneID:
101796025
NCBI-ProteinID:
XP_005016676
Ensembl:
ENSAPLG00000003176
LinkDB
All DBs
Position
10:complement(12407811..12437504)
Genome browser
AA seq
1600 aa
AA seq
DB search
MMAPVESKFSQSTGDTDKVTDTKPKVAEWRYGPAQLWYDMLGIPEDGSGFDYGFKLKEKT
EQEVKGQADERDGELMDEKDDLLADEHFLMVTQLQWEDDVIWNGEDVKHKGTKTQRASLA
GWLPSSMTRNATAYNAQQGLNRSGSLLNPPIPLAQKPSVAGVLGIAKGKEKQAPEQQVSL
DEDKPWYSIFPIDNEELVYGRWEDNIIWDDQAMETYLDPPVLTLDPNDENIILEIPDEKE
EMTLNSPSKENKKESSLKKSRILLGKTGVIKEEPQQNMSQPEVKDPWNLSNDEFYYPKQQ
GLRGTFGGNIIQHSIPAVELRQPFFPTHMGPMKLRQFHRPPLKKYSFGALSQPGPHAVQP
LLKHIKKKAKMREQERQASGGGEMFFMRTPQDLTGKDGDLILAEYSEENAPLMMQVGMAT
KIKNYYKRKPGKDPGAPDCKYGETVYCHTSPFLGSLHPGQLLQAFENNLFRAPIYLHKMP
ETDFLIIRTRQGYYVRELVDIFVVGQECPLYEVPGPNSKRANTHIRDFLQVFIYRLFWKS
RDRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKPDFRLPTEEEIRA
MVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDEVRTAPWNTTRAF
IAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKKTVTGTDADLRRL
SLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEH
QERYKEECQRIFDLQNKVLESTEILSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLS
REREEQERKELQRMLLGEDSGNDKERGKKDRRDKKGLSSGASANSHKDDDTASVTSLNSS
ATGRRLKIYRTFRDEDGKEYVRCETVRKPSVIDAYCRIRTTKDEEFIRKFALFDEQHREE
MRKERRRIQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDLKLKCGACGAIGHMRTNKFC
PLYYQTNAPPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRK
SLVLKFPKQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDPMVTLSSILEGIINDMRDL
PNTYPFHTPVNPKVVKDYYKIITRPMDLQTLRENVRKRQYPSREEFREHLELIVKNSATY
NGPKHSLTQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKM
MAVPDSWPFHHPVNKKFVPDYYKVIANPMDLETICKNISKHKYQNRETFLDDVNLILANS
IKYNGPDSQYTKTAQEIVNICYQTLAEYDEHLTQLERDISTAKEAALEEADLESLDPMTP
GPYTPQMRQGRGRLGEEDSDVDIEGFDEDDDGKPKTPAPEVEDADGDLADEEEGSAQQPQ
ASVLYEDLLMSDGEDDDDGSDEEGDNPFSSIQLSESGSDSDVETNPVRPKQPHVLQENTR
MGMDNEESMMSYEGDGGETSQVMEDSNISYGSYEEPDPKSNTRDTSFSSIGGYEISEEEE
EEEEQRCGPSVLSQVHLSEDEEDSEDFHSIAGDSDLDSDE
NT seq
4803 nt
NT seq
+upstream
nt +downstream
nt
atgatggcacctgtagagtccaaattttcccagtcaactggtgatacagacaaagtgaca
gatacgaagcctaaagtggcagaatggcgctatggccccgcacagctctggtatgacatg
ctgggaatccccgaggacggcagcggatttgattatggtttcaagctgaaagagaagaca
gagcaggaggttaaaggacaggcagatgagagggatggagagttgatggatgagaaggat
gatctgttagctgatgagcacttccttatggtgacacagctccagtgggaggatgatgtt
atctggaatggagaagatgtcaaacacaaaggaactaaaacacagcgggcaagtctggca
ggctggctgccatcaagcatgactagaaatgccactgcatacaatgcccaacaagggttg
aaccgcagtggctctttgctcaatccacctattccactagcacagaaaccaagcgtagca
ggagttctaggtatagcaaagggcaaagagaagcaggcccctgagcagcaagtttccctg
gatgaagacaagccctggtactccattttcccaattgataatgaagagttagtgtatggc
cgttgggaagataatatcatctgggatgatcaggcaatggaaacctacttggatccccct
gtcttgacacttgatccaaatgatgaaaacataattctagaaattcctgatgagaaggaa
gaaatgactttgaactctccatccaaggagaacaagaaagaatcttctctaaagaagagt
cgaatcctgttgggaaaaactggtgtcatcaaggaagaaccacagcagaacatgtctcag
ccagaggtgaaggatccctggaacctctccaacgatgaattttactaccccaaacagcag
gggcttcgaggaacttttggaggcaacatcatacagcactctatcccagcagtggaactt
cgccagccattctttcccacccatatgggtcctatgaagctccgacaatttcatcggcct
cccctgaagaaatactcttttggtgcactgtcccaaccaggaccccacgctgtgcaacct
ctgctgaagcatataaaaaagaaagctaagatgagagagcaggagcgtcaggcttctggc
gggggtgaaatgttcttcatgcgcacaccacaggacctaactggcaaggatggagatctt
atccttgctgaatacagtgaggaaaacgcccctttaatgatgcaggttggcatggcaaca
aagattaaaaattactacaaaaggaaacctggcaaagatccgggagctccagactgtaaa
tatggagagactgtttattgtcacacttctccattcctgggttctctgcatccaggccag
ctactgcaggcatttgaaaacaaccttttccgggcccctatctatctacataagatgcct
gaaacagatttcctgattatccggacacggcaaggctattatgttcgagagctagtggat
atttttgtagttggccaggagtgcccactttatgaagtacctggtccaaactctaaacgt
gccaacacccatatcagagattttctgcaggtttttatttatcgcctcttttggaaaagt
agagaccgtcctcggagaattcgcatggaggatatcaagaaagcctttccctcgcactcg
gagagtagcatccgaaagcggctaaagctttgtgctgatttcaaacgcacagggatggac
tcaaactggtgggttttaaagccagatttcagattgccaacagaggaagagatcagagca
atggtatccccagagcagtgctgtgcttattacagcatgattgcggctgagcagcgcttg
aaggatgcaggttatggggagaaatccttctttgcaccagaagaagagaatgaagaggat
ttccaaatgaaaatcgatgatgaggtgcgcacagccccgtggaacaccacacgagccttc
attgctgctatgaagggcaagtgtcttctggaagtgactggtgtagcagatcctactggc
tgtggggaaggattttcttatgtgaagattccaaacaaaccaacgcagcagaaggatgac
aaggaaccccagccagtgaaaaagacagtgactgggacagatgctgatctgcgtcgactt
tcactgaagaacgctaaacagcttctgcgtaaatttggagtgcctgaagaggagataaag
aagctgtccaggtgggaagtgattgatgtggtacgcacaatgtctacggagcaggctcgt
tcaggggaaggtcctatgagcaaatttgcacgtggatctcggttttctgtagcagaacat
caagagagatacaaagaggagtgtcagcgcatttttgatttgcaaaataaggttctggaa
tccactgagatcctctcaacagacacagacagcagttcagctgaagacagtgactttgaa
gagatgggaaagaatattgagaatatgttacagaacaagaaaactagttctcagctctct
cgggaaagagaagaacaggaacgaaaggaattgcagaggatgcttttgggagaagacagt
gggaatgacaaagagaggggcaaaaaggacaggagagacaaaaaggggctgtcttcagga
gcttcagcaaactctcacaaagatgatgacactgcctctgtaaccagccttaattcctct
gccactggccgccgcctcaaaatctatcgcacgtttagagatgaggatgggaaggaatat
gtgaggtgtgagacagttcgaaagccctctgttattgatgcctactgccgaatacggact
acaaaggatgaagagttcatacgaaagtttgctctatttgatgaacagcaccgtgaggaa
atgcggaaggagcggcgtaggatccaggaacaattaagacggttaaaacggaaccaagaa
aaagagaaactgaagggccctccagaaaagaagcccaagaaaatgaaagagcgtccagac
ctaaaactgaaatgtggagcgtgtggtgcaattggccatatgaggactaataagttctgc
cctctttactaccaaacaaatgccccaccttctaatcctgttgcaatgacagaagagcag
gaggaagagctggaaaaaacagtcattcacaatgataatgaagaactcatcaaagtagaa
ggaacaaaaattgtccttggaaagcaactgattgagagtgcggatgaggttcgcaggaaa
tcgctggttctgaagtttcctaaacagcagcttcctccaaagaagaagcggcgagtagga
acaaccgttcactgcgactatctgaatcgtcctcataaatccatccaccgacggcgaaca
gatcccatggtgacactgtcatccatcttagagggcatcatcaacgatatgagggatctt
cctaatacatatcccttccacacaccagtaaatccaaaagttgtcaaagattattataag
atcattactcggcctatggatttgcagacattgcgtgaaaatgttcgtaagcggcaatac
ccatcacgggaagagttcagagaacacctggaactaattgtgaagaacagtgcgacatac
aatgggccaaagcactcgctgactcaaatatctcagtccatgctggacctgtgcgatgag
aagctaaaagagaaggaagataaactggctcgattagaaaaagcaattaatcccctcctg
gatgatgatgaccaagtggccttttccttcattttggataacattgtcactcaaaagatg
atggcagttccagattcttggccatttcatcatccagttaataaaaagtttgttcctgat
tattacaaggtcattgccaatccaatggatctggagaccatctgcaagaatatctccaaa
cacaagtaccagaacagggagactttcctggatgatgttaacctcatccttgccaacagc
attaagtacaatgggccagacagtcagtacacaaaaacagcccaggagatcgtaaacatc
tgttatcaaactttagctgagtacgatgagcacctgactcaacttgagagagacatctct
actgctaaggaagcagcgctagaggaggcagatctggaaagtcttgatcctatgacccct
ggtccctacactccacagatgcgccaggggcgaggtaggctgggcgaggaagactctgac
gtagatattgaagggtttgatgaggatgatgatgggaaacctaagactccagccccagaa
gttgaagatgcagatggtgaccttgctgatgaagaagaaggatcagcccagcagcctcag
gccagcgtcctctatgaagacttgctcatgtcagatggagaggatgatgatgatgggagt
gatgaagaaggagataatcctttctcgtctatccaactgagtgagagtggcagtgattca
gatgtggagaccaatcctgtgagacctaaacaacctcacgttcttcaagagaacacacga
atgggcatggacaatgaagaaagcatgatgtcttatgaaggtgatggtggggagacatct
caggttatggaggacagtaatatcagctatggcagctatgaagaaccagacccaaaatcc
aacacaagagatactagcttcagcagtatcggaggatacgagatctctgaagaagaggaa
gaagaagaggaacagcgttgtggaccaagcgtattaagtcaggtccacctgtctgaggat
gaggaagacagtgaagatttccattccattgcaggagacagtgacttggactcagatgaa
taa
DBGET
integrated database retrieval system
