Anas platyrhynchos (mallard): 101796054
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Entry
101796054 CDS
T02816
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
101796054 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apla03400
]
101796054 (XPC)
DNA repair and recombination proteins [BR:
apla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
101796054 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
101796054
NCBI-ProteinID:
XP_027323797
Ensembl:
ENSAPLG00000014249
LinkDB
All DBs
Position
13:10842864..10854401
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AA seq
968 aa
AA seq
DB search
MARKRKASIPAATASKKRPGGPRDEVKKEKEEEEEEEEDDFEEKKPSIKKNKPKVPATKK
KEDSDPGVSKSANKPSKQKGVKLLAKENKKITENKGNHSKEQTCSDSLKPPQRETKLKRE
SSVKKEMDEDNTDNDDDDDESEDEWEDVEELQEPVTDKLEEAAVHSSVALPSNPVEIEIE
TPEQRKKRERREKRKSEFETYLRRMMKRFSKEVREDTHKVHLLCLLANGFYRNRICSQPD
LHAIGLSIIPTRFTKVSAGQVDVLYLSNFVKWFIGTFTVNDELSIEKGEPLQSTLERRFA
IYAARDDEELVHIFLIILRALQLLCRLVLSLQPVPLKETTAKGKGSSKRQSLSSTSEGRE
SSGTTPKAVAKKCPCKKAKKDEKSSGSEEDNKEPEKPRTARTKRTHKSKLTSGSQEQKEI
GNEESGLGEKDVPVKPKNNRRRRVASKVCYKEESGSDEDSASDFEVSEEESDLSDEDFVT
VSKKQRRSLGSQKSKLTSIKSPKTETSESKQSKNCSGVEPRPAKSTAPALPHAPRKRNKI
ISSDEDDGQQLVRKVIGTDQWLEVYLEREDKWVCVDCVHGSVGQPQQCFKYSTKPLYYVV
GFDNDGSVKDVTQRYDPVWMTTTRKNRVDPEWWEDTLQPYRSPFVERDEKEEKEFQVKLQ
DQPLPTAIGEYKNHPLYALKRHLLKYQAIYPESAAILGYCRGEAVYSRDCVHTLHSKDTW
LKQARVVRIGEVPYKMVKGYSNQARKARLAEPANRDKEDLALFGRWQTEEYQPPIAVDGK
VPRNEYGNVYLFLPSMLPVGCVQLRLPNLNRLARKLDIDCAQAITGFDFHGGYSHPVTDG
YVVCEEYKEVLIAAWENEQAEIEKKEKEKREKRALGNWKLLTKGLLIRERLKQRYSIKTE
PSAPETEKGAGFSSDEEGGPSSGTAGRDVAISWPQNRQVEKQKEEQTTKKSKREKKGEAA
QLFPFEKL
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggaaacgcaaagcctccatcccggcggcgactgccagcaagaagcgtcccggg
gggccgcgggatgaggtgaagaaggagaaggaagaggaggaggaggaggaggaagatgat
tttgaagagaagaagcccagtataaagaagaacaaacccaaagttccagctacaaagaag
aaagaagactctgatcctggagtttccaagtcagcaaataaaccttcaaaacaaaaaggg
gtaaaattgctagcaaaagaaaataaaaaaatcacagaaaataaaggaaatcatagcaaa
gagcaaacctgcagtgattcactgaagccccctcagagggagacaaagttgaagagagaa
tcttctgttaaaaaggagatggatgaagacaatactgacaacgatgatgacgatgatgaa
agtgaagatgaatgggaggatgtggaagaactccaggaacctgtcacagataagttagaa
gaagctgctgttcattcctcagtggcgctgccaagtaatccggttgagatagagattgaa
acgccagaacaacgtaagaaaagagagagaagagaaaaaaggaaatctgagtttgagacc
tatcttcggagaatgatgaaacgtttcagcaaggaggttcgtgaggacacgcataaggtt
cacctcttgtgtttattagcgaatggtttctataggaacaggatctgcagccagccagat
cttcatgccattggtctgtccatcatccccacacgcttcacaaaagtgtctgcaggccaa
gtggacgttctctacctttccaacttcgtgaaatggtttattggaaccttcactgtcaat
gatgagctctccattgaaaaaggagagccccttcagtcaaccttggagaggcgctttgcc
atctatgctgcacgagacgatgaagagttggttcatatatttttaattattctccgagca
ttacaactactgtgtcgccttgtgctgtctcttcagcctgttcctctcaaggagacaaca
gcaaagggaaaaggctcatccaagaggcagtcactcagcagtacctctgaagggcgggaa
agctctggcacaacacccaaagccgtggcaaaaaaatgcccctgcaaaaaagccaagaag
gatgagaaatcctcagggagtgaagaagacaacaaggagccagagaaacccagaactgct
cggaccaaaaggacacacaagtcgaagctgacttcaggcagccaggagcagaaggaaatt
ggtaatgaggagagtggtttaggggaaaaagatgtacctgtcaagcccaagaacaatcgc
aggagacgagtggcctccaaagtgtgttacaaagaagagagtggaagtgatgaggacagt
gcttctgactttgaggtttcagaggaggagagtgatctctctgatgaggatttcgtaact
gtatctaaaaaacagagaaggtcattgggctcccagaaatcaaagctaacgtctatcaaa
agccccaaaactgagacttcagaatcaaagcaatccaaaaattgttctggagttgagccc
agaccagccaaaagcacggctccagcattgcctcatgcaccgagaaagaggaacaaaatc
atttctagtgatgaggatgatgggcagcagctggtaaggaaagtcattggcacagaccag
tggctagaggtttaccttgagcgtgaggacaagtgggtgtgtgtggactgcgttcatggc
agtgttggtcagccccagcagtgcttcaaatattccacaaagccactttactatgttgtt
ggatttgacaacgatgggagcgtcaaggacgtgacacaaagatatgacccagtgtggatg
accacaacgaggaagaaccgtgtggaccctgagtggtgggaggacacgctgcagccatat
agaagtccctttgtggaaagagacgagaaggaggaaaaggagtttcaagttaagcttcaa
gatcaacctctaccaacagcaattggagagtacaagaaccaccctctttatgcactaaag
aggcatctcttgaagtatcaggcaatctatcccgagtcagctgctatcctagggtactgc
aggggagaggctgtctactccagagattgtgtacacacgctccactccaaggacacttgg
ctaaagcaggctcgagtagtgaggattggagaagtaccttacaagatggtgaagggatat
tccaaccaggcaaggaaggcacgccttgcagagcctgcaaaccgggacaaagaggacctg
gcactgtttggtcgctggcagacagaggagtaccagccgcctatagcagtggatggaaag
gttcctcggaatgagtatggaaacgtctatctcttcttgccatccatgttaccagttggc
tgtgtgcagctcagactccccaacctgaacagattggcacggaagctggacattgactgt
gctcaagcaatcacaggatttgattttcatggtggctactcgcacccagttactgatggc
tacgttgtttgtgaagaatataaagaggtgctcattgctgcctgggagaatgaacaagca
gaaatagaaaagaaggagaaggagaagcgtgagaagagagctctggggaattggaagttg
ctgacaaaaggacttcttatcagagagagactgaagcaacgctattccatcaagactgag
ccatctgcacctgagacagagaaaggagctggattctcctctgatgaagaaggaggtcca
agttcaggaactgcaggacgggatgtggcaatttcttggccccaaaatcgccaggtagag
aagcagaaggaagagcagacaaccaaaaagagcaagcgagaaaaaaagggagaggcagca
cagttgtttccttttgagaaactgtga
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