Anas platyrhynchos (mallard): 101796235
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Entry
101796235 CDS
T02816
Symbol
TNN
Name
(RefSeq) tenascin-N
KO
K06252
tenascin
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla04510
Focal adhesion
apla04512
ECM-receptor interaction
apla04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101796235 (TNN)
04518 Integrin signaling
101796235 (TNN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101796235 (TNN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
apla00536
]
101796235 (TNN)
Glycosaminoglycan binding proteins [BR:
apla00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101796235 (TNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
EGF_TEN
EGF_Teneurin
DUF4998
Pur_ac_phosph_N
EGF_2
Interfer-bind
Fn3_Dep-1_4th
Fn3_VIN3
Ribosomal_L3
DUF7949
Ig_ILCR1
Motif
Other DBs
NCBI-GeneID:
101796235
NCBI-ProteinID:
XP_038039181
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All DBs
Position
8:complement(12356231..12381393)
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AA seq
1123 aa
AA seq
DB search
MDFQSWFAFLVGVLLCCAVQTSAAQLPASDNCTSNGQRISFSHSYKIDLPTSSQIKVEAD
PLQHVANSEVQLDPGETEENKEQNIIFRHNIHVHKPKGDCETLAHIKGLLERMEKLEKQV
AELREVCSPQKCCGGSQGISPCSGHGTFLYETCSCKCSEGWEGSDCSRPTCQCHGHGRCD
GGKCVCDEPYFGEDCSQQLCPENCSGNGICDTARGVCQCYEEFTGEDCSEKRCPGDCSGN
GFCDTGECYCHEGFFGPDCSQVLAPQNLRLLNSTEDSLTVSWDQMIDVDNYLISYYPVEH
EMLVKQVHVPKERLSYEIEGLHPSTTYNVTLRHVKKGITSEPKHLQASTVLSAPSAIWMA
EEMEHSLEVEWENPPMDVDYYKLKFRSLVEMDEKQVVVPKSSDPKSRHIMTGLKPGTEYE
VTVIPVKDGKEGKPSSVSGKTGIDSPTNVVTDRVSEDTATVSWNKVEAPIDRYMVRYTSA
DGNIKEIEVGSENSIITLLDLKPGMEYIIHIWAEKGPQRSKKASTTAVTEIDSPTMLLTD
QVTEDAITVSWNKVLASIDRYRVSYTSADGYTEEKEVEKDKNVTILAGLKTGMEYVIHVW
AEKGEQQSKRASTEAVTDIDSPAHLVTDQVTERTATISWDRVRAPIDRYMLNYTSADGDT
EEIEVGKNKAATTLIELKPGTKYVIYLWAEKGTRQSKRTSTEAVTEMDSPKNLVADQVTE
DSATISWDSVEAPIDRYMVSYTSADGDTKEMEVGKAKSITTLTGLNAGMKYTIHLWAELG
SKQSKRASTDALTEIDPPKNLRVSYVTQSTGVVTWTPPAAQIDGYSLTYQGPDGTSKAVQ
LGPSEQRFVLEGLEQGAKYTIFVMAYKGDRQSRQTDSTFSTVSFLYPHPADCSQIQQNGD
ALSGTYTIYLNGDSSRPMQVYCDMTTDGGGWIVFQRRNTGELDFYKRWKNYVEGFGDPTG
EFWLGLDQLHNLTSSSPIRYELRVDLRTANESAYAVYDFFQVASSRERYRLSVGNYRGNA
GDAMTYHNGWKFTTWDRDNDVALSNCALTHHGAWWYKNCHLANLNGKYGESKHSEGVNWE
PWKGHEFSIPFTEMKIRPQSSSNESILGRRKRTLQGRRKKIRA
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggatttccagagctggtttgccttcctagttggggtattgctgtgctgtgctgttcag
acatctgccgctcaacttcctgcctctgacaactgcaccagcaatggtcaacgaatatcc
ttcagccactcctacaagattgacctgccaacgtcttctcagatcaaggtggaggcagat
ccattgcagcatgtggccaacagtgaggtgcagctagatcctggggagactgaggaaaac
aaagagcagaatatcatctttaggcacaacatccatgtgcacaaacctaaaggggactgt
gaaactctggcccacatcaaaggtctgcttgagaggatggagaagctagagaaacaagtg
gcagagctgagagaagtctgcagccctcagaagtgctgtgggggaagccaaggcatctct
ccctgcagcggccacgggacattcctgtacgagacgtgcagctgtaagtgctccgagggc
tgggagggcagtgactgctcccgccccacctgccagtgccacggccatgggcgctgcgat
ggtgggaagtgtgtctgtgatgagccctattttggtgaggattgcagccagcagctctgt
ccagagaactgcagtggcaatgggatctgtgacacagccagaggggtctgccagtgctat
gaggagttcaccggagaggactgcagtgagaaacgatgtcccggggactgcagtggcaat
gggttttgtgacacaggagagtgctactgccatgagggcttctttgggcctgactgttcc
caggtgcttgctcctcagaacctgcgcctgctgaactccacagaggactccctgactgtc
agctgggaccaaatgattgatgtggataattacctcattagctactacccagtagaacat
gagatgttggtgaaacaagtccatgtgcccaaagagcggctcagctatgagattgaaggt
ctccaccccagcaccacatacaatgtcacacttcgtcatgtaaagaaggggattaccagt
gagcccaagcatctacaagcaagcacagtcctgtcagcacccagtgccatctggatggca
gaggagatggagcactccctagaagtggagtgggagaacccaccaatggatgtggattat
tacaagctgaagttcaggtccctggtggagatggatgagaagcaggttgtggtacccaaa
agcagtgaccccaagagcagacacatcatgactggcctgaaacctggcacggagtacgag
gtcactgtcatacctgtgaaagatggtaaagaggggaaaccatcctcagtgagtggcaag
actggaattgatagcccaaccaatgtggtgacagaccgagtgtcagaggatacagccact
gtctcatggaataaagtcgaggctcccatagacaggtacatggtgagatacacttcagct
gatgggaacatcaaggaaatagaggtgggcagtgaaaacagcatcatcaccttactggat
ctgaagccaggcatggaatatatcatccacatctgggcagagaagggtccccagaggagc
aagaaggccagcaccacagctgtgacagaaatcgacagtccaactatgctgttgactgac
caagtgacagaggatgcaattacagtttcctggaacaaagtcctggcttcaatagacaga
tacagagtgagttacacatcggctgatgggtatacagaggagaaagaagtggagaaagac
aagaatgtcaccatcttagcaggactgaagacgggcatggagtatgtgattcatgtctgg
gcagaaaagggagaacaacagagcaagagggccagcactgaggctgtgacagatattgac
agccccgctcacctggtgactgatcaagtgacagagaggacagccactatctcctgggac
agggtccgtgctcccatagataggtacatgctgaactacacttctgctgatggtgacact
gaggagatagaagtggggaagaataaggctgccacaactctgatagaactgaaacctggc
actaaatatgtcatctacctctgggcagagaagggaacccggcagagcaagaggaccagc
actgaggcagtgacagaaatggacagcccaaagaatctggtagcagaccaagtgacagag
gactcagccaccatctcttgggatagcgtcgaagctcccatagataggtatatggtgagc
tacacttctgctgatggggacaccaaggaaatggaagtggggaaagccaagagcattaca
actctgacaggactaaatgcaggcatgaagtataccatccatctctgggcagagttggga
agcaaacagagcaagagggcaagcacggatgcactgacagagattgatcctcccaagaac
ctgcgtgtatcatatgtgactcagtctactggtgtagttacctggactcctcctgcagca
cagattgatggctattctctgacctaccagggtccagatggcaccagcaaggcagtgcag
ctgggtcctagtgaacaacggtttgtgctggaaggactggaacaaggagcaaaatatacc
atttttgtgatggcctataagggagatcgccagagcagacagacagacagtaccttctca
acagttagcttcctctacccacatccagcagactgcagccagatacagcagaatggagat
gccctgagcggcacgtacaccatttacctcaacggagacagcagcaggccaatgcaggtg
tactgtgacatgaccaccgatggaggcgggtggatagtgtttcagaggcggaacacaggc
gagctggatttctacaaacgttggaaaaattatgtggaaggctttggagatcccactggg
gaattttggcttggtcttgaccagctgcacaacctcacaagcagcagccccatccgctat
gagctgcgggtggatctgcggacagccaatgagtctgcctacgctgtctatgacttcttc
caggttgcctctagcagagagagatacaggctgtcggtggggaattacagaggcaatgct
ggggatgccatgacctaccacaatggctggaagttcacaacgtgggacagagacaatgat
gtggctctcagcaactgtgctctgacacaccatggcgcgtggtggtacaagaactgccac
ttggccaaccttaacgggaaatacggggagagcaaacacagcgagggggtgaactgggag
ccatggaagggccatgagttctccatcccttttactgagatgaagatccgtcctcagtct
tctagtaatgagtcaatccttgggaggaggaagagaactctacagggaaggaggaagaag
atcagggcttaa
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integrated database retrieval system
