Anas platyrhynchos (mallard): 101796770
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Entry
101796770 CDS
T02816
Symbol
FDFT1
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla00100
Steroid biosynthesis
apla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
101796770 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
apla01006
]
101796770 (FDFT1)
Enzymes [BR:
apla01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
101796770 (FDFT1)
Prenyltransferases [BR:
apla01006
]
Terpene biosynthesis
Squalene/phytoene synthase
101796770 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
SCC3_C
HAUS4
Motif
Other DBs
NCBI-GeneID:
101796770
NCBI-ProteinID:
XP_027311186
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All DBs
Position
3:complement(116388941..116401834)
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AA seq
418 aa
AA seq
DB search
MELLRTWLGHPEDIYNLLRFKMGGYRAVMPRIDPDSLGLGLRTCYRYLNQTSRSFAAVIQ
ALDGELRHAVCIFYLVLRALDTIEDDMTISLDVKVPMLHEFHSYLYQPDWKYMESKEKDR
QVLEDFPTISMEFRNLSKVYQDVISDICHKMGVGMAEFLEKKVDSQREWDKYCHYVAGLV
GIGLSRLFSASELEDPIVGQDTELANSMGLFLQKTNIIRDYLEDQLEGREFWPREVWSRY
AKKLSDLAKPENIDMAVQCLNELITNALHHVPDVLTYLSRLKNQSVFNFCAIPQVMAIAT
LAACYNNKQVFRGVVKIRKGQAVTLMMDATNIQAVKAIMYQYVEEIYQKIPSTDPSSNKT
QQIIASIRTMSLPGGPMASRHHYSPIYLSCAMLLAALSWQYLSTISKAAEEYVQAGEN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggagctgctgcggacatggctggggcaccccgaggacatctacaacctgctgcgcttc
aagatgggcggctaccgggctgtcatgccccgcatcgacccggactcgctgggactcggc
ctccgcacctgctaccgctacctcaaccagaccagccgaagcttcgccgccgtcatccag
gccctggacggagagctgcgccacgccgtctgcatcttctacctagttctgcgtgccctg
gacaccatagaggatgacatgaccatcagcctggacgtcaaggtcccgatgctgcacgag
tttcactcctatctctaccagccggactggaagtacatggagagcaaggagaaggaccgc
caggtgctggaggacttccccacgatctccatggagttcaggaacctgtcgaaagtctac
caggacgtgatttcagacatttgccacaagatgggcgtcgggatggccgagttcttggag
aagaaggtggattctcagcgggagtgggataagtactgtcactacgtagctgggctggtg
gggataggcctttcccgtctcttctctgcatcagagctagaagatccgattgtcgggcag
gacacggagctggcaaactccatgggcctcttcctgcagaaaaccaacatcatccgtgac
tatctggaggaccagctggagggaagggagttctggcccagagaggtttggagcagatac
gcaaaaaagctctcggaccttgccaaaccagagaacatagatatggctgtccagtgtctg
aacgagctcatcaccaacgctctccaccatgtccctgatgtccttacgtatctgtcccgc
ctgaaaaaccaaagcgtcttcaacttctgtgctatcccccaggtgatggccatcgccact
ctggccgcctgctataacaacaagcaggtgttcaggggcgtagtgaagatccggaaggga
caagccgtcactctgatgatggacgccacaaacatacaggctgtcaaagccatcatgtac
cagtatgtggaagagatctaccagaagatccccagcaccgacccttcctccaacaagacg
cagcagatcatcgcctccatccgcaccatgagcctgcccggcggccccatggcctcgcgc
caccactactcccccatctacctgtcgtgcgccatgctgctggccgccctcagctggcag
tacctcagcaccatctccaaggccgccgaagagtacgtccaggcgggcgagaactga
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