Anas platyrhynchos (mallard): 101796893
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Entry
101796893 CDS
T02816
Symbol
SCN8A
Name
(RefSeq) sodium channel protein type 8 subunit alpha isoform X4
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
apla04040
]
101796893 (SCN8A)
Ion channels [BR:
apla04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
101796893 (SCN8A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
IQ
HB_ELP1
Motif
Other DBs
NCBI-GeneID:
101796893
NCBI-ProteinID:
XP_027301511
Ensembl:
ENSAPLG00000010964
LinkDB
All DBs
Position
Unknown
AA seq
1978 aa
AA seq
DB search
MAARLLAPPGPDSFKPFTPESLANIEKRIAEEKKKKRPKQDSSHRDDDEDSKPKPNSDLE
AGKNLPFIYGDIPKGLVAVPLEDFDPYYMTQKTFVVLNRGKTLFRFSATPALYILSPFNL
FRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKNVEYTFTGIYTFESLVKIIAR
GFCIDGFTFLRDPWNWLDFSVIMMAYITEFVNLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVIWPINVNETFLDNGSRGF
DWEEYTNNMSNFYIIPGAPDPLLCGNSSDAGQCPEGYTCMKAGRNPNYGYTSFDTFSWAF
LALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMVTSAGTVSEDAVEDDGGGRMSRSSSEISK
VSSKSAKERRNRRKKRKDKELSEGEEKGDAEKVFKSESEDGMRRKAFRLPDNRIGRKFSI
MNQSLLSIPGSPFLSRHNSKSSIFSYKGRFRDPGSENEFADDEHSTVEESEGRRDSLFIP
IRGRDRRSSYSGYSGYSQGSRSSRIFPNLRRNVKRNSTVDCNGVVSLIGGPPSSMPGGRL
LPEGTTEIEIKKKPGGSLLVSMDQVNVSYGRKDRTNSVMTGLTNTLVEELEESQRKCPPC
WYRFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFE
HVLSVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELGLANVEGLSV
LRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYK
ECVCKINPECELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMV
IGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGIAWIKAKVREFMHTH
FKQRGGDEVKPLDELYDKKVNCIANHTGADINRDIDYQKNGNGTTSGIGSSVEKYIIDED
HMSFINNPNLTVRVPIAVGESDFENLNTEDFSSDTDPDGSKEKLDDTSSSEGSTIDIKPE
VEEVPVEAPEEYLDPDACFTEGCMQRCKCCQVNIEEGLGKSWWTLRKTCFLIVEHNWFET
FIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWCAYGFVKFFTN
AWCWLDFLIVAVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVG
AIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETSEERFEIDIVNNKTDCEALMPP
NSTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKQEEQPKYEDNIYMYI
YFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQK
PIPRPLNRIQGAVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMEDILYWINLVFV
IFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLA
RIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGI
DDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCDLDKEHPGSGFKGDCGNPSVG
IFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDATQF
IEYSKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGEL
DILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVMQRAYRARLARRGFVSRRPVP
TKLENGGTNREKKEGTPSTASLPSYDSVTKPEKEKQQRAEEGRREKAKRQKDVRESKC
NT seq
5937 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacggctgctcgcaccaccaggccccgatagttttaaacctttcactccggag
tctctggctaacattgagaaacgcattgcagaagaaaaaaagaagaagcgtccaaagcaa
gacagcagccaccgggatgacgatgaagacagcaaaccaaaaccaaacagtgaccttgag
gcagggaagaatttgcctttcatctacggggacatccctaaaggcctggttgctgtacca
ctggaggactttgacccttattatatgacccagaaaacctttgtagtactaaacagaggg
aaaacactcttccgatttagtgccacacctgccttgtacattttaagtccttttaatctg
tttagaagaatagctattaaaattttgatacattcagtatttagcatgatcattatgtgc
actattttgaccaactgtgtattcatgacttttagtaacccgcctgaatggtcgaagaat
gtggagtatacattcactggtatttatacatttgaatcacttgtgaaaattattgcaaga
ggtttctgtatagatggctttactttcctacgtgatccatggaactggctagatttcagt
gtgatcatgatggcgtatataacagagtttgtaaacctaggcaatgtttcagctctgcgc
actttcagggttctgagagctttgaaaactatttctgtaattccaggcttgaagaccatt
gtgggtgccctaattcagtctgtgaagaagctgtcagatgtaatgatcttgacagtattt
tgtctcagtgtctttgctctgatcgggttgcagctgtttatgggcaatttgaggaacaag
tgtgtgatctggccaattaatgtgaatgagacgttcctggataacggctctaggggcttt
gactgggaggaatacaccaacaatatgtcaaatttttacataattcctggtgcccctgat
cctttgctctgtggtaacagctcagatgcaggtcaatgtccagagggctacacatgcatg
aaagcaggacggaacccgaactatggttacacaagctttgacactttcagctgggctttt
ctggctttgtttcgccttatgactcaggacttttgggaaaacttgtatcaattaacctta
cgagcagcaggaaaaacctacatgatcttcttcgtcttggtgatctttgtgggatcattc
tatctggtaaacctaattttggctgtggtggctatggcttatgaagagcagaaccaggcc
acgttggaggaggcagagcagaaagaggcagaatttaaggccatgttagaacaattgaaa
aagcagcaggaagaagcacaggctgctgctatggtcacttcggcagggacagtctctgag
gatgctgtggaagatgatggtggggggaggatgtctcggagctcctcggagatttccaaa
gtcagttccaagagtgccaaggagcgtcgaaaccggaggaaaaaacggaaggacaaagag
ttgtcggaaggagaggagaagggtgatgctgaaaaggtgttcaagtctgaatcagaggat
ggcatgaggaggaaagcattcaggctacccgataacaggataggaaggaagttttccatc
atgaaccagtctctcctcagcatcccaggctccccttttctctcccggcacaatagcaag
agcagcatcttcagctacaaagggcgatttcgtgacccgggttctgaaaatgagtttgct
gatgatgagcacagcacagtggaggagagcgaaggcaggagagactccctcttcatcccc
atccgtggccgtgaccgaaggagcagctacagcggctacagcggctacagccaaggcagc
cggtcctcgcggattttccccaacctccgccgaaacgtgaagaggaacagcacggtggat
tgtaacggcgtggtgtccctcatcggcggcccaccttccagcatgcctgggggacgcctt
ctgcctgagggtaccactgaaatagaaattaaaaagaaacctggtgggtctctcttggtc
tcgatggatcaggtgaatgtctcctatggaagaaaggatcgaaccaacagtgtaatgacc
ggcttgacaaatacccttgttgaggagctggaagagtcccagaggaagtgtcccccttgc
tggtacagatttgccaacacgttcttgatctgggaatgccacccgtactggatcaagctg
aaggagatagtgaacttaattgtcatggatccttttgttgacctggccatcaccatctgt
attgtgctgaacactctgttcatggcaatggagcaccatcccatgacccccgagtttgaa
catgtgctctccgtaggaaatctggttttcactggaattttcacagcagaaatgttcctg
aagcttatcgccatggatccctactattatttccaagaaggctggaacatctttgatgga
tttattgtctccctcagtttaatggaactgggtctagcaaacgtggaaggactttccgtg
ctgcgatctttccgattgctgagagtcttcaaactggccaagtcttggcccactctgaat
atgctgataaaaatcatcggtaactcggtgggtgctttggggaacctgaccttggtgcta
gccatcatcgtgttcatctttgcggtggtgggcatgcagctcttcggcaaaagctacaag
gagtgtgtctgcaagatcaatccggagtgtgagctaccccgctggcacatgcacgatttc
ttccactccttccttattgtcttccgtgtgttgtgtggggaatggattgagaccatgtgg
gattgtatggaggtggcaggacaggccatgtgcttgattgtcttcatgatggtcatggtc
atcggaaatttagtggtgctgaacctattcttggccttgctactgagctccttcagcgca
gacaacctggcagccacagatgatgacggggagatgaacaacctgcagatttctgtcatt
cgcatcaagaagggcattgcctggatcaaggcgaaagtgcgtgaattcatgcacactcat
ttcaagcagagagggggagatgaggtcaaacccttggatgaattgtacgacaagaaggtg
aactgcattgctaaccacacaggggctgatatcaacagagacattgattatcagaagaat
ggcaatggcacgacaagtgggattgggagcagcgtggagaagtacataatagatgaggat
cacatgtccttcatcaataaccccaatctcactgtccgggtacctattgctgtaggagaa
tcagattttgaaaatctcaacacagaagatttcagcagtgatacagatccagatggcagc
aaagagaaactggatgataccagctcctctgaaggtagcaccattgatataaaacctgag
gtggaagaagtccctgtggaggccccagaggagtacctggacccagatgcgtgtttcaca
gaaggttgcatgcagcgctgtaaatgttgtcaggtcaatattgaggaagggctgggaaag
tcttggtggaccttgaggaagacgtgttttctgattgtggaacataactggtttgagact
ttcatcatctttatgatcctactgagcagtggtgctctggcttttgaggatatttacata
gaacagaggaaaaccatccggaccatcctggagtatgcggacaaggtcttcacttacatt
ttcatcctggagatgttgctgaaatggtgcgcctatggattcgtcaagttcttcactaat
gcctggtgctggctggatttcctcattgtggctgtctctttagtcagccttgtagctaat
gccctgggctactcggaactaggtgccataaagtcccttaggacactaagagctttgagg
cctttaagagcgttgtcccgatttgaggggatgagggtggttgtcaatgccttggttggc
gctatcccttccattatgaatgtgttgttggtctgccttatcttctggctgattttcagc
attatgggggttaacctgtttgccgggaaatatcattactgctttaatgaaacatccgag
gagcgctttgaaatagatattgttaacaacaagacagactgcgaagccctgatgccgccc
aactccactgagattcgatggaagaatgtgaaaattaacttcgacaacgtcggggcagga
tacctggctctcctgcaagttgccactttcaagggctggatggacatcatgtatgcagca
gtagattccagaaagcaagaagagcaacccaagtacgaggacaacatttacatgtacata
tattttgttatcttcatcatctttggctcctttttcaccctgaacttgttcattggtgtc
atcattgacaacttcaatcaacaaaagaaaaagtttggaggtcaagatattttcatgaca
gaagaacaaaagaagtactataatgccatgaaaaaactgggctcaaagaagcctcaaaag
cctattccccgacctctgaaccgtattcagggagctgtctttgactttgtaactcagcaa
gcttttgatatagtcatcatgatgctcatctgcctcaacatggtgaccatgatggtggag
acagacacacaaagcaagcagatggaggacatcctttactggatcaacctggtgtttgtc
atcttcttcacctgtgagtgtgtgctgaagatgttcgccttgcggcactattatttcacc
atcgggtggaacatttttgacttcgtggttgtgattctgtccattgtgggaatgttcctg
gctgaaatcattgagaagtattttgtatcacccacgctcttccgagtcatccgcctggct
cgtattggacgtatcctgcgtttgatcaaaggagccaaaggaatccgcaccttgcttttt
gccttaatgatgtctttgcccgccttgttcaacatcggcctcttgctgttcttggtcatg
ttcatcttctccatcttcggcatgtcaaactttgcctacgtcaagcatgaggctggcata
gatgatatgttcaacttcgagacctttggcaacagcatgatctgcttgttccagatcacc
acgtcggccggctgggatggcctgctgctgcccatcctaaaccggcctccagactgcgat
ctagacaaggagcatcccgggagtggttttaagggggattgcgggaacccttcagtgggg
atttttttctttgtgagttacatcatcatctccttcctgatcgtggtcaacatgtacatt
gccatcatcctggagaacttcagcgtggcgacagaggagagtgcggatccgctgagtgag
gatgactttgaaactttctacgagatttgggagaagttcgatcccgacgccacgcagttc
atcgagtacagcaagctcgcggactttgctgatgctttggaacatcctctccgggtcccc
aaacccaacaccattgaactcattgccatggacctgcctatggtaagtggagacaggatc
cactgtttagacatcctgtttgccttcaccaaacgtgtcctgggggacagtggagagctg
gatatactgagacaacagatggaggaaagatttgtggcatccaacccttccaaagtgtct
tatgagcccatcacaactacgctgcggcgtaagcaggaagaagtctcagcagtggttatg
cagagggcttacagggctcgtttagccagacgggggtttgttagccgaaggcccgtcccc
acaaaactggaaaacggaggaacaaacagggagaaaaaagaaggcaccccatccacggca
tctctcccgtcatatgacagtgtgactaaacctgagaaggagaaacagcaacgggcagag
gaaggaagacgagaaaaggcaaaaagacaaaaagatgtcagggaatccaagtgttga
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integrated database retrieval system
