Anas platyrhynchos (mallard): 101797025
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Entry
101797025 CDS
T02816
Symbol
LSM1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1 isoform X1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101797025 (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apla03019
]
101797025 (LSM1)
Messenger RNA biogenesis [BR:
apla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101797025 (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
101797025 (LSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
101797025
NCBI-ProteinID:
XP_038022768
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All DBs
Position
23:788708..791102
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AA seq
133 aa
AA seq
DB search
MNYMPGTASLIQDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIP
RGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRLELQAKQESEKLKVQALKER
GLAVPRADTLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacatgccgggcacggccagcctcatccaggacatcgacaagaagcacctggtg
ctgctgcgagatggccggacgctgatcggcttcctgcgcagcatcgaccagttcgcgaac
ctggtgctgcaccagaccgtggagcgcatccacgtgggcaagaagtacggggacatcccc
cggggcatcttcgtcgtcaggggcgagaacgtcgtcctgctgggggaaatagacctggag
aaggagagcgacacgccgctgcagcaggtctccatcgaggagatcttggaggagcagcgg
ctggagctgcaggccaagcaggagtcggagaagctgaaggtgcaggcgctgaaggagcgg
ggcctggcggtgccgcgcgcggacaccctggatgagtactga
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integrated database retrieval system
