Anas platyrhynchos (mallard): 101797052
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Entry
101797052 CDS
T02816
Name
(RefSeq) protein transport protein Sec24D-like isoform X1
KO
K14007
protein transport protein SEC24
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101797052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
apla04131
]
101797052
Membrane trafficking [BR:
apla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
101797052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
GDP_Man_Dehyd
Motif
Other DBs
NCBI-GeneID:
101797052
NCBI-ProteinID:
XP_038034911
Ensembl:
ENSAPLG00000002436
LinkDB
All DBs
Position
4:887020..944397
Genome browser
AA seq
1046 aa
AA seq
DB search
MSQQSYVAAPPYSQSQPRTGGFSTNFGPPNSSLHYGDPNSSYAAPQQGFLHKSTSCLAGM
SKSTLPLGSSAPVGPPPPGTHQLSQTNFQNGPSAAGQPMHRFQGPPPPNNTGPSYPPYSH
QSQPAYPNTASTSSTTQLANQLNSMQINSYGPGATPSSHTSSGHPASFQLPQPTPPTQQQ
TALPPGSRVPPPANNFSGLCAQPSLPTMARQDGIPGCGPLNPNLQQLPGQPPGPGYHPQQ
ANYGPQMAGSQLSYPGAFPGGPTQFSGLQQKKLDPDSIPSPIQVIENDKASRGGQIYATN
TRGQVPPLVTTDCIIQDQGHASPRYIRCTTYCFPTSSDMAKQTHIPLAAVIQPFAIVPQN
ETPLYVVNHGETGPIRCNRCKAYMCPFMQFIEGGRRYQCGFCNCINDVPPFFFQHLDHIG
RRVDHYERPELSLGSYEYVATLDYCRNNKPPNPPAYIFMIDVSYRNINSGLVKLICEELK
TLLDKLPREEQEESSAIRVGFVTYNKVLHFFNVKSNLAQPQMMVVSDVGEVFVPLLDGFL
VDFQESRSVVNNLLDQIPEMFADTNESETIFAPVIQAGMEALKAAECAGKLFIFHSSLPT
AEAPGKLRNRDDKKLLNTDKEKTLFQPQVNYYETLARDCVANGCCVNLFLFPNQYVDIAS
LGLVTMYTGGTLYKYNNFQLSSDSPQFLTDLRKDIEKKTGFDAIMRVRTSTGFRATDFFG
AIYMNNTTDVEMAAVDCDKAVTVEFKHDDKLNEDSGALIQCAVLYTSISGQRRLRIHNIG
LNCSSQLADVYKTCETDALINFFAKSAFKAILSQPLKTVREILVNQTAHMLACYRKNCAS
PSAVSQLILPDAMKVLPVYMNCLLKSCVLVSRPEIPTDERAYHQQLVMAMGVADTQLFFY
PQLLPIHSLDLKSDAVPAAVRCSEERLSEGGAFILANGLSMFLWLGVSTPPELIQGLFNV
PSFAHISTEATLLPDLDNPYSKKIKSIMEHIQSQKPYTMKLMIVKQREQPEILFRQFLVE
DKNIYGGASYVDFLCCVHREICQLLN
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaacaaagttatgttgcagctcctccgtattcccaatcccagccaagaacggga
ggcttttctacaaattttggaccacctaattcttcacttcattatggtgatcccaactcc
tcatatgcagcacctcaacaaggattcttacataaaagtacatcctgtttggcaggtatg
tcaaaatcaactttgcctcttggatcttcagctcctgttgggcctccaccacctggtaca
catcagttgagccagaccaacttccagaatgggcccagtgcagcaggacagccaatgcac
aggtttcaaggccctccacctccaaacaatacaggaccttcctatcctccctacagtcat
cagtcacagccagcctacccaaatactgcatccacttcatctacaacacaacttgctaac
cagctcaacagcatgcaaataaatagctatggtcctggcgctactccgagctctcacaca
tcttctgggcatccagcatcttttcagcttccacagccaacacctccgacacagcagcaa
acggctttgccacctggatcacgggttcctccaccagcaaataatttcagtggcctttgt
gctcaaccttcgttgccaactatggccaggcaagatgggatccctggatgtggccctctg
aatcctaacttgcaacagcttccaggacagcctccagggcctggatatcatcctcagcaa
gcaaactatggacctcagatggcaggatctcagctgtcttatcctggtgcctttcctgga
ggtccaacacagttctctggtctacaacagaagaaacttgatcctgactctattccaagt
ccaattcaagtaattgaaaatgacaaagcttctaggggaggacagatatatgctacaaac
acaagaggacaggttcctcctctcgtcactacagactgcataatccaagatcaaggccat
gccagccctcgttatatccgatgtactacctactgcttcccaacatcttcagatatggcc
aaacagactcacatcccactggcagctgtcatccagccttttgctattgttccacaaaat
gagacacctctttatgttgtaaaccatggtgagactggaccaatccgatgtaacaggtgc
aaagcttacatgtgtcccttcatgcagtttattgaaggtggaagaaggtatcagtgtgga
ttttgcaattgtataaatgatgtcccgccgttcttctttcaacatctggaccacattggc
cgacgggtagaccattatgaaagacctgagctatctctgggatcatatgaatatgttgct
actttggattattgccgaaataacaagcctccaaatccaccagcttatatcttcatgatt
gatgtatcataccgaaatataaacagtggtctagttaaactcatatgtgaggaactgaag
acactgctagataagcttccaagagaagagcaagaagaatcctcagcaattcgagttggt
tttgtcacttataacaaggtcctccacttctttaatgtaaaaagcaacttagctcagcct
cagatgatggtggtctcggatgtcggagaagtttttgttcctttgctggatggtttcctt
gttgactttcaggaatcacgatctgttgttaacaacttgttggaccagattccagagatg
tttgcagacactaatgagagtgagaccatctttgctcctgttatccaggctggcatggag
gcactaaaggctgcagaatgtgctggaaaattgtttatcttccattcttcattgccaact
gcggaagcaccagggaagctgagaaacagagatgacaaaaaactactcaatacagataaa
gaaaagacactcttccagcctcaagtaaattattatgagactttagccagagattgcgtg
gctaacggctgctgcgtgaatttgttcctcttcccaaatcagtatgtggacatagcctcc
ctgggtcttgtcacaatgtacactggaggaacattgtacaagtacaacaatttccagctc
agttctgatagcccccagttcctcaccgacctcaggaaggacatagaaaaaaagaccggc
tttgatgcaataatgagggttcggacaagtacaggcttcagggctactgacttctttggt
gcaatttacatgaacaacaccacagatgtagaaatggcagcagttgactgtgacaaggca
gtgacggtagagttcaaacatgatgacaaactgaatgaagacagtggcgccttaattcag
tgtgctgtcctttacacatcaataagtggacaaagaagactgcgcatccacaatattggt
ttaaactgtagctcccagttagctgatgtctacaagacttgcgagactgacgcgctgatc
aacttctttgctaagtcagcttttaaagctattctaagccaacccctgaagacagtcaga
gagatcctggtcaatcagacagctcacatgctggcgtgttaccgcaagaactgtgccagc
ccatcagcagtaagccagctcatccttccagacgcgatgaaggtgctgccagtgtacatg
aactgcctgctcaagagctgcgtgctcgttagcagaccagaaattccaactgatgagaga
gcttaccatcagcagctggtcatggccatgggagtggctgacacccagctcttcttctac
ccccagcttctgccaattcacagcctagatctgaagagtgacgctgtcccagctgctgtc
cgctgctctgaggaacgtctctcagaaggaggtgccttcattctggccaatggtctgagc
atgttcctgtggctgggggtcagcacacccccagagctcatacaggggcttttcaatgtg
ccatcctttgcacacatcagcacagaagctacattactgcctgacctggacaatccatac
tctaagaagattaagtcaataatggagcacatccagagccaaaagccctacaccatgaag
ctgatgatagtgaaacagcgggaacagccagagatccttttccgacagttcctggtagaa
gacaagaatatttatggaggagcttcttatgtggatttcttatgctgcgttcacagagag
atctgccagctgctcaattaa
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