KEGG   Anas platyrhynchos (mallard): 101797069
Entry
101797069         CDS       T02816                                 
Name
(RefSeq) cullin-4A isoform X1
  KO
K10609  cullin 4
Organism
apla  Anas platyrhynchos (mallard)
Pathway
apla03420  Nucleotide excision repair
apla04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:apla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    101797069
  09124 Replication and repair
   03420 Nucleotide excision repair
    101797069
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:apla04121]
    101797069
   03400 DNA repair and recombination proteins [BR:apla03400]
    101797069
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:apla04147]
    101797069
Ubiquitin system [BR:apla04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     101797069
DNA repair and recombination proteins [BR:apla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      101797069
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      101797069
Exosome [BR:apla04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   101797069
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW ADH_zinc_N
Other DBs
NCBI-GeneID: 101797069
NCBI-ProteinID: XP_027300238
Ensembl: ENSAPLG00000001201
LinkDB
Position
1:complement(144440442..144476198)
AA seq 770 aa
MADEAQKKPHLSALVGHTNGLTKLAATASSSSRGGGGGGGGGGGSATTAPSKKLVIKNFR
ERPKLPDNYTQDTWQKLHDAVGAIQSSVSIRYNLEELYQAVENLCSYKVSATLYKQLRQV
CEDHVKAQILQFREDSLDSLLFLKKINKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPS
IWDMGLELFRNHVISDKQVQNKTIDGILLLIERERSGEAVDRSLLRSLLSMLSDLQVYKE
SFEQRFLEETNCLYAAEGQRLMQEREVPEYLHHVNKRLEEEGDRVITYLDHSTQKPLIAC
VEKQLLGEHLTAILQKGLDNLLDENRISDLTQTYQLFSRVKGGQQILLQHWSEYIKNFGT
TIVVNPEKDKDMVQELLDFKDKVDHIIEVCFQKNEKFINLMKESFETFINKRPNKPAELI
AKYVDSKLRAGNKEATDEELERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASV
DAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDVMVQFKQYMQNQSDPGNIDLTVNILT
MGYWPTYTPMEVHLNSEMIKLQEVFKTFYLGKHSGRKLQWQTTLGHAVLKAEFKEGKKEF
QVSLFQTLVLLMFNEGDEFSFEEIKMATGIEDSELRRTLQSLACGKARVLIKNPKGKDVE
DGDKFIFNGDFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKT
LGHNLLVSELYNQLKFPVKPGDLKKRIESLIDRDYMERDKDNPNQYHYVA
NT seq 2313 nt   +upstreamnt  +downstreamnt
atggcggacgaggcgcagaagaagccgcacttgtcggcgctggtggggcacaccaacggg
ctcaccaagctcgccgccaccgccagcagcagcagccggggaggggggggaggaggagga
ggaggaggaggctccgccaccaccgccccgtccaagaaactggtcatcaagaacttcaga
gaaaggcccaagctgcccgataactacacgcaggacacctggcagaaacttcacgacgcc
gtgggggccatccagagcagcgtttccatccgctacaacctcgaggagctctaccaggct
gttgaaaatctctgttcttacaaagtctctgctacactgtacaaacagctgcgacaagtc
tgtgaagatcacgtgaaagcacaaattcttcaatttagagaagattctctggatagtctt
ttatttttaaagaagataaataaatgctggcaagatcactgcagacaaatgatcatgatc
agaagcattttcttatttctggatcgcacatatgtacttcagaattcaatgcttccttct
atatgggatatggggctagagttatttagaaaccatgtcattagtgataagcaagttcaa
aacaagactattgatggaatccttctgctgattgaacgagaacgaagtggtgaagctgtg
gacagaagtttgctgcgaagtttgttgagcatgctgtctgatctgcaggtttacaaggaa
tcatttgaacagaggtttctggaagagacaaattgcttatatgctgcagagggccaaaga
ttaatgcaagaaagagaggttccagaatatcttcaccacgttaataaacgtttggaagaa
gaaggagacagagtgataacatacttagaccacagcacacagaaaccactgatagcttgt
gtggagaaacagctactaggagaacacttaacagctattttgcaaaaagggcttgataac
ctgcttgatgaaaacagaatatcagacttgacccagacgtaccagctgttcagccgggta
aaaggggggcagcagatccttttgcaacattggagtgaatacatcaagaactttgggaca
acaatagtggttaatcctgaaaaggacaaggatatggtgcaagagctactagattttaag
gataaagtggaccatatcatagaagtgtgctttcagaaaaatgaaaaatttataaacttg
atgaaggagtcctttgaaacatttatcaacaagagaccaaataagcctgcagaattgata
gcaaaatatgtggattccaaattaagagctggtaataaagaagcgacagatgaagagttg
gaaagaatccttgacaaaatcatgatcatatttagatttattcatggtaaagatgtgttt
gaggcattctataagaaggacttggcaaaaagactgctggttggaaaaagtgcatcagta
gatgctgagaagtccatgttgtcaaagcttaaacacgaatgtggggctgcttttaccagc
aaactggagggcatgttcaaggacatggaactgtcaaaagatgtcatggttcagtttaag
cagtatatgcagaaccaaagtgacccaggaaatatagacctgacagtaaatatattaact
atgggatattggccaacttatacacctatggaagtccacttaaattcagagatgataaag
cttcaagaggtgttcaaaaccttttatctaggaaaacacagtggtcgaaagcttcagtgg
cagaccactttagggcatgctgtcctgaaggcagaatttaaggaaggaaagaaagaattt
caagtatcactctttcagacattagtgctgcttatgttcaatgaaggagacgaattcagt
tttgaagagattaaaatggccactggtatagaggacagtgaattaagaagaaccttgcaa
tctttagcttgtgggaaagcgcgagtattgattaaaaatccaaagggcaaggatgtagaa
gatggagacaaattcatctttaatggtgatttcaagcataagttgtttagaataaagatc
aatcaaatccagatgaaagaaacagtcgaggaacaggttagcacaactgaaagagtattc
caagacagacaataccagattgatgctgctattgtacgaataatgaagatgagaaagact
ctcggtcataatcttcttgtttctgaattgtataatcaactgaaatttccagtgaagcct
ggagacttgaaaaagaggattgagtctctcattgacagggactatatggagagagacaaa
gacaaccccaatcagtaccactatgttgcataa

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