Anas platyrhynchos (mallard): 101797106
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Entry
101797106 CDS
T02816
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101797106 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apla03019
]
101797106 (FIP1L1)
Messenger RNA biogenesis [BR:
apla03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
101797106 (FIP1L1)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
101797106
NCBI-ProteinID:
XP_027312884
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Position
4:complement(48708382..48752509)
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AA seq
560 aa
AA seq
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MSTGEVERLAADLGGGPGDEEEEWLYGDENEAERPEEEKSSVPPPPGSEEEAAENGVAKT
KVTEAEDDSDSDSDDDEDDVQVTIGDIKTGAPQYSYGAAPVNLNIKTGGRAYSSSSGVKV
KGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRIR
MGLEILPVTSTTNKITAEDNAMEVTPSAEILDGRYHLFKVQQGRTGNLEKELAVQSTKAD
FTSPPALLKSGIPTNRRLSGTIDVIGQTITISRVEGRRRANENSNIQVLSERSNPEVDNF
TKPPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPVSLNSWKSGIPITVPPPGFPPP
PGGPPPSLIPTIESGHSSGYDSRSVRAFSYGSVTFPHLAGSAPSWSSLMDSSKQWDYYAR
REKDRERERERSRDRDRDRDRDRDRERTRDRERDRDHSPTPSVFNSDEERYRYRDYAERG
YDRHRTSREKDDRHRERRHREKEETRHKSSRSNSRRRHDSEEGDSHRRHKHKKSKRSKEG
KEASSEPAPEQENTEAAPVE
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccggcgaggtggagcggctggcggcggacctcggcgggggccccggggacgag
gaggaggagtggctctacggcgatgaaaatgaagcagagaggccagaagaagaaaaatct
agtgttcctcccccacctggaagtgaagaagaagccgcagaaaatggcgttgcgaaaacg
aaggtgaccgaggctgaggatgacagtgatagtgatagtgatgatgatgaagatgatgtt
caagtcaccataggagatattaaaacgggagctccacagtacagttacggagcagctcct
gtgaatctcaatattaagacaggaggacgagcttattcatcttcttctggtgtaaaagtt
aaaggggtggatctagatgcaccagggagtattaatggcgtgccacttctggaagtagat
ttagactcttttgaagataaaccttggagaaagccaggggctgatctctctgattacttc
aactatgggttcaatgaagatacctggaaagcttactgtgaaaaacaaaagagaatacga
atgggtcttgaaattttaccagttacctcaaccacaaataaaattacggctgaagacaat
gctatggaagtaacaccaagtgcagagattctcgatggcagataccatctttttaaggta
cagcagggcagaactggaaatttggagaaagagttggcagtgcagtcgaccaaagctgat
ttcacatctcctcctgccttactcaaatcaggaattccaacaaacaggcgattatctggc
acaatagatgtgattggacagaccatcactatcagcagggtggaaggacgacggcgtgct
aatgaaaacagcaacatacaggttctttcagaacgatctaatcctgaagtagacaatttt
accaagccacctccatttttccctccaggagctccacctacccaccttccaccacctcct
ttcctcccaccccctccaactgtcagtactgctccacctctgattcccccaccagtatct
ctgaattcttggaagtctggtataccaataacagtaccaccaccaggctttccaccacca
cctggcggtcctccaccttccctcatacccacgatagaaagtggacattcctctggctat
gacagtcgttctgttcgtgcattttcatatggcagtgtcacctttccgcaccttgcaggt
tctgctccttcatggtctagtctcatggatagcagcaagcagtgggattactatgcacgg
cgagagaaggatagggagcgggagagagagcgatctcgagatcgggaccgcgaccgggac
cgagacagagaccgagaacggaccagagacagagagcgggaccgagatcacagcccgact
ccaagcgtgttcaacagtgatgaagaacgatacagatatagagactacgcagaaagaggc
tatgaccgccatagaacaagcagagagaaagatgaccgacacagagagcggagacacaga
gagaaagaagagactagacacaagtcatctcgaagtaacagcagacgccgccatgatagt
gaagaaggggatagccacagaaggcacaaacacaaaaaatccaaaagaagcaaagaagga
aaagaagccagcagtgaacctgctcctgaacaggaaaacactgaagctgcccctgtggaa
tag
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