Anas platyrhynchos (mallard): 101797115
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Entry
101797115 CDS
T02816
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101797115 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apla03019
]
101797115 (CNOT10)
Messenger RNA biogenesis [BR:
apla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101797115 (CNOT10)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_17
DUF6058
TPR_7
TPR_MalT
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
101797115
NCBI-ProteinID:
XP_038031000
Ensembl:
ENSAPLG00000008609
EnsemblRapid:
ENSAPLG00030015230
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All DBs
Position
2:complement(120943127..120971171)
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AA seq
744 aa
AA seq
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MAADKAADQGTEKHEGAGTSGITDQEKELSSSALQAFLAGNYDACLQHLNTLQDINKDDY
KITLNTAVAEFCKSNQTTTDNLRQTLNQLKNQVHSAVEEMDGLDDVENSMLYYNQAVILY
HLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYLLTYQAEKALHLLAVLEKMISQ
GNNNSKNGKNESGNNTNKDSSNQKAESGALIEVAKSKIHQYKVRAYIQMKSLKACKREIK
SVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSANIAEHPGFMKTGECLRCMFWNNLG
CIHFAMGKHNLGIFYFKKALQENDNACAQLGTGSSDPGKKFSGRPMCTLLTNKRYELLYN
CGIQLLHIGRPLAAFECLIEAVQVYHSNPRLWLRIAECCIAANKGTSEQETKGLPSKKGI
VQSIVGQGYHRKIVLASQSIQNVVYNDGQSSAIPVASMEFAAICLRNALLLLPEDQQESK
QENGSKTSNQLGGNAENSESSEACSNKSHEGDKFIAAPPSSPLKKQELENLRCSILACSA
YVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVT
DVSLGISSNEQDQGSDKGENEAMESSGKQTPQCYPSSVTSARTMMLFNLGSAYCLRSEYD
KARKCLHQAASLIHPKEIPPEAILLAVYLELQNGNTQLALQIIKRNQLLPSVKTLSDMRK
KPVFQPVHSIQPIQMPAFTTVQRK
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggacaaggccgcggatcaaggtactgagaaacatgaaggagcaggtacttca
gggattaccgatcaggagaaggagctgtcgagcagtgcactacaagcttttctggctgga
aattatgatgcttgtttgcaacacctaaatacccttcaagacataaacaaagatgactac
aaaataacactgaatactgctgttgcagagttctgtaaaagtaaccagactacaacagac
aatttgaggcaaacccttaaccagctgaagaaccaggttcactctgctgttgaagaaatg
gatggtttagacgatgttgaaaatagtatgctttattacaatcaagctgttattttgtac
catctgcgtcagtacactgaagctatatcagttggagagaagctgtaccagtttatagag
cctttcgaagagaagtttgcacaagctgtgtgcttcttgcttgtggacttgtacctgcta
acttaccaagctgagaaagccttgcatctgcttgctgttctggaaaaaatgatttcacag
ggcaataataacagcaagaatggaaaaaacgagtcagggaataatactaataaagactcc
tctaaccaaaaagctgaaagtggagctttaatagaagttgctaaatctaagatacatcag
tataaggtgagagcctatatccagatgaagtcactaaaagcatgcaaaagggagatcaag
tctgttatgaatacagctggaaactcagctccttctctctttcttaagagtaattttgaa
tatttgaggggcaattaccgtaaagcagtcaaacttttaaacagtgcaaacattgctgaa
catccaggcttcatgaaaacaggtgaatgcttaaggtgcatgttctggaacaatcttggc
tgcatccactttgctatgggaaagcacaatttaggaattttttacttcaaaaaagcctta
caggaaaatgataatgcatgtgcgcagctaggaacaggtagctcagatccaggtaaaaaa
ttttcagggaggcccatgtgtacgctgctgaccaacaaacggtatgagttgctctacaac
tgcggaattcagctcctgcatatcgggaggcctttagctgccttcgaatgcctgattgag
gcagtccaggtttatcactcaaaccctcgcctttggctgaggatagctgaatgctgcatt
gctgccaacaaggggacttcagaacaagagactaaaggtcttccaagcaaaaagggaatt
gtgcaatctatagtaggtcaaggctaccaccgtaagatagtcctggcgtcccagtcaata
cagaatgttgtttataatgatgggcagtcttcagcaatacctgtagccagcatggaattt
gcagcgatatgtctaagaaatgccttgctgttacttccagaagaccagcaggagtcaaag
caagaaaatggctctaaaactagtaatcagctaggtggaaatgcagaaaacagtgaaagc
agtgaagcatgcagcaataaaagtcatgaaggggataaattcattgcagctccaccttct
tcgcctttgaagaaacaggaattagaaaacttaaggtgctcaatacttgcctgtagtgct
tacgtggctctggctttgggtgataacctcatggcactgaatcacgcagataaactcctt
cagcaaccaaagctgtcagggtctcttaagtttcttgggcatttgtatgcagcagaagct
ctcatctctctagacagaatatctgatgccatcactcacttgaaccctgagaacgtcact
gatgtttccctcgggatctcttcaaacgaacaggatcaagggtctgacaaaggagagaat
gaggcaatggaatcttctggcaagcagaccccacagtgctatcccagttcagtcacatct
gcacgaacaatgatgttgttcaacctcggaagtgcttactgcttgaggagtgaatatgac
aaagctcgaaagtgtctccatcaggctgcttcattgatccaccccaaagagatccctcca
gaggctattctgctggctgtatatcttgaactacagaatggtaacactcagctggcgttg
cagatcatcaagagaaaccagcttctcccctccgtgaaaacactctctgacatgcggaag
aagcctgtttttcagccagtccattcaatccagcccattcagatgcccgctttcaccact
gttcaaaggaagtga
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