Anas platyrhynchos (mallard): 101797117
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Entry
101797117 CDS
T02816
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
apla04121
]
101797117 (PDZRN4)
Enzymes [BR:
apla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101797117 (PDZRN4)
Ubiquitin system [BR:
apla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
101797117 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
zf-rbx1
Prok-RING_4
TRAF3_RING
PDZ_Tricorn
Sina_ZnF
RING_XB3-XBAT31
IBR_1
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
101797117
NCBI-ProteinID:
XP_027312924
Ensembl:
ENSAPLG00000011265
LinkDB
All DBs
Position
1:30730395..30974624
Genome browser
AA seq
1024 aa
AA seq
DB search
MGFDPERFAAPVAAELQCKLCGRVLEEPLATPCGHVFCAGCLLPWAARRGRCPLRCRPLA
PADLRPVLPLRSLVQKLEVKCDYSPRGCRRVLRLRELPAHLAACRYGPPAARPPGPEEGG
PPGTPRPAEGHRRPRALRGGGPEPGPGPEPRREAVSWSRREKALLAQLWALQSEVRLTAL
RYQAKFGQYMSHISSITRDLTGGRRGGAGEPKPLTIMLHRENDTLGFNIIGGRPNQNNQE
ESAEGIYVSKILENGPADKAEGLQIHDKIIEVNGKDLSKATHEEAVEAFRNAKEPIVVQV
LRRAPISKAQGSSQDVRLVDACTQTDITFEHIMALAKLRPSTPPVPDICPFLLSDSCHSL
HPAEHEFYEGNEYLSSLPADADRTEDFEYEEVELCRISSQEKLGLTVCYRTDDEEDTGIY
VSEVDPNSIAARDGRIREGDRILQINGQDVQNREEAVALLSSDECKKIVLLVARPEMQLE
EGWLDDERNEFLEELNLEMLEEQHNEAMQYTANEVEQPKKHEEEDGTTDTATSSSNNHEK
DSGVGPTDESLRNDESSEQENAPEEQNSATLQCKRELGHSQDTLGSVELQCNESFLSGEY
IESDFIGNPEEECERFRQLLELKCKIRNHGEYDLYYSSSTIECNRREQDGVEHELQLLNE
ELRNIELECQNIMQAHRLQKVRDQYGDIWALHDEGFRNYNTSIDVQRGKLDDIMEHPEKS
DKDSSSAYNTAESCRSTPLTVERSPDNSLQRMISITNRKNLRSTVVANQSSSGQSNKETT
SAKKPTEQNSAAEDTMLASESGKFTDQEKQSTEHIPYLSPYHSSSYRYGNIPAHAKHYQS
YMQLIQQKSAVEYAQSQLSLVSMCKDSQKCAEPKMEWKVKIRSDGTRYITKRPVRDRILK
ERALKIKEERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLECLK
ESPQSGSEGKKEINIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLS
VTTV
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgacccggagcgcttcgcggcgccggtggcggcggagctgcagtgcaagctg
tgcggcagggtgctggaggagccgctggccacgccgtgcggccacgtcttctgcgccggc
tgcctgctgccctgggcggcgcggcgggggcgctgcccgctgcgctgccgcccgctggcg
cccgccgacctgcgcccggtgctgccgctccgcagcctggtgcagaagctggaggtcaag
tgcgactacagcccgcggggctgccgccgcgtcctgcggctgcgggagctgcccgcacac
ctcgcggcgtgccgctacgggcccccggctgcgcggccccccggcccggaggagggcggc
ccccccgggactccccggccggccgaggggcaccggcgcccgcgggcgctgcggggaggc
ggcccggagccggggccggggccggagccgaggagggaggccgtgagctggagcaggagg
gagaaggcgctgctggcgcagctgtgggcgctgcagagcgaggtgcggctcacggcgctg
cgctaccaggcgaagttcggccagtacatgagccacatcagcagcatcacccgcgacctg
acgggcggccggcgcggcggggcaggagaacccaaaccattaacgatcatgctacacaga
gaaaatgatactttgggattcaatattataggaggacgacccaatcagaacaatcaagag
gaatctgctgagggaatttatgtgtcaaaaattttggaaaatggacctgcagacaaagca
gaaggccttcaaattcatgacaagattattgaggtcaatgggaaggacctctccaaggcc
actcatgaagaggcagtggaagcttttcgcaatgccaaggagccaattgtagttcaagtt
ttacgacgagctccaattagcaaagctcaaggtagctctcaggatgtacgtcttgtggat
gcctgcactcagactgacatcacttttgagcacattatggctctggccaaactaaggcct
tccacaccaccagttcctgatatctgcccttttctactttcagacagctgccattctctt
cacccagcggagcatgaattttacgaaggtaatgagtatctttccagcctgcctgctgat
gcagatagaacagaggactttgagtatgaggaggtggagctgtgccgcattagcagccag
gagaagctggggctgactgtctgctacagaactgacgacgaggaagacacggggatctac
gtcagtgaggttgatccaaacagcattgctgccagagacggacggatccgtgaaggagac
cgtattttgcaaattaatggccaagatgtccagaatcgggaagaggcagtagcattgctc
tccagcgatgaatgcaagaaaattgtgttgctggtagcaagaccagagatgcagctggag
gaagggtggctggatgatgaaaggaatgaattcttggaggagttgaacttagaaatgctg
gaagagcagcataatgaagcgatgcagtacacagccaatgaggtggagcagccaaagaaa
catgaggaagaggatggaactacagacactgcaacctcatcatccaacaatcatgaaaag
gacagtggggtgggacctacagatgaaagtttgcgtaatgatgagagctcagagcaagaa
aatgcacctgaggagcagaacagtgctaccctgcagtgcaaacgggagctgggtcacagc
caagatacgttaggaagtgttgagctccagtgcaatgaaagctttttatcaggggaatac
atcgagtctgatttcatagggaacccagaggaggaatgtgaaaggtttcgacagctgctg
gaactgaagtgcaaaattcgaaaccatggggagtacgacctgtattactcgagcagcaca
atagagtgcaacagaagagagcaagatggagtggagcatgagctgcaactgctcaatgag
gaactgaggaatattgaactcgaatgtcagaatattatgcaagctcaccgactccaaaag
gtgagggatcagtacggagacatttgggctttacatgatgaagggttcaggaattacaac
accagcatagacgtgcaaagaggcaaactagatgacatcatggagcaccctgagaagtct
gacaaggacagctccagtgcctacaacacagcagaaagttgcaggagcactcccctgact
gtggagcgatcccctgacaactctctccagcggatgatcagcatcaccaacaggaaaaac
ctgaggagcacagttgtggcaaatcagtcatcctcaggacaaagcaacaaagagacaacc
tcagccaaaaaacccactgaacaaaacagtgctgctgaagacaccatgctggcatcagaa
agtggcaaattcacagaccaagaaaagcagagcactgagcacattccctacttgtctcca
tatcacagctcttcttacaggtatgggaatatacctgctcatgcaaaacattatcaaagc
tacatgcagctgatccagcagaagtcagccgtggagtatgcccaaagccaactcagcctg
gtgagcatgtgcaaagactcacagaagtgtgcggagcccaagatggaatggaaagtgaaa
ataaggagcgatgggacgaggtatatcacaaagagaccagttcgagacagaatcctgaag
gaacgtgccttaaaaattaaagaggagcgcagtggaatgacgacagatgatgatacaatg
agtgagatgaagatgggtcgttactggagcaaagaagagaggaagcagcatttggtgcga
gctaaggagcagaggaggcgacgggagttcatgatgcgtagcaggctggagtgtctcaag
gaaagtccgcagagtggcagcgagggcaaaaaggaaattaacattattgaactgagtcac
aaaaagatgatgaaaaagagaaacaagaaaatcttggacaactggatgacaatccaagaa
ctgatgacacatggtgctaaatctccagacggcacaagagtgcacaatgcctttttatca
gttactactgtatga
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integrated database retrieval system
