Anas platyrhynchos (mallard): 101797624
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Entry
101797624 CDS
T02816
Symbol
COL23A1
Name
(RefSeq) collagen alpha-1(XXIII) chain isoform X1
KO
K24355
collagen type XXIII alpha
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
apla00536
]
101797624 (COL23A1)
Glycosaminoglycan binding proteins [BR:
apla00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101797624 (COL23A1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
101797624
NCBI-ProteinID:
XP_038042580
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Position
14:complement(4637981..4801162)
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AA seq
654 aa
AA seq
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MSAAGGAGTAAGTATSALCLLLSLTAVAVCLLLGAKTAELQGRLAALEERGAAGPGPLLE
ALQPRLEQLLREKLGEGLAKLRTAREAPSDCMCPPGPPGRRGKPGRRGEPGPAGQSGRDG
YPGPLGLDGKPGPPGPKGEKGEAGDIGPRMVFPHLNHGFLANDQLVFSRRVLKGDQGREG
ATGPPGPPGPPGARGPPGDTGKDGPRGPPGPPGFKGDPGEDGLMGARGPPGPKGEPGMQG
KKGDDGIPGEPGLMGSKGEKGSPGPKGENGTDGAPGPKGEPGEKGGIGSIGPRGPPGLKG
EQGDTVVIDYDGRILDALKAAGIHKVMGSPGPPGPPGPPGAPGPKGELGLPGPPGLDGEK
GPKGAKGDQGSAGTAGQKGETGEMGLSGPPGADGPKGDKGDTGSPCLQNNHIIPEPGPPG
LPGPMGPPGIQGPKGLDGAKGEKGDSGEKGEHGDPGPAGLPGAPGLIGLPGTKGEKGKPG
EPGLDGFPGLRGEKGEKSERGEKGERGIPGRKGAKGQKGEPGPPGLDQPCPVGDRSISGS
QGEPGLPGLAGVSVPCPLGPDGLPVAGCWHKSEKNLAENEEEKKATALGMEAAAVCQQTG
RGNNAKLPASLACPCDGPSEPLAECNKRDCLRISAPVKESFYPKRKRLRVLAWG
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggccggaggagccggcaccgcggcgggcaccgccacctccgccctctgcctg
ctcctctcgctcaccgccgtggccgtctgcctgctgctgggagccaaaacggcggagctg
cagggccgcctggcagccctggaggagcgcggagccgccggtcccggcccgctgctggaa
gcgctgcagccccgcctggagcagctcctccgagagaaactgggtgaaggcctagctaag
ctgcggacagcgagagaggctccgtcagactgcatgtgccccccaggccctccggggagg
cgaggaaagcccggacggcgcggagagcccggacctgcagggcagtcaggacgcgatggt
tatccggggccccttggcttggatggcaaaccaggacctccaggaccaaaaggggaaaag
ggtgaagcaggggacatcggcccaaggatggtttttccccacctcaatcacggatttctg
gctaacgatcagcttgtctttagccggcgagtgctcaagggcgatcaaggtcgagaagga
gccactggcccccctggtccgccaggacccccaggtgcccgggggcctcctggtgacaca
ggaaaggatggcccaagaggacctccaggcccccctggttttaaaggcgacccaggagag
gatggcctcatgggcgccaggggacccccagggccaaagggtgaacctggcatgcaaggg
aagaagggtgatgatggcatcccaggggaaccaggacttatgggctctaagggagaaaaa
ggaagcccaggtccaaagggagagaatggcacagatggtgcgccaggacccaagggtgaa
cctggcgagaagggtggaattggctccatcggaccacggggtccccctggcctgaagggg
gaacagggcgacaccgtcgtgatcgactatgatggccggatcctggatgcactcaaggct
gcagggatacacaaagtgatgggttcgccgggtcccccggggccgccaggcccgccaggt
gctccaggccctaagggggagctgggcctgccgggtccgcctgggctagatggcgaaaag
ggtcccaaaggagctaagggtgaccaaggcagcgcagggactgcaggacaaaaaggagag
acgggagaaatgggcttatcgggcccaccaggagcagatgggccaaaaggagacaaagga
gacactggatcgccgtgtttgcagaataaccatatcatcccggagccaggaccccccgga
ttgcccggccccatgggtcctccaggaatccaggggcctaaaggtttggatggtgccaag
ggagagaagggggatagcggtgagaagggggagcacggcgacccgggaccggctggtctc
cctggtgccccagggctcattggcttacccggtaccaaaggagagaagggaaagccgggg
gagccaggactggatggtttcccaggactcagaggagagaaaggagagaagagtgaaaga
ggggagaagggtgagcgaggaatcccagggagaaaaggagccaaagggcagaagggggaa
cctggccctcctggactggatcagccctgccccgtgggagatcgtagcatttcgggcagc
caaggggagccaggcttgccaggcctggccggggtgagcgtgccctgcccgttgggacca
gatggactgccagtagcgggatgttggcataagagcgaaaaaaacctggctgaaaacgaa
gaagaaaaaaaggccacagccctaggtatggaagcagctgctgtgtgccagcaaactggc
agaggaaacaacgccaagctccctgcatcgctagcctgcccttgtgatggacctagcgag
cctctggcggaatgcaacaagcgggactgcctgcggatctctgctcctgtcaaggaaagc
ttctatcccaaaaggaagcgcctccgggtcctggcctggggctga
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