Anas platyrhynchos (mallard): 101797655 Help Entry 101797655         CDS       T02816                                  Symbol PRPF19 Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism apla  Anas platyrhynchos (mallard) Pathway apla03040   Spliceosome apla04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:apla00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     101797655 (PRPF19)   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     101797655 (PRPF19)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:apla03041]     101797655 (PRPF19)    04121 Ubiquitin system [BR:apla04121]     101797655 (PRPF19)    03400 DNA repair and recombination proteins [BR:apla03400]     101797655 (PRPF19) Enzymes [BR:apla01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      101797655 (PRPF19) Spliceosome [BR:apla03041]  Complex B   Other components    Prp19 complex     101797655 (PRPF19)  Complex C    Prp19-CDC5 complex     101797655 (PRPF19) Ubiquitin system [BR:apla04121]  Ubiquitin ligases (E3)   U-box type E3    101797655 (PRPF19) DNA repair and recombination proteins [BR:apla03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     101797655 (PRPF19) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40_Prp19 WD40 WD40_WDHD1_1st Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_TEP1_C NBCH_WD40 Beta-prop_HPS5 U-box Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_IFT122_1st WDR90_beta-prop_4th PEP5_VPS11_N Beta-prop_RIG_2nd Beta-prop_WDR19_1st WD40_RFWD3 PROPPIN Beta-prop_SPT8 Beta-prop_Nup120_160 Cytochrom_D1 Ge1_WD40 Beta-prop_DCAF12 RMC1_N zf-Nse Beta-prop_WDR35_TULP_N DUF1830 ATG16 GP3 Cep57_MT_bd Motif Other DBs NCBI-GeneID:  101797655 NCBI-ProteinID:  XP_027314188 UniProt:  A0A8B9QQX5 LinkDB All DBs Position 5:complement(30647492..30651726) Genome browser AA seq 504 aa AA seqDB search MALICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPVNNQPLSEEQLIDIKVAHP IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL TKEVTAAREALATLKPQAGLIVPQTVPSSQPNVAGAGESMDLGELAGMTPEIIQKLQDKA TVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTG GADKNVIVFDKSSEQILATLKGHSKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQ VVRAHEGSVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDESSGCALTCAQFHP DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD LRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLTTG VAFGHHAKFIASTGMDRSLKFYSL NT seq 1515 nt NT seq  +upstreamnt  +downstreamnt atggccctcatctgctccatctccaacgaggtccccgagcacccgtgcgtgtcgcccgtc tccaaccacgtctacgagcggcggctgatcgagaagtacatcgcggagaacggcaccgac ccggtcaacaaccagccgctgtccgaggagcagctcatcgacatcaaggtcgcccacccg atccggcccaagcctccgtccgccaccagcatcccggccatcctgaaggcgctgcaggat gagtgggacgccgtcatgctgcacagcttcaccctgcgccagcagctgcagaccacgcgc caggagctgtcccacgcgctctaccagcacgacgccgcctgccgtgtcatcgcccggctc accaaggaggtcaccgccgccagagaagctctggcaacgctgaagcctcaggctggcctc atcgtgccccagaccgtgccgtcctcccagcccaacgtggcgggagctggggagtccatg gacctgggagagcttgccggcatgacccccgagatcatccagaagcttcaagacaaggcc acggtgctgaccacggagcgtaagaagagaggcaagacggttccggaggagctggtgaag ccggaggagctcagcaagtaccggcaggtcgcgtcgcacgtggggctgcacagtgccagc atcccggggatcctggccttggacctctgtccttccgacaccaacaagatcctcaccggc ggggctgataaaaacgtcatcgtcttcgacaagagctcagagcagatcctggccacgctc aagggccactccaagaaggtcaccagcgttgtgttccacccctcgcaggagctggtgttc tcggcttctcccgacgctaccatcaggatctggtctgtgcctaacgcctcctgcgtgcag gttgtgcgtgcccacgagggctccgtgaccgggctgagtctgcacgccacgggtgactac ctgctcagctcttctgatgaccagtactgggctttctcggatatccagaccggccgtgtc ctcaccaaggtgacagacgagagctctggctgtgctctcacctgcgcccagttccacccg gacgggctcatttttgggacagggacgatggactctcagatcaagatctgggatctgaag gaacgcaccaacgtggccaacttcccggggcactcgggccccatcaccagcatcgccttc tccgagaacggctactacctggccacagccgcagatgactcctccgttaagctctgggac ttgcgtaagctcaagaacttcaagacgctgcagctggacaataacttcgaggtgaagtct ctcatctttgaccagagcggcacctacctggcgctgggcgggacggacgtccagatctac atctgcaagcagtggacagaaatcctccacttcactgagcacagcggcctcaccacggga gtggctttcggccaccacgccaagttcatcgcctccacgggcatggaccggagcctcaag ttctacagcctgtag

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