Anas platyrhynchos (mallard): 101797682
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Entry
101797682 CDS
T02816
Symbol
SSU72
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72
KO
K15544
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:
3.1.3.16
]
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101797682 (SSU72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apla03021
]
101797682 (SSU72)
03019 Messenger RNA biogenesis [BR:
apla03019
]
101797682 (SSU72)
Enzymes [BR:
apla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
101797682 (SSU72)
Transcription machinery [BR:
apla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101797682 (SSU72)
Messenger RNA biogenesis [BR:
apla03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
101797682 (SSU72)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssu72
Motif
Other DBs
NCBI-GeneID:
101797682
NCBI-ProteinID:
XP_027299101
Ensembl:
ENSAPLG00000008354
LinkDB
All DBs
Position
22:complement(3788798..3815332)
Genome browser
AA seq
194 aa
AA seq
DB search
MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTT
YDQMYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQNCKDIFDLILTCEERVYDQVV
EDLNSREQETCQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFE
EKSGRTFLHTVCFY
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcctctccgctccgtgtggccgtcgtgtgctccagcaaccagaatcgcagcatg
gaggcgcacaacatcctcagcaaacgaggattcagtgtccgatcctttggaacagggact
cacgtgaaactgccaggaccagcaccggacaagccaaatgtttatgatttcaaaacaaca
tatgatcagatgtacaatgatctgcttaggaaagacaaagaactatacacacagaatggg
attttacatatgttggacagaaataagagaatcaagccacgaccagagagattccagaac
tgcaaagacatttttgatttgattctaacgtgtgaagaaagagtctatgatcaagtagta
gaagatttaaattccagagaacaggagacatgtcagccagtacacgtgatcaatgtggac
attcaggataaccatgaggaggcaaccctgggtgctttccttatctgtgagctctgccag
tgtatacagcacacagaagacatggaaaatgaaatagatgagctgttacaggaattcgaa
gagaaaagtggaaggacttttcttcatactgtctgcttttattaa
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integrated database retrieval system
