KEGG   Anas platyrhynchos (mallard): 101798080
Entry
101798080         CDS       T02816                                 
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1
  KO
K14315  nucleoporin NDC1
Organism
apla  Anas platyrhynchos (mallard)
Pathway
apla03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:apla00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101798080 (NDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:apla03019]
    101798080 (NDC1)
Messenger RNA biogenesis [BR:apla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     101798080 (NDC1)
SSDB
Motif
Pfam: Ndc1_Nup GP41
Other DBs
NCBI-GeneID: 101798080
NCBI-ProteinID: XP_027318671
Ensembl: ENSAPLG00000002028
LinkDB
Position
8:complement(26875609..26893555)
AA seq 742 aa
MTGSAQCTAGPCSPPRPLSPLPPGRAPPLAAAFPLISRRAPRRKPPQRSAEGGGGRFERR
RGRPGPAMEAAAAASCRQRALLRQVLGWRLAAAVAWSVLLLPACTAAFVLLGRAQPLRPL
RWIADSFNDLYTSYVIFCILLMSVVILVISIFNVEFYAVVPSIPCSRLALIGKIIHPQQV
IHSAVHAVMGMLVAWCAAVMTKGKFQFLAVPCTPSESPENAVPQMCLNEYHLFFLLSGAF
IGYSYSLLYLINNMNYLPFPIIQQYKYLRFRRSLPLLVKHSCAESLYLVRNFCVAYYFFG
YIPKVWISTTMDLHIDSKLHPLDTLSGLLDLSLFYHTWLCGAFLLITWYIAWLLFKIYAT
ETHHFPVQPTFAEETDQCLPKILNSNPPLIIKFLALQDLMLLSQYSPVRRQEVFSLSQPG
GHPHNWTAISRECLSLLTDLTQRLIAQQEAAAANGRAKQQAGEMKVLPQTPGAAVTEDMP
FQSQRSNVIHRASMASLVKSPLMPSKTSPGSDIGSPFSSPALTSKVGILDLNSPWHGSVQ
SPHVMRRGPKLWTSGSGLQMNGSHHESFPVVSLARVGSEAVQPSFIYTWLQNKQEQIKNF
LSRRALIMYFFSKHPEASIQAVFSDAQMHIWALEGLSHLVAASFTEDQFGVVQTTLPAIL
NTLLTLQEVVDRHFKLPHVSSKPPRISGSLVDTSYKTLRFALRASLKTALYRITTVFGEH
LNAVQVSPEHKKRLQQFLEYKE
NT seq 2229 nt   +upstreamnt  +downstreamnt
atgacggggagcgcgcagtgcactgccgggccttgtagtcctccccgccccctctccccc
cttccccctgggcgcgctccccccctagcggccgccttcccgctcatttcccggcgtgcc
ccgcgccggaagccgcctcagcgctcagcggaagggggcggcggccgcttcgaacggcgg
cgcgggcggccgggcccggccatggaggcggcggcggcggcctcgtgccggcagcgggcg
ctgctccgccaggtgctgggctggaggctggcggccgccgtcgcctggtccgtgctgctg
ctgcccgcctgcaccgccgccttcgtgctgctcggccgagcgcagccgctccgcccgctg
cgctggatcgccgattccttcaatgatttgtatacttcctacgtcatcttttgtatcctc
cttatgtctgtggtgatactggtaataagcatcttcaacgttgaattctatgcagttgtg
ccatcgataccgtgctctcgattagcgctgataggaaaaattattcatcctcagcaagtt
atccattcagctgttcatgctgtaatgggaatgctggttgcttggtgcgctgcagttatg
acaaaagggaagttccagtttcttgctgtgccctgcacgccttcagaaagcccagaaaat
gctgttcctcagatgtgcttaaatgagtatcacctcttttttctgctttctggagctttc
attggatacagttacagcctcttgtatcttattaacaatatgaattatttgccatttcca
attatacagcaatacaagtacttacgtttcagaagatctttgcctctcctcgttaaacac
agttgtgcggaatcgctgtatttggtcagaaacttctgtgtcgcatattacttttttggt
tatatcccaaaagtatggataagtaccacaatggatcttcacatagacagtaaattgcat
ccccttgacactctgagtggcttactggacctctctttgttctaccatacctggctatgt
ggtgcatttcttctgattacctggtacattgcctggttgctcttcaagatctatgctaca
gagacacatcattttcctgttcagccaacttttgctgaggagacagaccagtgcctgcct
aaaatcttaaacagcaaccctcccctgattataaagttcttagccttacaagacttgatg
ttgctttcccagtattcccctgttcgacggcaggaagtctttagccttagtcagccaggt
gggcaccctcacaactggactgcaatatcaagggagtgtttgagtcttctaactgatctg
acccagcggctgatcgcacagcaggaagctgcagcagcaaatgggagagcaaaacagcaa
gcaggagagatgaaagtacttccacagactccaggagctgcggtgacagaagacatgcca
ttccagtcacagagatctaacgtcattcacagagcctccatggcatccctggttaaatcg
cctctaatgccttcaaagacatcacctgggtctgatattggctcaccttttagttcacct
gctttaacctccaaggtgggaattctggatttaaactcgccttggcacggatcagtccaa
agtcctcatgttatgagaaggggaccaaagctgtggacatcaggatcaggtctgcaaatg
aatggttcccaccacgaatccttcccagtggtctctcttgcaagagttggcagtgaggca
gtacagcccagctttatttacacatggcttcagaacaagcaagaacagataaaaaacttc
ttgtcaagacgagcgctgataatgtatttcttcagcaagcatccagaggcttccatccaa
gctgttttctccgatgcccaaatgcacatctgggcattggaaggtctgtctcatctggta
gcagcttcctttacagaagaccagtttggagttgttcaaactacactgccagctatcctg
aatactctactgacgcttcaggaggttgtagacagacacttcaaactgcctcatgtttcc
agcaaacctcccaggatctcgggaagtctggtggacacatcttacaaaacgctaagattt
gcacttagagcatctctgaaaacagcactgtaccggataactactgtctttggagaacac
ttaaatgcagtgcaagtgtctccagaacataagaaaagacttcagcagttcttggaatac
aaagaataa

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