Anas platyrhynchos (mallard): 101798164
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Entry
101798164 CDS
T02816
Symbol
POLRMT
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial isoform X1
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
apla03029
]
101798164 (POLRMT)
Enzymes [BR:
apla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101798164 (POLRMT)
Mitochondrial biogenesis [BR:
apla03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
101798164 (POLRMT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_3
Motif
Other DBs
NCBI-GeneID:
101798164
NCBI-ProteinID:
XP_038025069
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Position
29:complement(309256..324270)
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AA seq
1239 aa
AA seq
DB search
MALLRLRAALLGPGPLRGGGIPWSVLRTYSSVSAKEKARKNVVCERTELLEVLKARVKQL
QASPGPEVTVSKAELAPLRMGRQQEPPAPRQSAASPAQPSSWVEKLKREMYVRQAKVERK
LSIAASKMTLVGQANAKVKVKAVPSTKVKVKAVPNAKVKVKAVPKPKAKPKATKSPKETK
VAAWSQGHAGPSSACSKPEVVEVKQDVKAEKAPNVPEKRESNHQKIMQQTIQSNLECLLC
LQQPEEAERLLLLCHSSPMKRKLLTIGAYNIVMRSWARKGCLHRLNRVLSLLESAGLRPN
LDSYAAALECMGRGQACTKIIWRCVQQLKQDGFHVDELFQKCLFEGDEKETVLRAIRIVQ
PDYQLPPAPKPQTCKSALLDNFYSKEKVVSYPKLDFSVQELRERFQQQLEMELNSTITIQ
SVESTKPLTPQALRARKQLAALRAQWRGAILQALQKAKHNMSQKRTMSGYNSLYPYLCLL
PDEEYVDIMMQILNTLSPQGESLSVLARELGSKVYDRYLTQRKLHSRQLEKVQEIYQDYI
HLLAKDSQPGEYLPREYWEKLVAEAGYGPSLRLKDCSWPYVLLMRLGVYLLEILVHSVKV
PRNTLKPRLESRLIPVLYHIYSFRSSWQVGLIKPHPIFSQLVSDAAETTLTFSSSVMPML
CPPIPWTSPHFGAFVLSDTKLMRYVDGAFQHQQLLDQCPQVNLHPVLDALNQLGNCAWKI
NQPVLDIIISIFNDKGNEKLDIPPPLSEAPKPPVTPGNSSAWHKSQKHELLLCKKKAAEM
HSLRMDALYKLSIANHVRDKVFWFPHNMDFRGRTYPCPPYFNHLGNDVTRAILLFAEGRP
LGPKGLDWLKIHLINLTGLKKKNSLQERLGYANEIMEEILDSADRPLTGRKWWMNTDEPW
QVLACCMEIAQASRSPDPVAFVSHFPVHQDGSCNGLQHYAALGRDLIGAISVNLMPCSVP
QDVYSAVAQQVEEFRKKDAAEGLKIAQVLEGFISRKVVKQTVMTVVYGVTRYGGRLQIEK
RLKEIDEFPEEYLWEASHYLVRQVFNGIKEMFSATRDIQHWLTESAKLIAQSGQTVEWVT
PMGLPIVQPYYRVRSTVLNSNMQNLSVKSSANTNQKPDTVKQKNAFPPNFIHSLDSTHMM
LTALHCFRQGLTFVSVHDCYWTHALTVDVMNQICRQQFVALHSQKILQDLSKFMLKKYCS
PSEDSRAPWQKKLMEQLSSVPETGEFNLTKVMDSTYFFS
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgctgcggctccgggcggcgctgctgggcccgggcccgctgcggggcggcggg
atcccgtggagcgtcctcaggacctactcctccgtcagcgccaaggagaaggcgaggaaa
aatgtggtgtgtgagaggacggagctgctggaagtgctgaaagcccgagtgaagcagctc
caagcctcccccggccccgaggtgacggtgagcaaagcggagctggcaccgctgcggatg
ggcaggcagcaggagcccccagcccccaggcagagcgccgcgagcccggcccagcccagc
agctgggtggagaagctgaagagggagatgtacgtgcggcaggccaaggtggagaggaag
ctgtccatcgcggcctccaagatgactctggtgggccaggccaacgccaaagtaaaggtg
aaagcagttcccagcaccaaagtaaaggtgaaggcggttcccaacgccaaagtaaaggtc
aaggcagtgcccaagcccaaagccaaacccaaggccacgaagagccccaaggaaaccaaa
gtggctgcgtggagccagggccacgccggccccagcagcgcctgcagcaagcccgaggtg
gtggaagtgaagcaggacgtgaaagcagagaaagccccgaacgtgcctgagaaaagagaa
agcaaccaccagaagatcatgcagcagaccatccagtctaacctggagtgcctcctgtgc
ttgcagcagccggaggaggctgagaggctgctgctgctgtgtcacagctcccccatgaag
agaaagctgctgaccatcggcgcgtacaacatcgtgatgcgcagctgggcgagaaagggc
tgcctgcaccgcctcaaccgggtcctctccctgctggaatccgccggcctccgccccaac
ctggactcgtacgcggcggcgctggagtgcatgggccggggccaggcgtgcaccaagatc
atctggaggtgtgtgcagcagctgaaacaggacggcttccacgtggatgagctcttccaa
aagtgcctgtttgagggagatgagaaggagacggtgctgagggccatcaggatcgtgcag
ccggactaccagctgccccctgcccccaagccccagacctgcaaatctgctctgctcgac
aacttctactccaaagagaaggtggtgtcctaccccaagctggatttctctgtgcaggag
ctgcgggagcgcttccagcagcagctggagatggagctgaacagcaccatcaccatccag
tcggtggagtcaaccaaaccgctgaccccgcaggccctcagagcgcgcaagcagctggcc
gccctgcgcgcccagtggcgcggggccatcctccaggccctgcagaaggcgaagcacaac
atgtcccagaaaaggacgatgtcggggtacaacagcctctacccctacctgtgcctgctg
cccgatgaggagtacgtggacatcatgatgcagatcctcaacacgctctctccgcaagga
gaatccctgtctgtcctagccagggagctgggctccaaagtctacgacagatacctgacc
cagaggaagctgcacagccgccagctggagaaggtgcaggagatctaccaggactacatc
cacctgctggcgaaggacagccagcctggggagtacttgccacgggaatactgggagaag
ctggtggcagaagctggctacggcccttccctgaggctcaaggactgcagctggccgtac
gtgctcctgatgcgcctgggcgtgtacctgctggagatcctggtgcactccgtcaaggtg
cccaggaacaccctcaaaccccgcttggagtccaggcttatccccgtcctctaccacatc
tactccttccgcagcagctggcaggtcgggctgataaagccccaccccatcttctcccag
ctcgtgtcagacgccgcagagaccacgctgaccttcagctcctccgtcatgcccatgctg
tgccccccgatcccctggacttccccccactttggcgccttcgtgctgagtgacaccaag
ctgatgcgctacgtggacggggccttccagcaccagcagctcctggaccagtgcccccag
gtgaacctccaccccgtgctggacgccttgaaccagctgggcaactgcgcctggaagatc
aaccagccggtgctggatataatcatctccatcttcaacgacaaaggcaacgagaagctg
gacatcccgccgcccctctccgaggcccccaagcccccggtcacccccggcaattcctct
gcctggcacaagtcccagaagcacgagctgctgctgtgcaagaagaaggcggccgagatg
cacagcctgcgcatggacgcgctctacaagctctccatcgccaaccacgtgagggacaag
gtcttctggtttcctcacaacatggacttccgcggcaggacctacccttgcccgccgtac
ttcaaccacctgggcaacgacgtcacccgcgccatcctgctctttgcggagggcaggccg
ctgggcccgaagggcctcgactggctgaagatccacctcattaacctcacggggctgaag
aagaagaacagcttgcaggagcggctgggttacgccaacgagatcatggaggagatcctg
gactctgccgaccgcccgctgacgggcaggaagtggtggatgaacaccgacgaaccctgg
caagtcttggcgtgctgtatggaaatcgcccaagcctcgaggtccccggacccagtggcc
ttcgtctcccatttcccggttcaccaggacggctcttgcaacggcctgcagcactacgca
gccctgggccgggacctcatcggtgccatctctgtcaacctgatgccctgcagcgtcccc
caggacgtgtacagcgcggtggcccagcaggtggaggagtttcggaagaaggacgctgca
gaggggctgaagatcgcccaggtgctggagggcttcatcagccgcaaggtggtgaagcag
acggtgatgacggtggtgtacggcgtcacgcgctacggcgggcggctgcagatagagaag
cgcctcaaggagatcgacgagttccccgaggagtacttgtgggaagcatctcactacctc
gtgaggcaggtgtttaatggcatcaaggagatgttctcagccactcgagacatccagcac
tggctgacggagagcgccaagctcatcgcccagtcgggacagacggtggagtgggtcacc
cccatggggctccccatcgtgcagccctactatcgggtccggtccactgtgctgaattcc
aacatgcagaacctgagcgtgaagagctccgccaacaccaaccagaagcctgacacagtg
aagcagaaaaacgccttcccgcccaacttcatccactccctggactcgacgcacatgatg
ctcacggctctgcactgcttcaggcaggggctgaccttcgtctcagtccacgactgctac
tggactcacgcgctcactgtggacgtcatgaaccagatctgtcggcagcaattcgtggct
ctgcacagccagaagatcctgcaggatctgtccaagttcatgctgaagaagtactgcagc
cccagcgaagacagcagagccccttggcagaagaagctgatggagcagctgtcgagtgtc
cccgagacaggggaattcaacctgacgaaggtgatggattccacttatttcttcagctga
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