KEGG   Anas platyrhynchos (mallard): 101798240
Entry
101798240         CDS       T02816                                 
Symbol
RFC3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
apla  Anas platyrhynchos (mallard)
Pathway
apla03030  DNA replication
apla03410  Base excision repair
apla03420  Nucleotide excision repair
apla03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:apla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    101798240 (RFC3)
   03410 Base excision repair
    101798240 (RFC3)
   03420 Nucleotide excision repair
    101798240 (RFC3)
   03430 Mismatch repair
    101798240 (RFC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:apla03032]
    101798240 (RFC3)
   03036 Chromosome and associated proteins [BR:apla03036]
    101798240 (RFC3)
   03400 DNA repair and recombination proteins [BR:apla03400]
    101798240 (RFC3)
DNA replication proteins [BR:apla03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    101798240 (RFC3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    101798240 (RFC3)
Chromosome and associated proteins [BR:apla03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    101798240 (RFC3)
DNA repair and recombination proteins [BR:apla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     101798240 (RFC3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    101798240 (RFC3)
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA_lid_RFC1 Rad17 AAA AAA_22 ABC_tran Sigma54_activ_2 AAA_16 nSTAND6 AAA_2 DUF2247
Other DBs
NCBI-GeneID: 101798240
NCBI-ProteinID: XP_027325990
Ensembl: ENSAPLG00000010374
UniProt: A0A8B9R069
LinkDB
Position
1:complement(183295743..183306068)
AA seq 356 aa
MSLWVDKYRPGSLGRLDFHRQQAAQLRCLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GPGVEKLRIEHQSITAPSKKKIEISTIASNYHLEVNPSDAGNNDRVVIQELLKTVAQSQQ
LETSTQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMATCRLILCCNSISKIIAPIQSRCL
AIRVPAPSIEDICNVLSSVCKKEGLTLPQELAQRLAEKSGRNLRKALLMCESCRVQQYPF
TADQDIPEMDWEVYLRETANAIVSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLSELL
NNCDGQLKGEVAQMAAFYEHRLQLGSKAIYHLEAFVAKFMAIYKKFMEDGLDDMMF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagcctgtgggtggacaagtaccggcccggcagcctgggccgcctggacttccaccgg
cagcaggccgcgcagctccgctgcctggttcagtgtggtgacttcccccatctgttggtg
tatggaccgtcaggagctggaaagaagacgaggataatgtgtctgttacgggagttatat
ggtccgggcgtggaaaaactgaggatcgagcatcagagtataacggcaccttctaaaaag
aaaattgaaattagcacgattgcaagcaattatcaccttgaagttaacccaagtgatgct
ggaaataatgaccgtgtggtaattcaggaactcttgaagacagtagcacaatcccaacag
cttgagacaagtactcaacgtgacttcaaagtggtgctgttaacagaagtcgacaaactg
actaaagatgcccagcacgctttgagaagaacaatggagaagtacatggcaacctgcagg
ctgatcctgtgctgcaattccatctcaaaaattatagcacctatccaaagcagatgcctg
gccatccgagtgcctgctcccagcattgaagatatctgtaatgtattgtccagtgtgtgt
aagaaggaaggcctgactcttcctcaggaactggctcaaaggcttgcagagaagtctggc
aggaatcttcggaaagcactgcttatgtgcgagtcttgcagagtacaacagtatcctttc
actgctgatcaagacattcctgaaatggactgggaagtttatttgagagaaactgcaaat
gctattgtcagccaacagacaccacaaaggcttttagaggttcgtggacggctttatgaa
ctcctaacacactgtattcctcctgagattataatgaagggtcttctgtcagagcttttg
aataactgtgatggacaactgaaaggagaagttgcacaaatggcagccttctacgaacac
cgcttgcaactgggcagcaaagccatttatcatcttgaagcatttgtagcaaagtttatg
gcaatttacaagaagtttatggaggatggactagatgacatgatgttctaa

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