Anas platyrhynchos (mallard): 101798611
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Entry
101798611 CDS
T02816
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101798611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apla03021
]
101798611
Enzymes [BR:
apla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101798611
Transcription machinery [BR:
apla03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
101798611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
PBP_GOBP
Motif
Other DBs
NCBI-GeneID:
101798611
NCBI-ProteinID:
XP_038032903
Ensembl:
ENSAPLG00000004142
LinkDB
All DBs
Position
3:complement(13495389..13511971)
Genome browser
AA seq
1129 aa
AA seq
DB search
MEGGRGPGGGGGGQQRLMRRRPRLRSGVQRDLPAAHIDSFNYAISEGXYQALQDIAPLEF
ALRDSRVSLAIAGAAISPPMVPKGAVCREVKVFPAECRGLRSTYRGKITVDISWSVNGVP
QGTIKHPVGYIPIMVKSKLCSLYNLSPQELIQRHEEEEEMGGYFIINGLEKVIRMLIMPR
RNFPLAMTRHKWKNRGPGFTEYGVVMHCVKEEHAAINMNXHYLENGCVMLNFIFQKELFF
LPLGFALKVNINFTDYQIFKELVKDKENDTFYVNCVTEMLRAVADAGCYTQQNVLEYLGX
SFRVKLNLPEWYSNEQAADLIFNKCVCIHLTDRTEKFYLLCMMTRKLYAFAKGECMEDNP
DSLMNQEVLTPGQLYLMFLKERLENWLQSVRFVLEKRTEKADININADSLIKAFSMTADV
TKAFEYLLATGNLRSKTGLGMLQDSGLCVVGDKLNFVRYLSHFRCIHRGSAFAQMRTTTV
RKLLPESWGFLCPVDTPDGEPCGLMNHMTALCEIVTEMVSVRDLPPLLCALGVVPIDATP
SRPYAECYRVVLDGAVVGWVEWDLAPQLAEALRRFKITQEKRFPARAEVVLIPMTGKPSL
YPGFFIFTTPCRMVRPVKNLLYGRKEWIGTLEQIFMNVATMESEVVPGVTTHLELFPHSI
LSVVANLIPFSDHNQSPRNMYQCQMGKQTMGFPVYNYRDRSDNKLYLLHTPQSPLVRPRM
YDFYSMDSYPVGTNAIVAVISYSGYDMEDAMIVNKSSWERGFAYGSVIKMESIDLSLKAN
RGDDNLVFGARPGDPNVAEKLDADGLPFIGSILQPGDPFYSYMNLNTGETFTVYYKNKEV
GIVDNIKLCSNDRGTGKLKKVCITLRVPRNPTVGDKFASRHGQKGILSQLWPVEDMPFTE
NGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGVCYDATPFTFSEEDSALKYFGETL
VSAGYNFFGTEKMYSGISGLELEADIFVGVVYYQRLRHMVSDKFQVRTTGPRDSVTNQPI
KGRNVEGGIRFGEMERDALLAHGTSFLLHDRLFSCSDGSEAYVCTSCGSMLSPLLQRPPP
SSVASNRRYSCLLCGRVDTIQVIPVPHVFRYFVAELAAMNIKLRLTLEP
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggagggcggccgggggccgggtggtggcggcggcggccagcagcgcctcatgaggcgg
cggccgcggctccgcagcggggtgcagcgcgacctgcccgccgcacacatcgactccttc
aactacgccatcagcgaggggntgtaccaagcgctgcaggacatcgccccgctggagttc
gccctgagggacagccgcgtgtcgctggccatcgccggcgccgccatctcgccgcccatg
gtgccgaagggggcggtgtgccgggaggtgaaggtgttccccgccgagtgccgggggctg
cgcagcacctaccgcggcaagatcacggttgacatcagctggtcagtgaatggcgttcca
caagggactattaaacatcctgtggggtatattccaattatggtgaagtctaaattgtgc
agcctctataatctctctccccaagagctcatccagcgccacgaggaggaagaggaaatg
ggaggctacttcataattaatggcttagaaaaagttattagaatgctgattatgcccaga
cgaaatttccctcttgcaatgacaagacacaaatggaaaaacagaggccctggcttcaca
gagtatggagtagtgatgcactgtgttaaggaggagcacgctgcaataaatatgaacnct
cactacttggaaaacggttgcgtcatgttgaacttcatttttcagaaagagttgttcttc
cttcccttgggatttgctcttaaggtaaatattaatttcacggactaccagatttttaaa
gagctggtcaaagataaggaaaacgacaccttttatgtgaactgtgttactgagatgctg
agagcagtagcggatgcaggctgttacacacagcaaaacgtcctcgaataccttgganag
agcttcagagtaaaactgaacctcccagagtggtacagcaacgaacaggctgcagatctc
attttcaacaaatgtgtctgcatacacttaacagacagaactgagaagttctacctgctc
tgtatgatgacccgaaagctgtatgcttttgccaaaggagagtgcatggaggataatcct
gacagtctgatgaatcaggaagtgcttactccagggcagctttaccttatgttcttaaag
gagaggcttgagaactggctacagtctgttagatttgttttggagaagagaacagaaaag
gcagatatcaacataaatgcagacagcttgatcaaggcattcagcatgacagcagatgtt
accaaggcatttgagtatcttcttgcaactggcaacctgcgatctaaaactggcctgggc
atgttacaggacagcggtctgtgtgtggtgggagacaagctgaattttgttcgctacctt
tcccacttccgctgcatacacagaggctcggcgtttgcccagatgagaaccacaactgtg
cgcaagctgctgcccgaatcctgggggttcctgtgccctgtggacacccctgatggagag
ccctgcggtctgatgaaccacatgacagctctgtgtgaaatagtgacagagatggtgtct
gtgagagaccttccacctttgttatgtgccctaggtgttgttcccattgatgcaactcca
agcaggccttatgctgagtgttacagagtggtgctggacggcgccgtggtgggctgggtg
gagtgggacctggctcctcagcttgcagaagccctccggcgtttcaagataactcaagag
aaaagatttcctgcacgggcagaagtggtccttatcccaatgacaggaaaacccagtctg
tatcctgggttcttcatttttacaaccccttgccggatggtgcggcctgtcaaaaacctg
ctgtatggaaggaaagaatggattggcactctggaacagatcttcatgaacgtggccacc
atggagtcggaggtggttcctggagtgaccactcacctggagctcttccctcacagcatt
ctgagtgtggtggccaacctcatccccttctctgatcacaaccaaagtccacgaaacatg
taccagtgccagatgggaaagcaaaccatggggtttccagtttataactacagggaccgc
tcggataacaagctgtacctcctccatactccccagagccctctggtgaggcccagaatg
tacgacttctacagcatggacagctacccggtcggtaccaacgccattgtggctgtcatc
tcctacagtggctatgacatggaagatgcaatgattgtgaacaaatcttcctgggagaga
gggtttgcttacggaagtgttatcaagatggagagcattgacctttcccttaaagccaac
aggggagatgataatttagtatttggtgccaggcctggtgacccgaatgttgcagagaag
ttagatgctgatggactgccttttattggctccatcctacagccaggggatcccttctac
agctacatgaacctcaacacaggggagaccttcactgtgtactataagaataaggaggtg
ggcattgtagacaacatcaagttatgcagcaacgaccgcggcaccgggaaattgaagaag
gtttgcatcaccttgagagttccccgaaatccaactgtgggcgacaaattcgccagccgt
cacgggcagaaaggcatcctgagccagctgtggccggttgaagacatgccgttcacggag
aacgggatggtcccagacatcctcttcaacccccacgggttcccctcccgtatgaccatc
gggatgctgatcgagagcatggcggggaagtcggcagcgctgcacggcgtctgctacgac
gccactcccttcaccttctcggaggaggactccgctctgaaatacttcggcgagacgctg
gtgagcgcgggttacaacttcttcgggacggagaagatgtacagcgggatcagcggcctg
gagctggaggcagatattttcgtgggagtcgtgtactaccagcgcctgcgccacatggtc
tcggacaagttccaggtgaggacgacgggccctcgggactccgtcaccaaccagcccatc
aaggggaggaacgtggaaggtgggattcgcttcggcgagatggagcgcgacgcgctgctg
gcccacggcacctccttcttgctgcacgaccgcctcttcagctgctctgatggctccgaa
gcttacgtctgcacgagctgcggcagcatgctctctcctctgctgcagcggccaccgccg
tcctccgtggcgagcaacaggaggtattcctgcttgctgtgcggccgggtggacaccatc
caggtcatcccggtgccccacgtcttccgttacttcgtggcagagctggcagccatgaac
atcaagctgaggctgacgctggagccgtga
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