Anas platyrhynchos (mallard): 101798694
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Entry
101798694 CDS
T02816
Symbol
SMARCC1
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101798694 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apla03021
]
101798694 (SMARCC1)
03036 Chromosome and associated proteins [BR:
apla03036
]
101798694 (SMARCC1)
Transcription machinery [BR:
apla03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101798694 (SMARCC1)
Chromosome and associated proteins [BR:
apla03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101798694 (SMARCC1)
PBAF complex
101798694 (SMARCC1)
GBAF(ncBAF) complex
101798694 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
BRCT_2
DUF919
Chromo
SpeFL
Motif
Other DBs
NCBI-GeneID:
101798694
NCBI-ProteinID:
XP_038029818
Ensembl:
ENSAPLG00000014937
LinkDB
All DBs
Position
2:complement(163500693..163579190)
Genome browser
AA seq
1117 aa
AA seq
DB search
MAAAVAAGGGGGGGGGGAGPGAAAVAVAAAAAAAAAAGGGPGLAALSVARRKDGGPTGKF
WESPDTVSQLDSVRVWLGKHYKKYVQADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFT
KLPAKCFMDFKAGGTLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQN
NCLSRPTIYLIPDIELKLANKLKDIVKRHQGTVTEEKSKATHHVYPSPTSMDDDEWLRPV
MKKDKQVLVHWGFFPDSYDTWVHANEIDAEIEDPPIPEKPWKVHAKWILDTDIFNEWMNE
EDYEVDENRKSVSFRQRISMKNEEPVRSPERRDRKAAASTRKRKHSPSPPPTPVESRKKT
GKKGQAALYGKRRGQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGG
TVADLDEQDEETVATGGKEDEDPNKGDQSRSIDPGEDNVTEQTNHIIIPSYASWFDYNCI
HVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVM
RVHAFLEQWGLINYQVDPESRPMAMGPPPTPHFNVLADTPSGLMPLHIRTPQVPAAQQML
SFPEKNKEKPTDLQNFGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWN
KVSEHVGSRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLA
SVVDPRVASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIA
GTGPDEPEKIDGAEEEKMETETDGQQSEKVENKVESEIEEGDKAQEGENERNPEKEQDSE
VTADTKTEEKETEENKENVDASKDKENEAGKKKVEHEISEGNVATAAAAALASAATKAKH
LAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFH
MEQLKYAELRARQQMEQQHSQNPQQPHQHSGGPGMNPLGAPAHPGLLPHQQPPPYPMMHH
QMPPPHPPQPGQMPGPGSMMPGQPMPGRMMPSVAANIHPAGGGPPPPGMSPMSGNLIGPR
VPLAAPNGMYPPPAQPPPPAEGVTPPPAGAPPASAAP
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggtggcggcgggaggaggaggtggaggaggaggaggaggagcggggccc
ggagcggccgcggtggctgtggcggcggcagcggcggccgccgcggctgctgggggcggc
ccgggtttggcggcgctgtcggtggctcggcggaaggacggcggcccgacgggcaagttc
tgggagagccccgacaccgtgtcccagctcgactcggtgcgagtctggctcgggaagcac
tacaagaagtatgttcaagcagatgctcctaccaataaaacgctggctgggctggtggtg
cagctgctgcaattccaggaagatgcctttggaaaacatgtcaccaatcctgccttcaca
aagcttcctgcaaagtgcttcatggatttcaaagctggaggtacattatgtcacattctt
ggtgctgcttacaaatataagaatgaacagggctggcggaggtttgacctgcagaatcca
tcccgaatggatcgaaacgtggagatgttcatgaacattgagaaaacactagtgcagaac
aactgtctgagtagaccaaccatctacctcattccagatatagaactgaagctggctaat
aaattaaaggatatcgtcaaacgccaccagggaacagtaactgaagagaaatcaaaggct
acccaccacgtttatccaagtcctacctcaatggatgatgatgaatggctgagacctgtg
atgaaaaaagacaagcaggtgctggtacactggggattctttccagacagctatgacact
tgggttcatgccaatgaaatagatgctgaaattgaggatcctccaattcctgaaaagcca
tggaaggttcatgccaagtggattttggacacagatatattcaacgaatggatgaatgaa
gaggattatgaggtagatgagaacaggaaatcagtgagttttcggcagagaatctccatg
aaaaatgaagagcctgtacgtagtccagagaggagagacaggaaagcagcagcaagtaca
agaaagagaaagcattctccttctccaccccccactcctgtggagtcaagaaaaaagaca
gggaagaaaggacaagcagccttatatgggaaaaggagagggcagaaagaagaagatgag
caagaagatcttacaaaggacatggaggatcccacaccggtacctaatatagaagaagtg
gtacttcccaaaaatgtgaacccaaagaaagacagtgaaaacacacctgtgaaaggagga
acagtagcggacctcgatgaacaggatgaggagacagtggcaactggaggaaaggaagat
gaagaccctaacaaaggtgatcaaagtcggtcaattgatccaggtgaagataacgtcaca
gaacaaaccaaccacatcattattccaagctatgcatcttggtttgactacaactgtatt
catgtgattgagcgtcgcgctcttcctgaattcttcaacggaaaaaacaagtccaagact
ccagaaatatacctcgcttaccgcaacttcatgatcgacacctatcgcttaaaccctcag
gagtatttgaccagcactgcctgcagaaggaatctgactggagatgtgtgtgctgtcatg
agagtacatgcttttctggagcagtggggtctcatcaactaccaggtggatccagaaagt
cgtcccatggccatgggccctcctcctactcctcatttcaacgtgctcgcagatacaccc
tctggcctgatgcctctccacatccgcactccccaggttccagctgctcagcagatgctg
agttttcctgagaaaaacaaagagaaacctactgatctgcagaactttggacttcgcaca
gatatttactcaaaaaagactttagcaaagagtaaaggtgcaagtgctggaagagaatgg
acagaacaagagacgttgctgctattagaagctctggagatgtacaaagatgactggaac
aaagtctcggagcacgttgggagccgtacccaggatgagtgcattctccattttctgagg
cttcctatcgaagatccctatttggagaactccgatgcatcccttggcccgctggcttac
cagcccgttcctttcagccaatctggcaatcccgtgatgagtactgttgcttttctggca
tcggtggtggatccccgggtggcatcagctgcagcaaaggctgcattagaggagttttct
cgagtcagagaggaagtaccactggagctagttgaagctcacgtaaagaaagtacaagaa
gcagcacgagcctctgggaaggtggatccaacgtacgggctggagagcagttgcattgct
ggaacaggtccagatgagccggagaaaatcgatggagctgaagaagaaaaaatggaaaca
gaaacagatgggcagcagtctgagaaggttgaaaacaaagtggagagtgaaattgaggaa
ggtgataaagcacaagagggagaaaacgagagaaacccagaaaaagaacaagatagcgaa
gtgactgcagacaccaagacagaagaaaaggagacagaagagaacaaggagaacgttgat
gcaagcaaagacaaagaaaatgaggctgggaagaagaaagtggaacatgaaatctcggaa
ggaaacgtagctacagctgcagctgctgctcttgcctcagctgccaccaaagcaaagcat
ctagcagcagtggaagaaagaaagatcaagtccctggttgcccttctggtggaaacacag
atgaagaagctggagataaaacttcgccattttgaggagctggaaaccattatggacaga
gagaaagaggcattagagcagcagagacagcagttgctgacagaacgccagaattttcac
atggaacagctgaaatacgctgaattaagggctcgtcagcaaatggagcagcagcacagt
caaaacccacagcaacctcaccagcactccggtgggcctggaatgaacccgctcggggca
ccagcacatccaggcctcctgccccatcagcagcccccgccgtacccaatgatgcaccac
cagatgccaccaccccacccaccacagccaggtcagatgccaggacctggctcgatgatg
cctgggcagcccatgccaggccggatgatgcccagcgtggcggccaacatccacccggcc
ggcggcggtccccccccacccggcatgtcaccgatgtcagggaacctcatcggaccccgc
gttcctctagcagctcccaacggcatgtatcccccccctgcgcagccgcctccaccagcg
gaaggggtgaccccacctccggcaggagccccgccggcctcagcagctccctaa
DBGET
integrated database retrieval system
