Anas platyrhynchos (mallard): 101798703
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Entry
101798703 CDS
T02816
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03022
Basal transcription factors
apla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101798703 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
101798703 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apla03021
]
101798703 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
apla03400
]
101798703 (GTF2H1)
Transcription machinery [BR:
apla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
101798703 (GTF2H1)
DNA repair and recombination proteins [BR:
apla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
101798703 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
101798703
NCBI-ProteinID:
XP_005028468
Ensembl:
ENSAPLG00000005620
UniProt:
R0L479
LinkDB
All DBs
Position
5:complement(30332365..30354037)
Genome browser
AA seq
548 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTVSHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLSLNAGDNSAAPSKQDVGISAAFLADVRPQTDGC
NGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEREFWTRFFQSHYFHRDRLNTGSKD
LFAECAKLDEKGLKTMVSQGVKNPLIDLTALEDKTLDEGYGVAPVASTSNASKSARESSN
AAIIKRFNHHSAMVLAAGLKKQEAQNDHYSETSSTDGNSRDSDFFQPPTKKVKLQESIEY
EDLATNNSIKTIALNLKKSDRYYHGPTPIQSQQYATSQDIISSFNSIRQEMEAYVPKLTQ
VLSSGDATSTIAVLSPGGALMQGGTQQAINQMVPNDVQSELKHLYVAVGELLRHFWSCFP
VNTPFLEEKVVKMRSNLERFQVTKLCPFQEKIRRQYLSTNLISHIEEMLQTAYNKFHTWQ
SRRMLKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcgacatcatctgaagaagtgttactgatagtaaagaaggtacgtcagaagaagcag
gatggggctctctaccttatggctgaaaggatagcatgggcacctgaaggcaaagaccgc
ttcaccgtcagccatatgtatgcagacataaaatgccagaaaatcagtccagaaggtaaa
gctaagattcagcttcagctagtattgcatgcaggggacacaaccaactttcacttctcc
aatgaaagcacagcagtgaaggagcgagatgctgttaaggatcttcttcaacaactgttg
cccaaattcaaaaggaaagctaataaagaacttgaggagaaaaacagaatgctgcaagaa
gatcctgttttgtttcagctctataaagaccttgttgtgagccaagtaatcagtgctgaa
gaattctgggccaaccgtttaagcctgaatgcaggggataattctgcagcacctagtaag
caggatgtgggcatctctgcagcatttctggctgatgtacggcctcaaacagatggttgc
aatggtctgaggtacaatttgacttcagatatcatcgaatccatatttcgaacatatcct
gcagtaaaaatgaaatatgcagaaaatgttccacataacatgacagagagggaattctgg
acacgattttttcagtctcattatttccatcgggacagactcaatacaggctcaaaagac
ctctttgcagaatgtgccaaactggatgaaaaagggttaaaaacaatggtatctcaagga
gtaaaaaaccctctgatagatttaacagctttggaagataaaacattagatgaaggctat
ggtgttgctcctgtggcctctacatcaaatgcctcaaaatctgctagagaaagtagcaat
gctgccattataaaacgctttaatcatcatagtgccatggtccttgcagctggcctcaaa
aaacaagaagcacaaaatgaccattacagtgagaccagcagtacggatggaaactccagg
gattcagatttctttcaaccaccaacgaaaaaggtgaaactacaggagtccattgaatat
gaagatttagcaacgaataatagcattaaaactattgcactaaacttaaagaaatctgac
aggtattatcatggtccaactccaattcaatcacagcaatatgcaaccagtcaggatata
attagttcttttaatagtattaggcaagaaatggaagcatatgtacccaaactaactcag
gttctttcaagtggtgatgctactagcactattgcagtcctgtcacctggaggagcactt
atgcagggtggaacacagcaagccataaaccagatggtgccaaatgatgttcagtctgaa
ctaaaacacttgtatgtggcagtaggggaactgctacgacacttctggtcctgctttcca
gttaatacgccattcctagaagaaaaggttgtgaaaatgaggagcaacttggaaagattt
caggtgacgaagctctgcccattccaagaaaagattcggagacagtatttaagcacaaat
ttgataagtcatatagaagagatgctgcagacggcctacaataaattccatacatggcag
tcccgccgtatgctgaagaagacgtga
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