Anas platyrhynchos (mallard): 101798881
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Entry
101798881 CDS
T02816
Symbol
DDX6
Name
(RefSeq) probable ATP-dependent RNA helicase DDX6 isoform X1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101798881 (DDX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apla03019
]
101798881 (DDX6)
03036 Chromosome and associated proteins [BR:
apla03036
]
101798881 (DDX6)
Enzymes [BR:
apla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101798881 (DDX6)
Messenger RNA biogenesis [BR:
apla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
101798881 (DDX6)
mRNA degradation factors
5'-3' decay
Decapping complex
101798881 (DDX6)
Chromosome and associated proteins [BR:
apla03036
]
Eukaryotic type
Gene silencing
piRNA pathway
101798881 (DDX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
101798881
NCBI-ProteinID:
XP_027300148
Ensembl:
ENSAPLG00000007274
EnsemblRapid:
ENSAPLG00030019489
LinkDB
All DBs
Position
25:complement(5549341..5565982)
Genome browser
AA seq
488 aa
AA seq
DB search
MSTARTENPVIMGLSSQNGQLRGPVKPSGGPGGGGTQTQQQMNQLKNANTINNGTQQQAQ
SMTTTIKFFFGRPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMG
WEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRE
LALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVA
KVEHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKP
YEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKIS
QLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLA
ETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHS
EPVEDEKQ
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggccagaacagagaaccctgttataatgggtctatccagtcagaatgggcaa
ttgagaggccctgtaaaacccagcgggggcccaggaggtggaggcacacagactcagcaa
cagatgaaccagctgaaaaatgccaacacaatcaataatggcactcaacaacaagcacag
agtatgaccaccactattaaattttttttcggtagacctggtgatgactggaagaagact
ttaaaactccctccaaaggatttgagaatcaaaacttcggacgtgacctccacaaaagga
aatgagtttgaagattactgtttgaaacgggagttgctgatgggaatttttgaaatgggc
tgggaaaaaccatctcctattcaggaggagagcatccccattgctttatctggtagggat
atcttggctagagcgaaaaatggaacaggcaagagtggagcctacctcattcccttactt
gaacggctagacttaaagaaggacaacatacaagcaatggtgattgttcccacccgtgaa
ctagccctgcaggtcagtcaaatctgtatccaagtcagcaaacacatgggaggtgccaaa
gtgatggcaacaacaggaggaaccaatttgcgagatgacataatgaggcttgatgataca
gtgcatgtggtgatagctacccctggcagaattctcgatctcatcaagaaaggagtagca
aaagttgagcatgtccagatgatagtattggatgaggcagataagttgctgtctcaagat
tttgtacaaataatggaagacattattcttacgctacctaaaaacagacagattttgctc
tactcagccactttccctctgagtgtacagaaattcatgaattcccatttgcagaaaccc
tatgagattaatctgatggaggagttaaccttgaagggagttactcagtactatgcctat
gtaactgagcgtcagaaggttcattgcctcaatacactgttttccaggctccagattaac
cagtcgatcattttctgcaactcctctcaacgggttgaattgttagccaaaaagatctcc
cagttgggctattcctgcttctatatccatgctaaaatgaggcaggagcaccgcaatcgt
gtgttccacgatttccgaaatggcttatgccgcaatcttgtttgcactgatctgtttacc
cgaggtattgatatccaagctgtgaacgtggtgataaactttgatttcccaaagctggcg
gagacttatctccatcgtattggcagatcaggtcgctttggtcatcttggcctggccatc
aacttgatcacctatgatgatcgattcaacctgaaaagtattgaggagcagttgggaact
gaaattaaacccataccaagcaacattgacaagagcctgtatgtggcagaataccacagt
gaacctgtagaagatgagaagcagtaa
DBGET
integrated database retrieval system
