Anas platyrhynchos (mallard): 101799316
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Entry
101799316 CDS
T02816
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03030
DNA replication
apla03420
Nucleotide excision repair
apla03430
Mismatch repair
apla03440
Homologous recombination
apla03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101799316 (RPA1)
03420 Nucleotide excision repair
101799316 (RPA1)
03430 Mismatch repair
101799316 (RPA1)
03440 Homologous recombination
101799316 (RPA1)
03460 Fanconi anemia pathway
101799316 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
apla03000
]
101799316 (RPA1)
03032 DNA replication proteins [BR:
apla03032
]
101799316 (RPA1)
03400 DNA repair and recombination proteins [BR:
apla03400
]
101799316 (RPA1)
Transcription factors [BR:
apla03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
101799316 (RPA1)
DNA replication proteins [BR:
apla03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
101799316 (RPA1)
DNA repair and recombination proteins [BR:
apla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
101799316 (RPA1)
MMR (mismatch excision repair)
101799316 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
101799316 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
DUF4939
CATSPERD-E_C
Motif
Other DBs
NCBI-GeneID:
101799316
NCBI-ProteinID:
XP_027327916
Ensembl:
ENSAPLG00000012442
LinkDB
All DBs
Position
20:complement(5575207..5598040)
Genome browser
AA seq
640 aa
AA seq
DB search
MTRRKWERGSERREDSAVAERGGSGGTMSVRLSEGAIAAIMQGENVTKPVLQVINTRAIA
TGNGPPRYRVLMSDGVNTLSSFMLATQLNSLVEEERLSAQCICQVNRFIVNSLKDGRRVV
ILMDLDVLKTADMVGGNIGNPVPYNEGQGQQRSSAPAANAAANKPQQQNGNVSVAGPPAP
KYHAPSNQFSKASAPSAMKTPGGSQAKVVPIASLNPYQSKWTICARVTQKGQIRTWSNSR
GEGKLFSIELVDESGEIRATAFNDQADKFFPLIELNKVYYFTKGNLKTANKQYTAVKNDY
EITFTNETSVVLCDDAQHLPSVRFEFVSISELENTPKDSIVDVIGICKSYEDVTKITVKA
SNREVSKRNVHLMDTSGKLVTATLWGNEADTFDGSRQPVVAIKGARVSDFGGRSLSVLSS
STVVVNPDTPEAFKLRGWFDSEGQLLECSSISDVRGSAPGVNTNWKTLYEVKAENLGQGD
KADYFSCVGTVVHLRKENCMYQACPSQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMMLL
VTIADCLEYQWVTCFQDTAEFILGQSAAFLGELKEKNEQAFEEVFQNANFNTYEFRIRVK
LETYNDESRIKATATDVKPVNYREYSKRLIANIRRNAQLG
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgccggaagtgggagcgcggctcggagcggcgggaggattcggcggtggcggag
cgcggcgggagcggcggcaccatgagcgtgcgcctcagcgagggcgccatcgcggccatc
atgcagggggagaacgtcacgaagcctgtgctgcaagtcatcaatacacgggctattgct
acaggaaatgggcctcctcgttaccgagtgctgatgagcgatggggttaacacgctgtcc
tccttcatgttggcaacgcagctgaactctctcgtggaagaggaacgcttatcagcccag
tgtatttgccaggttaacagattcattgtcaacagcttgaaagatggaaggagagtggtt
atcttgatggacttagatgttctaaaaactgctgatatggttggtggtaatattggcaat
ccagtgccgtacaatgaagggcaggggcagcagcgttcttcagctccagcagcaaatgca
gcagccaacaaaccacagcaacaaaatggcaatgtgtcagtagcaggtcctcctgctcca
aagtaccatgctccctcaaaccagttcagtaaagcgagtgctcccagcgcaatgaagaca
ccagggggatctcaggctaaagtagtgccgattgccagcttgaatccataccaatctaag
tggaccatttgcgctcgtgttacccaaaaaggccagatccgcacatggagcaactcccgc
ggggaaggaaagctcttttctatagagcttgttgatgaaagtggtgagattagagctact
gcgttcaatgatcaagcagacaagttctttcctctcattgaactgaacaaggtatattat
tttaccaaaggcaatttgaagactgctaacaagcaatatacagctgttaagaatgactac
gagattacattcactaatgagacttcagttgtgctctgtgatgatgcccagcatcttcca
tctgttcggtttgagtttgtatccatctcggagttggagaacacacccaaagactcaatt
gtcgatgtaattggaatctgtaagagctatgaagatgtcactaaaattacagtgaaagct
agcaatagggaagtatcaaagaggaatgtgcatctgatggatacatcagggaaactggtg
acagctacgctgtggggaaatgaggctgacacatttgatggttctagacaacctgtggta
gccatcaaaggagcccgagtctctgattttggtggtagaagcctctctgtcctgtcgtcg
agtacagttgttgtcaaccctgataccccagaggcttttaagcttcgaggatggtttgac
tccgaggggcagcttctggaatgctcctcgatctctgatgtaagaggctcagcacctggg
gtgaacaccaactggaaaactttgtatgaagtcaaagctgagaacttgggacaaggagat
aaggcggattattttagctgtgtgggcacagtagtacatctgcgcaaagagaactgcatg
taccaggcctgtccctctcaggattgcaataagaaagtgatagaccaacagaatggactg
tatcgttgtgaaaagtgtgatcgtgaattccccaatttcaagtaccgcatgatgcttctg
gtgaccattgcagactgtctagagtatcagtgggtgacttgcttccaagacacagcagaa
ttcattcttgggcaaagtgctgctttcctgggagaactgaaggaaaagaatgagcaggca
tttgaagaagtcttccaaaatgccaacttcaacacgtatgagttcaggatcagagtaaaa
ctggagacttacaatgacgaatcccgtattaaggctacagcaacggatgtcaaacccgta
aactacagagaatacagcaagaggttgatcgcaaacatcaggagaaatgctcagctaggg
tga
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integrated database retrieval system
