Anas platyrhynchos (mallard): 101800129
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Entry
101800129 CDS
T02816
Symbol
RAD50
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03440
Homologous recombination
apla03450
Non-homologous end-joining
apla04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101800129 (RAD50)
03450 Non-homologous end-joining
101800129 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
101800129 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apla03032
]
101800129 (RAD50)
03400 DNA repair and recombination proteins [BR:
apla03400
]
101800129 (RAD50)
DNA replication proteins [BR:
apla03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
101800129 (RAD50)
DNA repair and recombination proteins [BR:
apla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
101800129 (RAD50)
BRCA1-C complex
101800129 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
101800129 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SbcC_Walker_B
AAA_15
SMC_N
AAA_21
NPV_P10
DUF2703
Motif
Other DBs
NCBI-GeneID:
101800129
NCBI-ProteinID:
XP_038042461
Ensembl:
ENSAPLG00000011856
LinkDB
All DBs
Position
14:complement(1662463..1683137)
Genome browser
AA seq
1316 aa
AA seq
DB search
MARIEKMSILGVRSFGIEDKDKQIITFHNPMTILVGPNGAGKNGKTYTIIECLKYVSTGD
FPPGTKGNSFVHDPKVAHETDVRAQIRLQFRDVNGELVAVQRSMVCTQKNKKTEFKTLEG
VITRTKHGEKVSLSSKCAEIDREMISALGVSKSVLNNVVFCHQEESNWPLSEGKALKQRF
DEIFSATRYIKALETLRQVRLKQSLKVKECQTELKYLKQNKEKAQEIQDHLNNREAQLSA
SKENVKSIESQLDPLKCSLAAVEKNLMKVMLLDNDVKALESRRRQMDKDNQDLQQKMEKV
FQGTDEQLRDRYQNHQRTVKEKEKRLSDCKRELDRAIKECQRFNSEKSELLVERGRLQLQ
ADRHQEHIKTRDSLIQSLAAQLELDGFELSPLNERQITNFHRLLKERQARDTETANHLMR
EFAQKEAMKQKQIDEIRDKKTGLERTIDLKSDIQYKRQAELKNVKHELQQLEGSSGRIVE
LDEEIVKTEHELEKAERSSNVETLELEVQTLQNEKINLDKSLRKLDQEMEQLNLHTTTIT
QMEMLKKDKADKEEQIRKVKSRHSEELTLLLGYFPNKKQLEDWLHGKNREINETRDRHAK
LNKQLASAEQQKNFISAELRRKEEQLSSYEAKLFDVCGSQDFDSNLNKLQDEIEKSSKQR
AVLAGATAVYSQFITQLTEENQSCCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTE
SELKRREKKRDEMMGLKPIRQTVVELQERDIPDLRNKLQTVNRDFARLKGEIEEQETLLQ
TVLSEKEGANACLQDITLMERYQADIRDVERKIAQQEAKLLGVDLSRTVLQVSQEKQEKK
HLWDTVTSKIELNQKIKQDQQNQIQQLKSTVNELRAEKLQISSSMQRRQQLEEQIVELTT
EFQSLHREIKEAKEQVFPLHETLEKLQQDKEDLINKRTATNKETQEKINTIKEKVKDINK
YMKEIESYIQEGKEDYKKQKESELDEVNSQLVACEKQKEKISKEMEIIRQDIDTQKIQER
WLEDNLTLRKRNEELKEVEDNINRLMKEMGEMKVPQMKNEQKNLEEKIEALKRNHHVALG
RQRGFEEEIVRFKKELRESQFKDAEEKYREMMIVMRTTELLNKDLDTYYKALDKAIMTFH
SMKMEEINKIIRDLWRNTYRGQDIEYIEIRSDADENVSAADKRRSYNYRVVMIKGDTALD
MRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKNR
TKQRNFQLLVITHDEDFVELLGRSEYVETFYRIRKNDDQCSEIMKCSVSSLGSYVH
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggattgagaaaatgagcatcctcggcgtgaggagttttggcatagaggataaa
gacaaacagattatcactttccataatccaatgactattctggtgggaccaaatggtgca
gggaaaaacggtaagacttacactatcattgagtgccttaaatatgtgtccactggagat
tttcctcctggaaccaaaggaaattcatttgttcatgatccaaaggttgcccatgaaact
gatgttagagctcagattcgattacagtttcgagatgttaatggagagcttgtagctgtc
caacgatccatggtgtgtacccagaaaaacaagaaaacagagtttaaaacacttgaaggg
gtcattactagaacaaagcatggtgagaaggtcagtctcagttccaagtgtgcagaaatt
gatcgagagatgatcagtgcccttggtgtttccaaatctgtgctcaacaatgttgttttc
tgccaccaagaagagtccaactggccattaagcgaagggaaggccctgaaacaaagattt
gatgagatcttctcagcaacaaggtatattaaagcactggaaactctccgtcaggtacga
ctgaaacaaagcctaaaagtaaaagagtgtcagacagagctgaagtacctaaagcagaat
aaagaaaaagcacaggaaatccaggaccatcttaacaatagggaagctcagctgtctgct
tctaaggagaatgtaaaatctatcgagagtcagctggatcctttaaagtgttctctggca
gcagttgaaaagaatctcatgaaagtaatgttgctagacaacgacgtaaaagctctggag
agcaggaggaggcagatggataaggataatcaagacctgcaacagaagatggaaaaggtt
tttcaaggaacggatgaacagctaagggatagataccagaaccaccagagaacagtgaag
gagaaggagaagagattatcagactgtaagcgtgaattagatagggccattaaagaatgc
cagaggtttaacagtgaaaagtcagaactactcgttgaacgaggtcgtctacaactgcaa
gcagatcgtcaccaagaacacatcaaaacgagggattcattaattcagtctttggcagca
cagctagaattagatggttttgagctatcacctcttaatgaaagacagattaccaatttt
cacaggttattgaaggagagacaagcgagagatacagaaactgcaaatcacttaatgaga
gaatttgcacaaaaagaagcgatgaaacaaaaacagatagatgaaataagagataagaaa
actggattagaaagaaccattgatctgaaatcagatatccaatataagagacaagcagaa
ctgaagaatgtaaaacatgaattgcagcagttggaggggtcatcaggcagaattgtggaa
ttggatgaagagattgtcaagacagaacatgaactggagaaggctgagaggagcagcaat
gtagaaacacttgaactggaagtgcaaactctgcaaaatgagaaaataaacctggacaaa
agtcttcggaagctggatcaagagatggaacagttgaacctacataccacaacaattacc
caaatggagatgctgaagaaagacaaagcagacaaagaggaacagattagaaaagtaaaa
tcaagacattctgaagaactgacgttactgctggggtactttccaaataaaaaacaactt
gaagactggctccatggcaaaaatagagagattaatgaaacaagggacagacatgccaag
cttaacaaacaactggcatcagcagaacaacagaagaattttatcagtgctgaactaaga
agaaaagaagaacagttgtctagctatgaagcaaaactttttgatgtttgtggaagccaa
gattttgacagtaacctgaacaaacttcaagatgaaattgaaaaaagttcaaaacagcga
gctgtgcttgctggagccacagcagtttattcacagttcattacacaactaacagaagag
aaccagtcgtgttgtccagtttgtcaaagagtttttcaaacagaggctgaactgcaagat
gtaattagtgatcttcagtctaagttgcgtcttgcaccagacaaattgaagtcaacagag
tctgagcttaaaagaagagagaaaaaacgtgatgaaatgatgggtcttaaaccaattagg
caaacagtagtggaactccaagaaagggacataccagacttgaggaacaagctgcaaact
gtgaacagggattttgcacgcctgaagggtgagatagaagagcaggaaacactcctgcag
acagttctgtctgagaaggaaggtgctaatgcatgtttacaggacataacactaatggaa
aggtaccaggctgatattagggatgttgaaagaaaaattgctcagcaggaggctaagctg
ctaggggtcgatttaagtagaactgttctacaagtaagccaagaaaaacaagagaagaaa
cacttatgggatacagttactagtaaaattgagttaaatcaaaaaatcaagcaagaccag
cagaatcagattcagcagcttaagagtacagttaatgaacttagagcagagaaacttcag
atttccagcagcatgcagcgtcgtcaacaactggaggagcaaatagtggaattaaccact
gagtttcagtccttacatagagagattaaggaagcaaaagaacaggtatttcccctacat
gaaactttagaaaaactgcagcaagacaaggaggatctaattaataaaaggactgcaact
aataaagaaacacaagagaagataaataccataaaagagaaagttaaagatataaacaag
tacatgaaagaaatcgaaagctatattcaagaaggaaaggaagactacaagaagcaaaag
gagtctgaacttgatgaagtaaactctcaattagttgcctgcgagaaacagaaggaaaag
ataagtaaagagatggaaattattcgacaagatattgacactcaaaagatacaggaaagg
tggctagaggataatctgactttgaggaagcggaatgaagaattaaaagaagttgaagac
aatataaatagacttatgaaggagatgggagaaatgaaagtcccgcagatgaaaaatgaa
caaaaaaatttagaggagaaaatagaagctctgaaaagaaaccatcatgttgcacttggc
cgacagcgtggatttgaggaagagattgttcggtttaaaaaggaacttcgagagtcacaa
ttcaaagatgcagaggaaaaatacagggagatgatgattgttatgagaacaacggagcta
ttgaacaaggatttggacacttattacaaggctcttgataaagcaataatgacatttcat
agcatgaagatggaagaaattaacaaaataattcgtgacctttggagaaatacctacaga
ggacaagatattgaatatatagaaattcgctctgatgcagatgagaatgtttcagcagct
gataagagaagaagctacaattatagagtagtaatgataaagggagatacagcactggat
atgagaggaagatgtagtgctgggcaaaaggtgcttgcttctcttattattcgtcttgct
ctagcagaaacgttctgtctcaactgtggcatattggcactagatgagcctaccaccaat
cttgatcgagaaaacattgagtctcttgcacatgccctcgtggagataataaaaaaccgc
acaaaacagcgtaactttcagcttctggtgataactcatgatgaagattttgttgaactg
ctgggccgttctgaatatgtggagaccttctacaggatacggaagaacgatgaccagtgc
tctgagatcatgaaatgcagtgtcagctcccttggctcatatgttcattag
DBGET
integrated database retrieval system
