Anas platyrhynchos (mallard): 101800168
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Entry
101800168 CDS
T02816
Symbol
SLIT2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
apla00536
]
101800168 (SLIT2)
Glycosaminoglycan binding proteins [BR:
apla00536
]
Heparan sulfate / Heparin
Axon guidance molecules
101800168 (SLIT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
Laminin_G_2
LRRNT
LRR_9
LRRCT
hEGF
LRR_1
EGF_TEN
LRR_14
EGF_DL_JAG
EGF_Teneurin
EGF_3
FXa_inhibition
Motif
Other DBs
NCBI-GeneID:
101800168
NCBI-ProteinID:
XP_038034253
LinkDB
All DBs
Position
4:complement(59018627..59276145)
Genome browser
AA seq
1532 aa
AA seq
DB search
MMCGWGKLTLALGLLLAMAGDVAPQPCPAQCSCSGSTVDCHGLALRGVPRNIPRNTERLD
LNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLLSEL
LFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLT
LNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPAH
LRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPTACTCSNNIVDCRGKGLTEIPTN
LPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISETAPDAFQGLRSLNSLVLYG
NKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFS
PLRAIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFR
CSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDHIPQYTAE
LRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLESV
RDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLS
TLNLLANPFNCNCHLAWLGDWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGND
DNSCSPLSRCPAECTCLDTVVRCSNKGLKALPKGIPKDVTELYLDGNQFTLVPKELSNYK
HLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDI
SVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKLL
LTTPSKKFTCQGPVDVNILAKCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDCDIP
IHACISNPCNHGGTCHLKEGEKDGFWCTCADGFEGENCEINVDDCEDNDCENNSTCVDGI
NNYTCLCPPEYTGELCEEKLDFCAQNLNPCQHDSKCILTPKGYKCDCTPGYIGEHCDIDF
DDCQDNKCKNGAQCTDAVNGYTCICPEGYSGLFCEFSPPMVLPRTSPCDNYECQNGAQCI
IKESEPICQCLSGYQGEKCEKLISINFVNKESYLQIPSAKIRPQTNITLQIATDEDSGIL
LYKGDKDHIAVELYRGRVRVSYDTGSYPASAIYSVETINDGNFHIVELLAMDQILSLSVD
GGSPKIITNLSKQSTLNFDSPLYVGGMPVKNNIAALRQSPGQNGTSFHGCIRNLYINSEL
QDFRNVPLQVGILPGCEPCHKKVCVHGTCHATSQSGFSCECEGGWTGPLCDQQTNDPCLG
NKCVHGTCLPINAFSYSCKCLQGHGGVLCDEDEMLFNPCQSIRCKHGKCRLSGLGKPYCE
CSSGYTGDSCDKEISCRGERIRDYYQKQQGYAACQTTKKVSRLECKGGCSTGQCCGPLRS
KRRKYSFECTDGSSFVDEVEKVVKCGCTNCPS
NT seq
4599 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcggctgggggaagctcaccctggccctggggctgctgctggccatggcgggc
gatgtggcgccgcagccgtgcccggcgcagtgctcctgctcggggagtaccgtggactgt
cacgggctggcgctgcgcggcgtcccgaggaacatcccccgcaacaccgagaggctggat
cttaatggaaataacatcaccagaatcaccaagaccgactttgctggtctaaggcacctt
cgagttcttcagctcatggagaacaagattagcactatcgagagaggagcattccaggat
ttaaaagaactggagaggctgcgcctaaacagaaataacctccagttgctttctgaactg
ctctttctggggacaccgaagttatacaggcttgatcttagtgaaaatcagattcaagct
ataccaaggaaggcattccgtggggcagtagacataaaaaatctgcaactggattacaac
cagatcagctgtattgaagatggggcatttagggctctacgcgacctggaagtgctcact
ctcaacaataacaacatcacccgactgtctgttgcaagtttcaatcatatgcccaaactc
agaacttttcgccttcactccaacaacctttactgcgactgccacctggcctggctgtcc
gactggctgcggcagcggcctcgcgtcggcctctacacccagtgcatgggcccggcccac
ttgcgggggcacaacgtggcggaggtccagaaacgggagttcgtctgtagtgatgaggaa
gaaggtcaccagtcttttatggctccatcctgcagtgtcttgcattgtcccactgcatgc
acctgtagtaacaacattgtggattgtcgtggaaaaggccttactgaaatcccaacaaat
cttccagaaaccattactgaaatacggttagaacaaaattcaatcaaggtcatacctcct
ggagctttctcaccatacaaaaagcttcgaagaattgacctgagcaataaccagatctct
gaaacagctccagatgctttccagggcttacgttcactcaattcacttgtcctttatggc
aataaaattacagaacttccaaaaggcttatttgaaggactcttttctctgcaattgcta
ttattaaatgccaacaagataaattgcctgcgagttgatgcttttcaagatctgcacaac
ctgaatctcctttctttgtatgacaacaagcttcagaccattgcaaaaggcactttctca
cctctacgtgcaattcagaccttgcatttggcgcagaacccatttatctgtgactgccat
ctgaagtggctggcggattatcttcatacaaaccccattgagaccagtggtgcccgctgc
accagcccccgccgtctggcaaacaaaaggattggacagatcaaaagcaagaaattccgc
tgctcagctaaagaacagtatttcattccaggcactgaagattacagatccaaattaagt
ggagactgctttgcagatttggcttgccctgagaaatgtcgctgtgaagggaccacagtg
gactgctccaatcagaaactcaacaaaatacctgatcacatcccccagtacacagcagag
ttgcgactcaataacaatgaattttcagtcctggaagctactggaatatttaagaagctt
cctcaactgcgtaaaataaacctgagcaataacaagattacagatatcgaagaaggagca
tttgatggagcctctggtgtgaatgaactattgctcactagcaatcgcttggaaagtgtt
cgagacaaaatgttcaaaggactggaaagtcttaaaacactgatgctgaggagcaaccgt
gtgagctgtgtggggaatgacagtttcacaggcctgagctccgtccgcctgctctcactg
tatgacaaccagatcaccactgtggcaccgggctcctttgacaccttgcattcactgtct
acgttaaacctcttggccaatcccttcaactgcaactgccatctcgcgtggcttggagat
tggctaaggaagaaacgcattgtgacaggaaaccctcgctgtcaaaagccttacttcctc
aaagaaattcctatccaagatgtggcaattcaggactttacatgtgatgatggaaatgat
gacaatagctgttctccactgtcccgctgtcctgcagaatgtacttgtctagacacagta
gttcgctgcagcaacaaaggcctaaaagctttgcctaaaggcatcccaaaagatgtaact
gaactttatttggatggaaatcagtttacccttgttccaaaagagctttccaactacaag
catttaacacttatagatttaagtaacaacagaatcagcactctttctaatcagagcttc
agcaacatgactcaactgctcaccttaattcttagttacaatcgcctgagatgtatccct
gcacggacttttgatgggttgaaatcacttaggttgttgtctttgcatggcaatgacatt
tctgttgttcctgaaggagcttttaatgatctctcagcattatcacacctggctattgga
gcaaatcctctttattgtgattgtaacatgcagtggctgtctgactgggtaaaatcagaa
tataaagaacctggtattgcgcgttgtgctggccctggagaaatggcagataaacttcta
ctcacaactccatctaaaaaatttacttgccaagggcccgtggatgttaatattcttgca
aagtgtaacccatgtttatcgaatccatgtaaaaatgatggaacctgcaacaatgatcca
gttgacttctatagatgtacttgcccatatggtttcaagggtcaagattgtgatattcct
attcatgcctgcatcagtaacccatgcaaccatggtggaacttgtcatctgaaagaagga
gaaaaagatgggttttggtgcacttgcgcagatggatttgaaggtgaaaactgtgaaata
aatgttgatgactgtgaagacaatgactgcgaaaataattctacttgtgtggatggaatc
aataactatacttgcctctgtccacctgaatatacaggtgagctctgtgaggagaaacta
gatttctgtgctcaaaacctgaatccttgccaacatgactcaaagtgtatattgacaccc
aaaggttacaaatgtgactgcacacctggatacataggtgaacattgcgatattgacttt
gatgactgccaggacaacaaatgtaaaaacggagcacagtgtactgacgcagttaatggg
tatacatgtatttgcccagaaggatacagtggcttgttttgtgagttttcaccgccaatg
gttttacctcgcaccagtccttgcgataactatgaatgccaaaatggagcccagtgtatt
ataaaagagagtgaaccaatctgccagtgtttatcaggctaccagggtgaaaaatgtgaa
aaactgatcagtataaattttgtcaacaaagaatcctatctacaaattccttcagctaag
atacgcccccagaccaatatcactttgcagattgccacggatgaagacagtgggatcctt
ctctacaaaggcgataaagatcacatagcagtagagctgtaccgtggtagagtgagggtt
agttatgacacaggatcttatccagcctctgcaatttacagtgtggaaactattaatgat
ggaaatttccacattgtggagctgctagccatggatcagattctgtctttgtctgttgat
ggaggaagccccaagataattaccaatttgtccaagcagtccactctaaattttgactct
ccgctgtatgtaggaggcatgcctgtgaaaaataacattgcagctttgcgccagtctcca
ggccagaatggcacaagtttccatggttgcatccgtaatctgtatatcaacagtgaactc
caggacttcagaaacgtgccactgcaagtgggaattctgccaggttgtgagccttgtcac
aagaaagtttgtgtgcatggaacatgccatgctaccagccagtcaggcttttcctgtgag
tgtgaaggaggatggactggacccctctgtgatcaacaaactaatgacccatgtctcgga
aataaatgtgtgcatggtacctgcttgccaatcaatgcattttcatacagttgtaaatgc
ctgcagggacatgggggagtcctctgtgatgaagacgaaatgctgtttaacccctgccaa
tccatcaggtgtaaacatggcaaatgcaggctttcaggacttgggaaaccatattgcgaa
tgcagcagcggatacacgggggacagctgtgataaagaaatctcttgtcgaggggaacga
atccgagattactaccaaaagcagcaagggtatgctgcgtgccagacgaccaagaaggta
tcgagactagaatgtaaaggaggatgttcaaccgggcagtgctgtggaccactaaggagc
aagagacggaaatactcttttgaatgcactgatgggtcgtcatttgtggatgaggttgag
aaagtggtgaagtgtggctgtacaaattgtccctcctaa
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integrated database retrieval system
