Anas platyrhynchos (mallard): 101800274
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Entry
101800274 CDS
T02816
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03013
Nucleocytoplasmic transport
apla05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101800274 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
101800274 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apla03019
]
101800274 (NUP98)
03036 Chromosome and associated proteins [BR:
apla03036
]
101800274 (NUP98)
Messenger RNA biogenesis [BR:
apla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101800274 (NUP98)
Chromosome and associated proteins [BR:
apla03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
101800274 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Peptidase_M26_N
Motif
Other DBs
NCBI-GeneID:
101800274
NCBI-ProteinID:
XP_038034566
Ensembl:
ENSAPLG00000012135
LinkDB
All DBs
Position
1:complement(206456352..206492379)
Genome browser
AA seq
1815 aa
AA seq
DB search
MFNKSFGTPFGGSTGFGTTSTFGQNAGFGTTSGGAFGTSAFGSNNNTGGLFGSTQTKPGG
LFGSTTFNQPATSSTSTGFGFGTSTGTSNSLFGTTSTGGGLFSSQSNAFAQNKPAGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPTSFTAAPTGTTIKFNPPTGTDTMVKSGVST
NINTKHQCITAMKEYESKSLEELRLEDYQANRKGPTNPVGAGATAGLFGSSTATSSTATG
LFGSSTTNTGFSYGQNKTAFGTSTTGFGTGTTGGLFGQQPQTTSLFNKPFGQATTTQNTG
FSFGNTNTLGQPNTNTMGLFGATQPSQPGGLFGTAANTNAGTGFGTGTSLFGQTNTGFGV
GGSTLFGSKPAGFGTTTTSAPSFGTTTGGGLFGNKPTLTLGTNTNTSNFGFGANTAGNSL
FGNKPATGTLGTGIGTGFGTALGAGQTSLFGNTQPKLGGTLGTGAFGAPGFNTSTATLGF
GAPQPAVALTDPNASAAQQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPA
AQKALTTPTHYKLTPRPATRVRPKALQSAGSAKSQLFDGLDDDEPSLSNGAFMPKKSIKK
LVLKNLNNSSLFSPVNRENEDLASPSEYPENGDRFFLSVPSDENHRQDGEREEEEDQHEV
TRFYTNPIAKPIPQTPENTVHKHQNNVDDTIVALNMRAALRNGLEGSSEDASFHDDSLQD
EREEESETMHHVHPAGIVLTRAGYYTIPSMEELARFTNDRNECIVTDFTIGRKGYGSIYF
EGEVNLTNLNLDDIVHIRRKEVIVYPDDERKPPIGEGLNRRAEVTLDGVWPTDKTSRCLI
KSPERLAEMNYEGRLESVSRKQGARFKEYRPETGSWVFKVAHFSKYGLQDSDEEEEEHPL
KVDTKKLKTTPVPPPGHLPPQQMALNGKPTPPSQTPEVEQLGRVVELDSDMADITQELPQ
ESVLEDNMMEEQEAVPASTHIASTLGINPHVLQIMKASLLADEEDLDLILDHYPGKQAIK
MDTSQEICSPRLPISKAHGQKRCSVGGLLQSKFANLICQPPGTAVQDFKGLRTSGSSPSA
ALWSAASPLASAFTVPPSAPEVQVKTVGVRRQQGLVPLDKSITHRKGKLLMDMALFMGRS
FRVGWGPNWTLVNCGDRLSRSSEVEDTQCESVEYGFLPAPVAPKLLSESSFKVHVEKVSL
EQRKMDRDKQLYLIPLEIKLKHSTVHMDEQCPLLAPNPGVSVIHDYSDWVRKASEDPAVT
ETVVKHWCLTWTLCEAIWGNLKELDASLEEPSEYNLALERRRAFSRWLSETAAARIDEEV
SLSRHDNHVEAVFSFLTGRRIGEACRLAQQSGDHRLALLLSQLAGSQPLRDLLTMQLVDW
HRLQADCFIQEERLRIFALLAGKPVWQLSERVSINVCSQLDWKRCMAVHLWYLLPPTASI
SQALAMYESAFQNTPESEKYACCPLPPYLEGSGCVIEEDDNAGRPLRDVCFHLLKLYSDR
HYDLDHLLDPRSITSDPVDYRLSWHLWEVLRALNYTHLLKQGQGVLNASYAAQLESEGLW
EWAVFILLHEPDTHIREKAVRELLHRHCVLSETPESWAKETFLTQRLCVPAEWIHEAKAV
RARMEGDRHKEALFLFKAGHWNQCHKLVVRHLASDAIINENYKYLKGFLEDLSPPERSVL
IQDWEVAGLVYLDYIRVIEMVDRIQQLDCSPYELERLHTKVTSLCNRIEQIECHNARDRL
AQSDMAKRIANLLRVVLSLQHTPEPVSDSTPAVQRVPLRLLAPHIGRLPMPEDYALEELR
SLTQSYLRELTVVTQ
NT seq
5448 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaatccttcggaactccgtttggaggcagcactggctttgggacaacttca
acatttggacaaaatgctggctttggtactacgagtggaggagcgtttggcacctcagcc
ttcgggtcgaacaacaacaccggaggcctcttcggcagcacacagacaaagccaggaggg
ttgtttggttcgacgacgtttaaccagccagccacctcctccacaagtactggctttggg
tttgggacatcaacagggacgtcaaacagcctgtttggcaccaccagcaccggtggaggg
ctcttctcatcccaaagcaatgccttcgcgcagaacaagcccgctggcttcggaaacttt
ggaacaagcaccagcagtggcggcctcttcggaaccacaaacacaacttccaatcctttt
gggagtacatctggctctctgttcggcccaactagtttcactgctgctccaactggcaca
accattaagttcaatccaccaaccggtacagatactatggtaaaatctggagttagcact
aacattaataccaagcaccagtgcattactgctatgaaggaatatgaaagcaaatctctc
gaggagctccgtttagaagactaccaggcgaacaggaaaggccccacaaaccctgtagga
gcaggagcaactgcaggcttgtttgggtcttctacggctacgtcaagtacagctacagga
ctcttcggctcttctactactaatacaggcttttcttacggacagaataaaactgctttt
ggaactagtacgactggctttggaacaggaacgacagggggtctgtttggtcagcagcct
caaactacaagcctgttcaacaaaccttttggtcaagccacaacaacgcagaacaccggc
ttttcctttggcaatacgaacacgctggggcagccaaacacaaacacgatgggtctcttt
ggggcaacccagccctcgcagcctggaggcctctttggaacagctgccaatacaaacgct
ggtactggatttggaacgggaactagtctttttggacaaactaacacaggatttggtgtt
ggcggttcgaccctgtttggtagcaagccggctggatttggaaccaccacgaccagtgct
ccctcgtttggcacaaccactggcggcgggctctttggtaacaaaccaaccctgacttta
ggaaccaatacaaacacttccaattttggttttggtgccaacactgctggaaatagctta
tttggaaataagcctgcaactgggactctgggaactggaattgggacagggtttggaaca
gctcttggggcaggacagacttctttatttggaaatacccagcctaaacttggtggaaca
ctgggaacaggagcatttggagcaccggggttcaatacatcaacagcgactctgggcttt
ggagcccctcagcctgctgtagcactgacagaccctaacgcatcagcggcccagcaggcg
gtcctccagcagcatctcaatagcttgacttactcaccctttggagattccccgctgttc
agaaaccccatgtcagatccaaagaagaaagaagagaggctgaaaccaacaaacccagca
gctcagaaggccttaacgacacccacccactacaaactgactccgcgccccgcgaccaga
gtgcgaccaaaagctttgcagtcagctggctctgcgaaatcccagctcttcgatggtctt
gatgatgatgagccgtccctgtccaacggcgcgttcatgcccaagaagagcatcaagaag
ttggttttgaagaatctcaacaatagcagtctcttctcacctgtcaatcgtgaaaacgaa
gacctggcttctccgtcagaatatccagagaatggagacaggttctttttgtcagtacct
tctgatgaaaaccacagacaagatggtgagcgagaggaagaggaggatcaacatgaagtg
accaggttttacactaaccccatcgccaagcccatcccccagactcccgagaacactgtg
cacaaacaccagaacaacgtggacgacaccatcgtggctctgaacatgcgggcggccttg
cgaaatggtctggaaggcagcagtgaagatgcctcgtttcacgacgattcccttcaagat
gaacgtgaagaggagagtgaaaccatgcatcatgtgcatcctgcaggaattgttctaaca
agagctggctattacaccatcccgtccatggaggagcttgctagatttaccaacgacaga
aatgaatgtattgtgactgacttcaccatcggccgtaaaggttatggatcaatttacttt
gaaggagaagtaaatctaacaaacttaaatctggatgacattgtacatatccgtaggaaa
gaagtgattgtttaccccgacgatgaaagaaaaccacctattggtgaaggtttaaataga
cgagctgaagtgacgttagatggagtctggcctacagataaaacatctcgttgcttgata
aaaagccctgaacgacttgcagagatgaattacgagggtagactcgagtctgtatctcgg
aagcagggcgctcgattcaaggaataccgtccagagaccggatcttgggtgtttaaggtg
gcacacttctccaagtatggcttgcaagattcagacgaggaagaggaagagcatccttta
aaagtggacacaaagaagttaaaaaccacacctgtgccacctccagggcacctgccaccc
cagcaaatggccctaaatggcaagcccacgcctccatctcagaccccagaagtggagcag
ctgggcagggttgtggagctggacagtgacatggcagacatcacccaggagcttccccag
gagtccgttctggaagataacatgatggaagagcaggaggcagtgcctgcttcaacccac
attgcatcaacgctgggtattaacccccacgtcttacagattatgaaagcttccttgctt
gctgatgaagaggacctagatttgatcctggatcattatcctgggaagcaagctataaag
atggatacttctcaagagatctgttctccaaggctccctatttcaaaagcacacggacag
aaaagatgctcagttggtgggctgctgcagtcaaaatttgctaatctcatttgccaaccg
cctggcactgctgtgcaagacttcaagggactgaggacttcgggcagttccccctctgct
gccctttggtcggcagcttctcctctagcatctgcgttcactgtgcctccctcagccccg
gaggtgcaggtgaagacggtgggtgtccgcaggcagcaggggctagtgcccctggacaaa
tccatcacccacaggaaggggaagctgctgatggacatggcgctcttcatggggcgctcg
tttcgtgttggctggggacccaactggacgctggtcaattgtggagatcggttaagtagg
tcaagcgaagtggaagacactcagtgtgagtctgtggagtacggattcctgcctgctccg
gttgctcccaaattactctcagaatcttctttcaaggttcatgtggagaaggtgagcttg
gaacaaaggaagatggacagagacaaacagttgtatctcatccctctggagatcaagctg
aaacacagcactgtccatatggatgagcagtgtcctcttctagcacccaatcctggagtt
tctgttattcatgactattctgactgggttagaaaggcatccgaggatcctgctgtgaca
gaaaccgttgtgaagcactggtgcttgacgtggacgttgtgtgaagcaatctgggggaac
ctgaaggagttggacgccagcctggaggagcccagtgaatacaacctggccctggaacgc
aggagagccttctctcgctggctgtcagagaccgctgcggcacgaatagacgaggaggtc
tctttgtcccgacatgataaccacgtggaggccgtgttcagcttcctcactgggaggaga
attggcgaggcttgcagactggcacagcagtcaggtgaccaccggcttgctctgctcctg
tcccagctagcaggcagccagcccctccgcgacctcctcaccatgcagctggtggactgg
caccggctgcaggcagactgcttcatccaggaggagaggctgcgcatcttcgcactgctt
gcagggaagcctgtgtggcagctctctgagagagtaagcatcaacgtgtgctcgcagctg
gactggaagcgctgcatggctgtccatctctggtacctgctgcctccaacagcttctatt
tcccaggcccttgccatgtacgagtcagcatttcagaacacaccagagtctgaaaaatac
gcctgctgccccctgcctccttacctagaagggtctggttgtgtaatcgaagaagacgat
aatgcgggaagacctctgagagacgtctgtttccatttgttaaagctctacagtgacagg
cactatgaccttgaccacctgctggatccaaggagtataacatctgaccctgtagattat
cgtctcagctggcacctgtgggaggtgctcagagccctgaactacacccacctcctcaag
caggggcagggagtgctgaatgccagctacgctgcccagcttgaaagcgaaggcctttgg
gaatgggctgtttttatactgctgcacgagcctgatactcacatacgggaaaaggcagtg
cgagaactcttacaccggcactgcgtgctgtccgagacacccgaatcgtgggccaaggag
accttcctgacacagaggctctgtgtccctgctgagtggatccatgaagcaaaggctgtt
cgagcaaggatggagggcgaccggcataaagaagccctcttcttgttcaaggctgggcac
tggaaccagtgtcacaagcttgttgtcaggcacttagcctcagatgctattattaatgag
aactacaagtacctaaaaggattcctggaagacctctcccctcccgaacgcagcgtgctc
atccaggactgggaggtggcagggctggtctatctagattacatccgtgttatcgagatg
gttgataggattcaacagctggattgttccccatatgagctggagcgtttgcataccaaa
gtgacttcgctgtgcaacaggatagagcagatagagtgccacaacgcgagggaccggctg
gctcagtcagacatggccaagcgcattgccaacctgctcagggtggtcctcagcctgcag
cacaccccggagcccgtctccgactccacccctgccgtgcagcgcgtcccccttcgcctg
ctggctccccacatcgggcggctgcccatgccggaggactatgccctggaggagctgcgc
agcctcacccagtcgtacttacgggagctgacagtggtgacacagtga
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integrated database retrieval system
