Anas platyrhynchos (mallard): 101800495
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Entry
101800495 CDS
T02816
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X2
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03250
Viral life cycle - HIV-1
apla04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
101800495 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
101800495 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apla03400
]
101800495 (SAMHD1)
DNA repair and recombination proteins [BR:
apla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
101800495 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
HD_assoc_2
Pdc1_Ge1
PDEase_I
I-TevI_DNA-bd
Motif
Other DBs
NCBI-GeneID:
101800495
NCBI-ProteinID:
XP_005018072
Ensembl:
ENSAPLG00000014604
LinkDB
All DBs
Position
21:complement(12391201..12415625)
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AA seq
543 aa
AA seq
DB search
MLSVSVCGLAACSLPHERLKVLACLNKLRQTVDIMKVFNDPVHGHIEMHPLLVRIIDTPQ
FQRLRYIKQLGGTYFVFPGASHNRFEHSLGVGYLAGCLVRALKERQPELDITQRDILCVE
IAGLCHDLGHGPFSHMFDGRFIPLAREGLKWKHETASVQMFEHLVTSNGLEEVMKSYGLV
LEEDMIFIKEQIGGPIDENICEKSWPYHGRPKEKSFLYEIVANKKNGIDVDKWDYFARDC
HHLGIQNNFDYRRLIKFTRVCEVENQKHICARDKEVGNLYDMFHTRNCLHRRAYQHKIGN
IIEIMITEAFQKADRFIEIEGSEGKLYQISTAMEDMEAYTKLTDNIYLEILHSSRPELNE
AREILRKIERRELYKFLGETQPEKVNEIPKDEYDGLADEIANSKPEKNPPNVDLKAEDFI
VDVISMDYGMKDQNPIDNVLFYCKADPSKAVKISKEQVSRLLPRIFAEQLIRVYCKNLDP
NIVSAAKQYFVQWCIKRDFTKPQDSDVIAPHLTPMKQSWNNRSGDEFNTASEPSCKQRLS
FNK
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcgtgtcggtgtgtgggttggctgcctgcagcctcccacatgagaggttgaag
gtgctcgcctgcctgaacaaactgagacagacagtggacataatgaaggtttttaatgat
ccagttcatgggcatattgaaatgcaccctcttctggttcgcatcattgacacacctcag
tttcagcgcctgcgatacattaagcagctgggtggcacttactttgtttttccaggagcc
tctcacaaccgctttgaacactctttaggggtggggtacctagcaggatgcctggtacgt
gcactgaaggagagacaaccagaattggatataacccaacgagacatcctctgtgtagaa
attgcgggtctttgtcatgatttgggtcacggaccattttcacacatgtttgatggaaga
tttattccactcgctcgtgaaggtttgaagtggaagcacgaaactgcttctgttcaaatg
tttgagcacttagtcacatccaatggactagaagaagtcatgaagtcatatggtcttgtc
ctggaagaagatatgatcttcatcaaggaacaaataggagggcctatcgatgaaaacatt
tgtgagaaatcgtggccctaccatggtcgaccaaaggagaagagtttcctgtatgagata
gtagctaacaaaaaaaatggcattgatgttgacaaatgggattattttgcaagggattgc
catcacctaggaatccagaataattttgattataggcggttaattaaattcactcgggtc
tgtgaagtagaaaaccagaagcatatctgtgcccgtgacaaggaagttggaaatttgtat
gatatgttccacacacggaattgcctgcatcgacgagcataccagcataagattggcaac
atcattgaaataatgattacagaagcctttcagaaagcagacaggtttattgaaatagaa
ggctctgaaggaaaattgtaccagatttctacagcaatggaagacatggaagcctacact
aagctaactgataatatctacctggaaattctgcactcaagccgtccagaactgaatgag
gcacgagaaattttgcgtaaaatagaacggcgtgaattatacaagtttctaggagagact
caacctgaaaaagtaaatgaaattccaaaggatgaatatgatggcctggcagatgaaatc
gctaattccaagccagaaaagaatcctccaaatgtggatctaaaagctgaagacttcata
gttgatgttatcagtatggattatggaatgaaagatcagaatcccattgataatgttctc
ttctattgcaaggctgatccttccaaggctgtcaagatcagtaaagaacaggtttcaagg
cttttacccaggatatttgcagaacagcttattcgggtttattgcaaaaatctggatcca
aatattgtttcagctgcaaaacagtatttcgttcagtggtgtataaagagggatttcacc
aaaccacaggatagtgatgtgattgcccctcatctaactccaatgaaacaaagctggaat
aacagaagtggggatgaattcaatacagcttcggaaccaagttgcaagcaaaggctttct
ttcaataagtaa
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