Anas platyrhynchos (mallard): 101800648
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Entry
101800648 CDS
T02816
Symbol
CNOT6L
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101800648 (CNOT6L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apla03019
]
101800648 (CNOT6L)
Enzymes [BR:
apla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
101800648 (CNOT6L)
Messenger RNA biogenesis [BR:
apla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101800648 (CNOT6L)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101800648 (CNOT6L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_1
Motif
Other DBs
NCBI-GeneID:
101800648
NCBI-ProteinID:
XP_027311897
Ensembl:
ENSAPLG00000003448
EnsemblRapid:
ENSAPLG00030028546
LinkDB
All DBs
Position
4:complement(15740274..15770821)
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AA seq
590 aa
AA seq
DB search
MSLLPAAPPPPPPPPPRRQPRRMQMLSLRSSGVCAARRLTGMPKEKYDPPDPRRIYTIMS
AEEVANGKKSHWAELEISGRVRSLSTSLWSLTHLTALHLNDNNLTRIPPDIAKLHNLVYL
DLSSNKLRSLPAELGNMVSLRELLLNNNLLRVLPYELGRLFQLQTLGLKGNPLSQDILSL
YQDPDGTRKLLNYMLDNLAVHPEQLPPRPWITLKERDQILPSASFTVMCYNVLCDKYATR
QLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQYFTLFLPALKERGYDGFFS
PKSRAKIMSEQEKKHVDGCAIFFKTEKFTLVQKHTVEFNQVAMANSEGSEAMLNRVMTKD
NIGVAVVLEVHKELFGASIKSLHVDKQLLIVANAHMHWDPEYSDVKLIQTMMFVSELKNI
LEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLSNGIVADNHKDFKELRYNECLM
NFSGNGKNGASEGRITHGFQLKSAYENNLMPYTNYTFDFKGVIDYIFYSNTHMNVLGVLG
PLDPQWLVENNITGCPHPHIPSDHFSLLTQLELHPPLLPLVNGVHLPNRR
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgctgccggccgccccgccgcctcctcctcctcctccgccccgccgccagccg
cgccggatgcagatgctgtctctgcgaagcagtggcgtgtgtgcagcccggagactaaca
gggatgccaaaggaaaaatatgatcctcccgatcctcgcaggatttacaccatcatgtca
gcagaagaggtagccaatgggaagaagtctcactgggccgaattagagatctcgggtaga
gtgcggagcttaagtacgtcgctttggtcgctgacgcacttgactgctctacacctcaat
gacaacaatctgactcgcattccacctgatattgccaagcttcataatctggtttacctg
gatctgtcatccaacaaactcagaagtttaccagcagaactaggaaacatggtatctctc
agggaattgcttttaaataacaatctgttacgggttttgccttatgaacttggacggctc
ttccagctacaaaccctaggtttgaaaggcaatcctttatcacaagatattctcagcctc
taccaggatccagacggaactcgaaagctactgaactacatgcttgacaatctagcagtt
catccagagcagctgcctccaaggccatggattactttaaaagaacgagaccaaattctg
ccctcagcttcattcacagttatgtgctacaatgtgttgtgtgataaatacgccactcgg
cagctctatggctactgcccgtcttgggcgctgaactgggagtatagaaaaaagggaatc
atggaagaaatcgtcaactgtgatgcagacatcattagtcttcaggaagtggaaacagag
caatacttcaccctttttctgccagcattgaaagaacgaggatatgacggattcttttct
ccaaagtcacgtgccaaaatcatgtctgagcaggagaaaaagcatgtggatggctgtgca
atattcttcaaaactgagaagtttacgctggtgcagaagcacaccgtggagttcaaccag
gtggcgatggccaactcggaaggttcggaagcgatgttaaatagagtgatgacgaaggac
aacatcggagttgctgtggtgttagaggtgcacaaggaattatttggagcaagtataaaa
tctcttcatgtggacaaacagctgcttattgtggccaatgcccacatgcactgggaccct
gaatactcggatgtgaaactcattcagactatgatgtttgtctcagaactgaaaaatatc
cttgagaaagcctcaagcaggcctggtagcccaacagcagatcccaattctatcccactg
gtgctgtgtgcagatcttaactcattgcctgattcaggtgtagtggaatacttaagcaat
ggcatagtagctgacaaccacaaggacttcaaggagttgcgttacaacgagtgtctcatg
aacttcagcggcaatgggaaaaacggggcttctgaaggaagaattacacatggcttccaa
ctcaagagcgcctatgaaaacaacttgatgccttacaccaattacacttttgatttcaaa
ggtgtgattgactacattttctattccaacactcacatgaacgtgcttggtgtcctgggg
cctttggaccctcagtggctggttgagaacaacatcactgggtgtccacaccctcacatc
ccttcagaccacttctcactgttaacacaactcgaactccatcctccgctcctgcctctt
gtcaacggtgtgcacttgccgaacaggaggtag
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