Anas platyrhynchos (mallard): 101800662
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Entry
101800662 CDS
T02816
Symbol
SOX13
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SOX-13
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
apla03000
]
101800662 (SOX13)
Transcription factors [BR:
apla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
101800662 (SOX13)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
101800662
NCBI-ProteinID:
XP_027300938
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All DBs
Position
27:complement(2852289..2866469)
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AA seq
627 aa
AA seq
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MSPAVASLGMSMRSPVSPHLELDGAGSMVNCTIKTEEKKEGGYESPPGAAPSAEPRPSDP
PGPPPREGTDPQALPQESHSPTSDALEPRRSAFEPAVSSQEKLDFNKNLKEVMPTIEKLL
SSDWKERLLGRNAAETKEVKGTQESLAEKELQLLVMINQLSTLRDQLLTAHSEQKNMAAM
LFEKQQQQMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFTPSHQPL
PVTQDPQIALPIQPIPCKPVDYPVQLLHSPPPPTLKRPGGSSHLQMQETSQPLNLTAKPK
GSELPSASSSPSLKMSSCQSLTPSHGATRDLQTSPSNLPLGFLGEGDAITKAIQDARQLL
HGHGGAMEGALSHPYRKDHVGLDASPVKERLEEAPAHRLDEALLSCEMDGSRHFPESRNN
NHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLS
RQHLEKYPDYKYKPRPKRTCIVEGKRLRVGEYKALMRNRRQDARQGYLIGPQGSQMPPSS
SDVLYPRAVGMQLTPPLMEHYLPRSVDPNMPVIVNTRSLKEGDGGGGGGGGGDDGHSVAD
GEMYRYSEDEDSEGEDKSDGELVVLTD
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgagtccggctgttgcatccttagggatgtccatgaggagccccgtttctccccacctg
gagctcgatggggcgggcagcatggtgaactgcaccatcaagacggaggagaagaaggag
ggcggctacgagtccccgccgggggctgcccccagcgccgagccccgacccagtgacccc
ccgggaccacctccgagggagggcacggacccccaggctctgccacaggagtcccattcg
cccaccagcgatgcgctggagccccggcgctcggccttcgagccggctgtcagcagccag
gagaagctggacttcaacaagaacctaaaagaggtgatgccaaccatcgagaaattgctg
tccagtgactggaaggagcggctgctgggccgaaacgctgccgagaccaaagaagtgaag
ggaacccaggagagcctggcggagaaggagctgcagctcctggtgatgatcaaccagctg
tccacgctgcgggaccagctcctgacggcgcactcggagcagaagaacatggctgcgatg
ctcttcgagaagcagcagcagcagatggagctggcgcggcagcagcaggagcagatcgcg
aagcagcagcagcagctcatccagcagcagcacaaaatcaacctgctgcagcaacagatc
cagcaggtcaacatgccgtacgtcatgatccccgccttcacccccagccaccagcctctc
cccgtgacgcaggacccccagatagcgctgcccatccagcccatcccctgcaaaccagtg
gattaccccgtgcagctgctgcacagcccccctcctcccacgctgaagagacccggcggc
tcgagccacctccagatgcaggagacctcgcagccgctgaacctgacggccaaacccaaa
ggctccgagcttcccagtgcctccagctcgcccagtttgaagatgagcagctgccaatcc
ctcacgccgagccacggggccacgagggacctgcagaccagcccgtccaacctgcctctg
ggcttcctgggcgaaggcgatgccatcaccaaagccatccaggacgcgcggcagctgctg
cacggccacggcggggccatggagggcgcgctcagccacccctaccgcaaggatcacgtc
ggcctggacgcttccccggtgaaggagcggctggaggaggcccccgcgcaccgcctggac
gaggctctgctcagctgcgagatggacggctcgcggcacttccccgagtccaggaacaac
aaccacatcaagcggcccatgaacgccttcatggtgtgggccaaggatgagaggaggaag
atcctgcaagccttccccgacatgcacaactccagcatcagcaagatcctgggttcccgc
tggaaatccatgacgaaccaggagaagcagccctactacgaggagcaggcgcggctgagc
cggcagcacctggagaaataccccgactacaagtacaaaccccggcccaaacgcacgtgc
atcgtggaggggaagcggctgcgcgtgggcgagtacaaggcgctgatgcgcaaccggcgg
caggacgcacggcagggctacttgatagggccgcagggcagccagatgcccccctcctcc
tcggacgtgctgtacccgcgggcggtgggcatgcagctgacgccccccctgatggagcac
tacctgccccgcagcgtggaccccaacatgcccgtcatcgtcaacacgcgcagcctcaag
gaaggtgacggcggtggcggtggcggcggtggcggtgacgacgggcactcggtggccgac
ggtgagatgtaccgctacagcgaggacgaggactcggagggcgaggacaagagcgacggc
gagctggtggtgctgacggactga
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