Anas platyrhynchos (mallard): 101800768
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Entry
101800768 CDS
T02816
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101800768 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apla03019
]
101800768 (BARD1)
04121 Ubiquitin system [BR:
apla04121
]
101800768 (BARD1)
03036 Chromosome and associated proteins [BR:
apla03036
]
101800768 (BARD1)
03400 DNA repair and recombination proteins [BR:
apla03400
]
101800768 (BARD1)
Messenger RNA biogenesis [BR:
apla03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
101800768 (BARD1)
Ubiquitin system [BR:
apla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
101800768 (BARD1)
Chromosome and associated proteins [BR:
apla03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
101800768 (BARD1)
DNA repair and recombination proteins [BR:
apla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
101800768 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_4
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
Ank_KRIT1
zf-C3HC4_2
zf-C3HC4
PTCB-BRCT
zf-C3HC4_4
NIBRIN_BRCT_II
ANK_LRRK2
zf-RING_10
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
101800768
NCBI-ProteinID:
XP_027316954
Ensembl:
ENSAPLG00000015564
LinkDB
All DBs
Position
7:31103053..31147112
Genome browser
AA seq
799 aa
AA seq
DB search
MAAGGQFGAAMAAGLREALRGRSGNRLDPGGQPGPTAPPGHPWALTRAALGRLERALSCS
RCAGILREPVSLGRCEHVFCLSCVGDCVGAECPVCHMPAWVQDVQINRQLDNMIQLCSKL
RHLLGADTSDSTECISTPTGSDSGNKSKKEQIKMWFSPRSRKIRCVLNKGQPKTKSDGPC
QDPSSAYHFFPSPPHEKPKPTKKPVQRQSKKMKKKHLADINKVWGLGKPEQKGGAEEKTS
KEKCVTICSQPVVLCTPEPDSPEETLPQEPLKEADSSTNVEKLEISPEVKASEEKDNSLD
ARPAHVSKEKTCAAEESPSIGNETTPLKRGREQSSLPVSSQTKRSRRAEGSNSGSAGRQA
ACLEESPQGSPISQATEPKTPVQVYSSGSKLAGTAMKTRNSAAMNSPSFPKSPSTPSASK
ACSQVGTPHSPSVFKSPGGANAVARRNYKGETLLHVASIKGDLGAVEQLLQNGADPNVKD
NAGWTPLHEACNHGHKEVVELLLQHKALVNTTGYQNDSPLHDAVKNGHVSIAELLLLHGA
SRDAVNIFGLRPVDYAESEKMKSVLMLPVKNESFSLSQLSESQSTSQARDGPLGILGSSL
SSEQQKLLNKLVTVLKARRCTEFNSTVTHLVIPDVPMPSTVKCMMAVLTGCWVLKFDWVR
ACLRSAVREQEEKYEIQGGPQRGRLNREQLLPKLFDGCYFYFLGSFSSHQKSDLVELVKA
AGGQILVRQPKPDSDVTQMINTVAYHAESTSDQRFCTQYVIYDVSSKFKPEKIRQGKVWM
APSSWIIDCVMSFQLLPVK
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcgggcaattcggagcggcgatggcggcggggctccgtgaggcgctgcgc
ggccgctccggcaaccggctggacccgggcgggcagcccggccccacggcacccccaggg
cacccctgggcgctcacccgagccgcgttggggcggctggagagggcgctgagctgctcc
cgctgcgcagggatcctgagggagcccgtgtccctggggcggtgcgagcacgtcttctgc
ctatcttgtgtgggcgactgtgtcggcgcagaatgcccagtgtgccacatgccagcctgg
gtgcaagatgtgcagataaaccggcagctagataacatgatccagctttgcagcaaactg
cggcatctgttgggcgcagacacctcggattcaacagaatgtatatccacaccaacaggc
tccgactctgggaacaagagtaagaaggaacagataaaaatgtggttcagcccgagaagc
aggaagattcggtgcgtcctgaacaagggtcagcctaagactaaaagcgatggcccttgc
caagacccatcttcagcttatcatttctttccttcccctcctcacgaaaaacccaagcca
acaaaaaagccagtgcagaggcagagtaagaagatgaagaaaaaacatctagcagacatc
aacaaagtgtggggcctagggaaacctgagcagaaaggaggagctgaggagaagacttcc
aaggaaaagtgtgtgaccatttgtagccagcccgtcgtcctgtgcactccagagcctgat
agccccgaagagacgcttccacaggagcctctaaaggaagctgactccagcacaaacgtg
gagaaattagaaatttcaccagaggtaaaagcctcagaggagaaagataatagcttggat
gcccgtcctgcacatgtcagcaaggaaaaaacttgtgctgcggaggaatccccgtcgata
ggaaatgaaactacgcctttgaaacgtggaagggagcaatccagcctcccagtttcatct
cagactaaaaggtcccgaagagctgaggggagcaacagtgggagtgcaggcaggcaggcg
gcttgcttggaggagtcgcctcagggcagccccatctcccaagcgactgaacccaagaca
cccgttcaggtttactcctctggatcaaagctcgctggcactgcgatgaagacaagaaac
tctgcagcaatgaatagtccttcgtttcccaaatctccttctactccctctgcttccaag
gcgtgtagtcaagtaggaacaccacacagtccttctgtgttcaagtcccctggtggagct
aatgctgttgcccgaaggaattacaaaggagagactttgctccacgtcgcttccatcaag
ggtgacttaggagctgttgaacagctgctgcaaaacggggcagatcccaatgttaaggac
aatgctggctggacaccgctgcatgaggcgtgtaaccacgggcacaaagaggtggtggag
ctgctgctgcagcacaaagcactggtgaacaccacgggctatcagaacgactcgcccctg
cacgatgctgtcaagaacgggcacgtgagcattgctgagctgctgcttctgcacggggcc
tcccgcgatgcagttaatatatttggtctgcggcctgtggactatgcagagagtgaaaag
atgaagtctgtgctaatgttaccagtgaagaatgaatcattttcacttagccagctgtct
gagtcacaaagcacaagccaggcaagagatgggcctcttggcatactggggagcagtctt
agttcagagcaacagaaactgctgaacaagctagtgacagtcctgaaggctcgaaggtgc
accgaatttaacagcacagtaactcatcttgttatccctgacgttccgatgccaagcacc
gtcaaatgtatgatggctgttctgactggatgttgggtcctcaagtttgactgggtacga
gcctgcctgcgaagtgcagtccgagaacaagaagagaagtatgaaatccaaggtggccca
caaagaggccggctcaacagagaacagctgctgccgaagttgtttgatggatgctacttc
tattttctgggatctttcagtagccaccagaagagtgatcttgtggagttggtcaaagca
gcaggaggccaaattctggttaggcagccaaaaccagacagtgatgtgacgcagatgatc
aacacggtggcataccatgcagaatcgacttctgaccagcggttttgtactcagtatgtc
atctatgatgtgtcttctaaattcaagccggagaaaattcgtcagggtaaagtctggatg
gccccctccagctggattatagactgtgtaatgtcatttcagctgctgcctgtaaagtga
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integrated database retrieval system
