KEGG   Anas platyrhynchos (mallard): 101800772
Entry
101800772         CDS       T02816                                 
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X1
  KO
K12879  THO complex subunit 2
Organism
apla  Anas platyrhynchos (mallard)
Pathway
apla03013  Nucleocytoplasmic transport
apla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:apla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101800772 (THOC2)
  09122 Translation
   03013 Nucleocytoplasmic transport
    101800772 (THOC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:apla03019]
    101800772 (THOC2)
   03041 Spliceosome [BR:apla03041]
    101800772 (THOC2)
Messenger RNA biogenesis [BR:apla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     101800772 (THOC2)
Spliceosome [BR:apla03041]
 Complex C
  Other components
   EJC/TREX
    101800772 (THOC2)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    101800772 (THOC2)
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2
Other DBs
NCBI-GeneID: 101800772
NCBI-ProteinID: XP_038040072
Ensembl: ENSAPLG00000010614
LinkDB
Position
10
AA seq 1608 aa
MAAALPAEWIKNWEKAGKNEFLQLCRTLSENKSHDNVSFRDIQQVLYELAYHVIRGNLKH
DQASNVLGDVIELREDMPSILADVFCILDIETSCLEEKSKRDHFTQLVLACLYLVSDTVL
KERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDL
SGNITSDLILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQT
LCHILGFKFKFYQDPSGETPPSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAIIEEHKREI
VEAKQIVRKLTMVVLSSEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWQHAQS
IMDQMPPFYSTSHKPIAIALCQLVHVTIEPLYRRVGVPKGAKGSPISSLPNKRAPKQADS
FEDLRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEVGTTKKFISDRMVKFQSDGSK
QEDREKMEILFSCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRYRLYGQWKN
ETYNSHPLLVKVKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQK
YDNLITPVVDSLKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAV
FRKYPIELAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQL
KAEGGYFGQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKL
YDQCHDTLVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSK
YDELKKAEKGNKQQHKVHKYITSCELVMAPVHDAVISLHLPKVWDDISPQFYATFWSLTM
YDLAVPHSSYDREVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQLEHV
QRVLQRLKLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQKTP
NFSTLLCYDRVFSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRVIYEKECGNYPG
FLTILRATGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTK
ILPWYPKVLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPFMIPENEFHHK
DPPARNAVAATVQNGPGGAGMPTSLTINTAKLEESTAEETEKLKEKSQGAVKVINKAANT
TPKVTTSNGNSASNSKIIKEKDDKEKSGKEKDKEKKEKITAATPETKALGKDGKDKPKEE
RANKDDKAREIKEKTPKSDKEKEKAKKEEKASKEEKSKTVVTTVESKSAAEKEREKEPSR
EKDVVKDMKSKEITKGGEKIPVAGSLKSPVPRSETSESEREQKRRKVDTHSSPSHSSTVK
DNLNELKDSSAKHYINHTTPTLSKSKEREVDKKDLDKSRERSREREKKEEKDRKDRKRDH
SNSDREVPQDSTKRRKEENGTTGSSKHSKSESPSDSPRSNEKEKEKSKSKSSGKEKGDSI
KAEKMEKSSSGSKKESRHDKEKTEKKEKRESAGGKEEKKHHKSSDKHR
NT seq 4827 nt   +upstreamnt  +downstreamnt
atggcggccgcgctccccgccgagtggataaagaactgggagaaagcgggcaagaacgag
tttttgcaactgtgtcgcactctcagtgaaaacaaaagccatgataatgtcagtttcaga
gatatccaacaggttttgtatgagcttgcatatcatgttatcagaggaaacctaaagcat
gatcaagcctctaatgttcttggtgatgttatagagcttcgggaagacatgccttccatc
ttagccgatgtattctgcatattagatattgaaacaagttgtttagaagaaaaaagtaag
agggatcattttactcaactggtcttagcctgtttgtatcttgtatctgatactgtccta
aaggagcgtttagatccagaaacactggaatcactaggacttatcaagcagtctcaacag
ttcaatcagaaatctgttaaaataaagacaaagctattttataagcaacagaaatttaat
ttgttaagagaggagaatgaaggttatgcaaagctgattgcagagctggggcaagactta
tctggaaatatcactagtgatttaatccttgaaaatatcaaatctttaataggatgtttt
aaccttgatcctaacagagttttggacattatcctagaagtctatgagtgcaggcctgag
tatgatgatttctttgtaccactgatagagtcatacatgtacatgtgtgaaccacaaact
ctatgccatattcttgggttcaaattcaaattttatcaggatccaagtggtgagacgcct
ccttccttataccgagttgctgctgtcctgttgcaacataatctgatagatttggaagat
ctttatgtccatcttcttccaggggataatgccatcattgaagaacacaagcgagagata
gtggaagctaagcaaattgtcagaaaacttacaatggttgtcttatcctctgaaaagact
gaggaaaaggagaaggaaaaagaaaaagaggaggagaagactgaaaagccgccagataat
cagaagcttggtttattggaagctttattaaagattggtgattggcagcatgcacaaagt
attatggatcagatgcctccgttttattctacttcacataagcctattgcaattgccctt
tgccagctcgtgcatgtgacaattgaacctttgtaccgcagggttggtgtaccaaaaggg
gcaaaagggtcaccaatttcttctttgccaaacaagagagcaccaaaacaagcagacagc
tttgaagacctgagaaaggaagtgttcaacatgctgtgctaccttggtcctcacctgtcc
cacgatcccattttattcgctaaagtggtgcgcctcggaaaagcatttatgaaagaggtt
ggaactacgaagaaattcatcagtgacagaatggttaagtttcagtctgatggaagtaag
caagaagatagagagaaaatggagatactgtttagctgtttgctgagtattaccgatcaa
gttttgcttccatctctttctttgatggactgcaatgcgtgcatgtctgaggaattatgg
ggaatgttcaaaacttttccataccagtaccggtaccgtctttatgggcaatggaagaac
gaaacctacaatagtcatccacttctggtgaaagttaaagctcaaaccatagaccgagcc
aaatatattatgaagcgtctaactaaggaaaatgtgaaaccctccggaagacaaattgga
aagctcagtcacagcaatcctacgattttatttgattatattttatcacaaatacaaaaa
tacgataacttaataaccccagttgttgattcactgaaatacctcacttcactgaattac
gatgtgttggcatactgtatcattgaagcactggcaaatcccgagaaggagagaatgaag
catgacgacaccactatttcaagctggcttcagagtctggctagcttttgtggtgccgtt
ttcaggaaatacccaattgaacttgctggcctacttcaatacgtagccaaccagctgaaa
gctgggaaaagctttgatttgcttattttaaaagaggtagtacaaaaaatggcagggata
gaaatcacagaagaaatgacgatggagcaattggaagccatgactggtggagaacaacta
aaagctgagggtggatactttggccaaatcaggaatacaaaaaaatcctctcagagattg
aaagacgcattattggaccatgaccttgcccttccactgtgcctgcttatggctcagcag
agaaatggtgtaatctttcaagagggaggggaaaaacatctgaagctggtgggaaaactg
tatgaccagtgccatgacaccctggtacaatttggtgggtttctagcatccaatctaagc
acagaggattatattaagcgagtgccttcaattgacgttctctgtaatgaatttcacaca
cctcatgatgctgcgttttttctctcgagacctatgtatgcacaccatatttcatccaag
tatgatgaactaaaaaaagctgaaaaaggaaataaacagcagcacaaggttcacaaatac
attacatcatgcgagctggtaatggcacctgttcatgatgctgtgatctctctgcacctt
cccaaggtctgggatgatatcagtcctcagttctatgctacgttctggtctttgacaatg
tatgaccttgctgtcccacatagtagctatgacagagaagtcaataaacttaaagtccag
atgaaagccatagatgacaatcaggaaatgcctccaaataaaaagaaaaaagaaaaagaa
cgttgcacagctcttcaagacaagctccttgaagaggagaagaagcagttggagcatgtg
caaagggttctacagagactgaaactggagaaggataactggcttctggcaaagtctacc
aaaaatgagactatcacaaaatttttgcagttatgtatatttcctcgctgcattttttcg
gcaatcgatgcggtttattgcgctcactttgtagaattggtgcatcagcaaaaaacaccc
aacttctccacacttctctgctatgatagagttttctctgatattatatatacagtagca
agttgcactgaaaatgaagctagtagatatggcaggtttttatgctgtatgctggagact
gtaactagatggcacagtgacagagtcatatatgaaaaggaatgcggtaactatccaggc
ttcctaactatattacgggcaactggatttgatggtggaaataaagctgatcaattggat
tatgagaattttagacacgtggtacacaaatggcattataaattaactaaggcttctgta
cactgccttgaaacaggtgaatatacgcatatcagaaacatcctgattgtgctgaccaaa
atcctcccatggtatccgaaagtgttgaacctgggtcaagccttggaaagaagagtacat
aagatatgtcaggaagagaaagagaagagacctgatctatatgcattggctatgggctat
tctgggcagttgaaaagtaggaagcctttcatgatacctgaaaacgaattccaccacaaa
gacccacctgccaggaatgctgtagctgcaacagtacaaaatgggccaggtggtgctggt
atgcctacatctctcacaataaacacagctaaactggaggaaagcactgctgaagagact
gaaaaactaaaggagaagtctcagggtgctgtgaaagttattaataaagctgccaacact
acaccaaaggtgacaacgagcaatggaaacagtgcttctaatagcaaaattattaaggag
aaagatgataaagaaaaaagtgggaaggaaaaagataaagaaaaaaaagaaaagattaca
gcagccactccagagacaaaggcacttgggaaggatgggaaagacaaacctaaggaagaa
cgggcgaacaaagatgataaagcaagagagatcaaggagaaaacaccaaaatctgacaag
gagaaggaaaaagccaagaaagaagaaaaagcttcgaaggaagaaaaatccaagacagtt
gttaccactgttgagtcaaagtcagctgcagaaaaggagagagaaaaggagccatccaga
gaaaaagatgtagtgaaggatatgaaatccaaggaaattactaaaggaggagaaaagatt
ccagtagctgggtccttgaagtctcctgttccccgatcagaaacatcagaatctgagagg
gaacaaaaacgccgcaaagttgatacccattcttctccatcacattcctcaacagtaaag
gacaacctcaacgaactcaaggactcttcagcaaagcactacattaaccacactactcca
acactgtccaagagtaaagagagagaagtggacaagaaagatttggacaaatcaagggaa
agatccagagagagagagaagaaagaggaaaaggacaggaaagaccgaaaaagggatcat
tcaaacagtgaccgagaggtaccacaggattcaactaaacgacgcaaagaggaaaatggg
acaactggttcttcaaaacatagcaaaagtgaaagtccttctgattctcctcgctcaaat
gaaaaagagaaagagaagagcaaatcaaaatcttcaggaaaggaaaaaggtgattcaatc
aaagcagaaaagatggagaagagctcctctggtagcaaaaaggaatcaagacatgataaa
gaaaaaacagaaaagaaagaaaaacgagagagtgctggagggaaggaagaaaagaaacat
cataaatcgtcagacaagcacagataa

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