KEGG   Anas platyrhynchos (mallard): 101800863
Entry
101800863         CDS       T02816                                 
Symbol
FOCAD
Name
(RefSeq) focadhesin isoform X1
  KO
K27498  focadhesin
Organism
apla  Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:apla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:apla03019]
    101800863 (FOCAD)
Messenger RNA biogenesis [BR:apla03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     101800863 (FOCAD)
SSDB
Motif
Pfam: Focadhesin DUF3730
Other DBs
NCBI-GeneID: 101800863
NCBI-ProteinID: XP_038026105
Ensembl: ENSAPLG00000003581
LinkDB
Position
Z:36884771..37002300
AA seq 1803 aa
MSDDIKKRFEFPNTVIQSQAVGHLIAAVLKENVSSGKIKQASQQTPALNLLWEKCCSENV
AVRTACSEGLVALVAENHAELEYILHGALNLIPSARNVHGLVKTVWKLLQIQAVQRGREG
DEAVQKLYGIRNSPHPLITILENRPECWPVLLQQITVFFQQCPERAQSSCVGIMAPFLRY
LYCEPSQLRENAELRMGLLRILLQPRGPKHTEAPSVLERQILQLLYDLIPHLQLKDLPQV
TEALFFLQELFLSLLRYPTFWKDQLSQFCLQLICFCEVCLNITGECSSLISLIEDNFELL
KEVFPAEQCIIGLAFLLLQTPESQQKSVLSLACKILSSSETQNVSATALVLVMPVLQILS
SSSVGDCLQEDDSGATRQQLAINLLGMLQEEGVKDRKEMMSCKLLFPITSSYSSLYTTWK
IVELMKEKTAVTGWLSSVKSLLPITTQVPAHVFLLLAYLLIQENGDSLRDVLQTATEVAK
ADCSQVPNLIPVLIFKLGRPLEPALYRDILYTLPALGVHKVCVAQILRTIHTLGSTPKLR
AVTLRMMTALWERQDRIYPELQKFLATSDVPSLAVDKDAQWEKLIAKAACIRDICRQRPY
QHGADMLAAISQVLNECTKPDQASPAAIVLQGLQALCEAEVVCIRSTWNALSPKLSCDTR
PLILKALNELFALVPSLTVNTNEYEKFKAQVISFLWKNTQNKDAIVAVSAYKALSSFGSE
EHTILHLPEQARGEINPLEETDMNEEEEEKEMDLCVPGSSYIKLLFLTPASVLGAFEEFA
TSLVKQEMTNMPRGVYHSALRGAATRSDQGKTVAGVPNFLLKMYERNKQPGMTPGLAAGM
LLCYDLPVHIGKDGKPINRFLASRGHNFQQMLVALIHEVNIQPSEWHRSILLPQSWLGFM
SRTYNAVLQGRQAKLEMDLKQGKEDLEDVQYKQFTAWLWVRDMLTDVIKGASKDSPVVKG
NSILALTGLAVAVAKYESSLSSDNEGMPETEPDFLPTQQWIYMVIETLFSIVNSRYQAKG
QVFPWFYQKSYSGENTASAIARSCAAVALSLLVPVIIVSCKEKVEEVLNMLTARLPGKPN
ADESQAVQIHVGLALGMFISRLCEEKVSEVPGQQMNLVLMKSLNALEECCFDSSLEYNTG
CILGVGLVLSLMSYSSQTESRVHVSASLRKLCKYLENSEDQSRSVQEVLSYSVACSCVSA
FSVGIIEAAEAEDAMNKLRTLVEDNQQTSAFALALGTIVHGLSVCGHGKAEDLRNKLMPA
WIKTLIAEGSPTMQRLAAVNGLVALVGSEGGMIQLKSESIQSSQFQSMLNEVIRTLTQII
SFSGQIGLQTNAAGLLGHLHMSCLSSTQSRASVPPDFSYLPENSFIRAAIDFAIESGKKG
PESVPAQLLKVALAPIAIVGESHQYPPVNWASVLSPLMRLNFGDEVKHLCLELAVTQAQS
SQNAAMLLGMWVAPPLVYSLSVKTQKYLLVSLPLWMKHVAEDKLQSFTEVFLTQQFEMKS
HTKETEICQCVLQGLMQAMKIPNPAQYCWSFLCQAAEKIYELLPNEIQRGELEMYVSVAK
CISEMGDSEIDRIVQISKNNIEKAIFTKLYLISQGRLPLMNLSAMIYALTGCYQKESIAW
MFLHSFYHARIVSHENTGVLKRMDWLLDLMGYIRNLAFKSTPIQNVDLKEFIDFLLWLFA
ASVVAWADHGAPLLLGLSASWSSWNHQTVLPELSKDHIGKHSTDKIAVQETLTLLPSSIF
LLLAKEPWKEQTQKFIDWLISMVESPKEALSKSSTDLLKATLLALRSLAEFKKKAVWTKA
YQW
NT seq 5412 nt   +upstreamnt  +downstreamnt
atgtcagacgacatcaagaagaggtttgaatttcctaatacagttattcagtcacaggct
gtgggtcatctgattgctgcagtactgaaagaaaatgtttcttcagggaaaatcaagcag
gcatctcagcagactcctgctctgaacttgctctgggagaagtgctgcagtgagaatgtt
gctgtgagaacagcctgctctgagggcttggtggcacttgttgcagagaaccatgctgag
cttgagtatattcttcatggagctctcaacctaattccctcagcgaggaatgtgcatggt
ttagtaaaaactgtttggaaattactacagattcaagctgtacaacggggaagagaagga
gatgaggccgttcagaagctgtatggaatcaggaacagtcctcatccattaatcaccatc
cttgaaaacagacccgaatgctggccggttctactgcaacagataacagtatttttccaa
cagtgtccagagagggcacaaagttcttgtgttggtataatggctccatttctaagatac
ctgtattgtgaaccatctcagttacgggaaaatgctgaactgcgaatgggattacttagg
attttacttcagccacgtggtccaaagcacactgaagcaccatctgtgctggaacgccag
attcttcaacttctatatgatttgattccacaccttcagcttaaagacttgccacaagtt
acagaagccttgttttttctgcaagagctgttcctcagcctgttgcgctaccccacattt
tggaaagaccagttatcccaattttgtctgcaactgatatgcttctgtgaagtgtgttta
aatataacaggagaatgttcatctttgatatccttaatagaggacaactttgagctttta
aaagaggtgtttccagcagaacagtgtataattgggctagcatttctactgctgcaaaca
ccagaaagtcagcagaagtctgtcctgagtctagcctgcaagatcctttcctcttcagaa
acgcagaatgtctcagccacagcccttgttttggtgatgcctgtgctacagattttatct
tcttcatctgttggggactgcttacaagaggatgattctggagctaccaggcagcagctg
gctataaatcttttgggaatgttacaagaggagggtgtgaaggatagaaaggaaatgatg
tcctgcaaactcctttttccaataaccagctcttacagttcattgtacaccacctggaag
attgtagagctcatgaaagagaagactgcagttactggctggttatcttcagtgaaatca
ctgctacctattacaactcaagtccctgcccatgttttcctcctgctggcttatctattg
atacaagaaaatggagacagtcttcgagatgtactccagactgctacagaagtagccaaa
gctgattgttctcaggtcccaaatctgatcccagttctgatatttaaattgggaagacct
ttggagcctgcactttacagggatatattgtatacgttgcctgcactgggtgtacacaag
gtttgcgtagctcagattctacgtaccatacacacgctgggtagcacaccgaagcttcga
gctgttactttgcggatgatgaccgctttatgggaaagacaggatcgaatttatccagaa
ttacagaagttcttggcaacatctgatgtgccttctttggctgttgacaaagatgctcag
tgggaaaagctgattgctaaagctgcctgcataagagatatctgtaggcagaggccatac
cagcatggagcagacatgctggctgctatttcccaggtattaaatgagtgcacaaagcct
gatcaagcttcacctgctgctatagtattacagggtcttcaggcactttgtgaggctgag
gttgtttgcattcgttctacgtggaatgctctgtcaccgaagctgagttgtgatacaaga
ccccttattttaaaagcactgaatgaattgtttgccctggttccctcattaacagtgaat
acaaatgaatatgagaaattcaaagctcaagttatcagcttcctttggaaaaacacacaa
aacaaggatgctattgtagcagtttcagcctacaaagcactctcgtcgtttggctctgaa
gaacatacaattcttcatcttcctgaacaggcacgaggagaaattaacccactggaagag
acagacatgaatgaagaggaggaggagaaggagatggacctttgtgttccaggttcttca
tatatcaaactgttgtttctaacaccagcttctgttttaggagcatttgaagagtttgca
acatcacttgtgaagcaggagatgaccaacatgccccgtggtgtgtatcattctgccctg
agaggagctgccacacgctcagaccaggggaagactgtggcaggtgttccaaatttcttg
ctgaaaatgtatgagaggaacaaacaaccaggaatgacgccaggccttgcagctggcatg
ctgctgtgttatgatcttccagtccatatcggcaaagatggcaagcctattaatcgcttt
ctggctagcaggggacacaatttccagcaaatgttggtagcgctcattcatgaggttaac
attcaaccttctgaatggcatcgctctatactactgccacagtcctggttaggattcatg
agtcgaacctacaatgcagtcctacaggggagacaagcaaagttggagatggacttaaag
cagggaaaagaggatcttgaagatgtacagtacaagcagtttacagcatggctctgggtc
agagatatgttgactgatgtcatcaaaggtgcttcaaaagacagtccagtggtgaaagga
aactctattttagccttaactggtcttgcagttgctgtagccaaatatgaaagcagcctt
tcctcagacaatgaaggaatgcctgagaccgaacctgattttcttcctacacaacagtgg
atttatatggttatagagaccctctttagtattgtgaatagccgctatcaggctaaagga
caagtcttcccatggttctaccagaaatcctattctggtgaaaatactgctagtgctata
gctcgttcctgtgcagccgttgctttgtctctcctggtaccggttatcattgtatcatgc
aaggagaaggttgaggaagtcctgaatatgctgactgccaggttacctgggaagccaaat
gctgatgagtctcaagctgttcaaatccatgtcggccttgctttggggatgtttatctca
cgtttgtgtgaagaaaaagtcagtgaggtacctggtcagcagatgaacttagttctaatg
aagtcgctgaatgcgctggaggagtgttgctttgactccagtctggagtacaacaccgga
tgtattttgggagtaggacttgttctttcccttatgagttacagcagccaaacagaatca
cgagtgcatgtttctgcttcactgcgaaaactctgcaaatacctggaaaacagtgaggac
cagagcagatcggtccaggaggtactttcctattctgttgcctgttcctgtgtctctgcg
ttcagtgttggaatcatagaagcagcggaggctgaggacgctatgaacaagctgcggacc
ctagtggaagacaatcagcagacatccgcttttgctttagctctaggtacaattgttcac
ggtttgtcagtttgtggtcacgggaaagctgaagacctgcgtaacaaactaatgccagcc
tggataaaaactttgattgcagagggctctccaacaatgcagcgtctggcagctgtcaat
gggctggttgcactggttggttctgaaggcggcatgatacagctgaaatctgagagcatc
cagtcctcccagtttcaaagtatgctcaatgaagtcatcagaacccttacacagataatc
agtttttcagggcagattggccttcagacaaatgcagcaggacttctgggacaccttcat
atgtcctgtttgtcttctacccagagcagggcatctgttcctccagattttagctacttg
cctgaaaacagctttatcagggcagccattgactttgccattgaaagtggaaaaaaaggc
cctgaatctgttccagctcagctgttgaaagtagcactggcgcccattgcaatagttgga
gaaagtcatcagtatccacctgtgaactgggcatctgttctttcaccattgatgaggcta
aactttggtgatgaggtaaaacatctctgccttgaactggctgtgacacaagcccagtca
tctcaaaatgctgcaatgcttttggggatgtgggtggcacctcccctcgtctacagtctc
agtgtgaaaacccagaaataccttctcgtgtctttgcccctgtggatgaaacatgttgca
gaagacaaactacagtcttttacagaggtgtttctaacacaacaatttgaaatgaagagc
cacacaaaagaaacagaaatttgccagtgtgttttacagggactcatgcaggcaatgaaa
attccaaaccctgcccagtattgctggagcttcctttgccaggctgctgagaaaatatat
gagctcttaccaaatgagattcagaggggtgaactggagatgtatgtcagtgtagcaaaa
tgtatctcagaaatgggtgattcagagattgatcgcattgtccagatctctaagaacaat
atagagaaggccatcttcaccaaattgtatttaatttctcaaggcagactgcctctgatg
aacttgagtgccatgatttatgctttgacaggctgttaccagaaagagtctattgcatgg
atgttcttgcacagtttctatcacgctcgtattgtgagccatgaaaacacaggagtgctg
aaaagaatggattggctgctagacttgatgggctacatcagaaatttagcattcaagtca
acacctatacaaaatgttgaccttaaagagttcatagatttcctcctgtggctgtttgca
gcttctgtggtggcctgggctgaccatggtgcaccattactgcttggcctcagtgccagc
tggtcatcatggaatcaccaaactgtgttaccagaattgtctaaggatcatattggcaag
cactccactgacaagattgctgtgcaagagactctcactctccttccaagtagcattttc
ctcttgctagcaaaagagccttggaaagaacaaacgcagaagtttattgactggcttatc
agtatggtggaaagtcctaaggaagcactatcaaaatcttccacagacctgctgaaagct
acgcttctagccttgagatctcttgcagaattcaagaagaaagcagtgtggactaaagct
taccagtggtag

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