Anas platyrhynchos (mallard): 101800863
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Entry
101800863 CDS
T02816
Symbol
FOCAD
Name
(RefSeq) focadhesin isoform X1
KO
K27498
focadhesin
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apla03019
]
101800863 (FOCAD)
Messenger RNA biogenesis [BR:
apla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
101800863 (FOCAD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Focadhesin
DUF3730
Motif
Other DBs
NCBI-GeneID:
101800863
NCBI-ProteinID:
XP_038026105
Ensembl:
ENSAPLG00000003581
LinkDB
All DBs
Position
Z:36884771..37002300
Genome browser
AA seq
1803 aa
AA seq
DB search
MSDDIKKRFEFPNTVIQSQAVGHLIAAVLKENVSSGKIKQASQQTPALNLLWEKCCSENV
AVRTACSEGLVALVAENHAELEYILHGALNLIPSARNVHGLVKTVWKLLQIQAVQRGREG
DEAVQKLYGIRNSPHPLITILENRPECWPVLLQQITVFFQQCPERAQSSCVGIMAPFLRY
LYCEPSQLRENAELRMGLLRILLQPRGPKHTEAPSVLERQILQLLYDLIPHLQLKDLPQV
TEALFFLQELFLSLLRYPTFWKDQLSQFCLQLICFCEVCLNITGECSSLISLIEDNFELL
KEVFPAEQCIIGLAFLLLQTPESQQKSVLSLACKILSSSETQNVSATALVLVMPVLQILS
SSSVGDCLQEDDSGATRQQLAINLLGMLQEEGVKDRKEMMSCKLLFPITSSYSSLYTTWK
IVELMKEKTAVTGWLSSVKSLLPITTQVPAHVFLLLAYLLIQENGDSLRDVLQTATEVAK
ADCSQVPNLIPVLIFKLGRPLEPALYRDILYTLPALGVHKVCVAQILRTIHTLGSTPKLR
AVTLRMMTALWERQDRIYPELQKFLATSDVPSLAVDKDAQWEKLIAKAACIRDICRQRPY
QHGADMLAAISQVLNECTKPDQASPAAIVLQGLQALCEAEVVCIRSTWNALSPKLSCDTR
PLILKALNELFALVPSLTVNTNEYEKFKAQVISFLWKNTQNKDAIVAVSAYKALSSFGSE
EHTILHLPEQARGEINPLEETDMNEEEEEKEMDLCVPGSSYIKLLFLTPASVLGAFEEFA
TSLVKQEMTNMPRGVYHSALRGAATRSDQGKTVAGVPNFLLKMYERNKQPGMTPGLAAGM
LLCYDLPVHIGKDGKPINRFLASRGHNFQQMLVALIHEVNIQPSEWHRSILLPQSWLGFM
SRTYNAVLQGRQAKLEMDLKQGKEDLEDVQYKQFTAWLWVRDMLTDVIKGASKDSPVVKG
NSILALTGLAVAVAKYESSLSSDNEGMPETEPDFLPTQQWIYMVIETLFSIVNSRYQAKG
QVFPWFYQKSYSGENTASAIARSCAAVALSLLVPVIIVSCKEKVEEVLNMLTARLPGKPN
ADESQAVQIHVGLALGMFISRLCEEKVSEVPGQQMNLVLMKSLNALEECCFDSSLEYNTG
CILGVGLVLSLMSYSSQTESRVHVSASLRKLCKYLENSEDQSRSVQEVLSYSVACSCVSA
FSVGIIEAAEAEDAMNKLRTLVEDNQQTSAFALALGTIVHGLSVCGHGKAEDLRNKLMPA
WIKTLIAEGSPTMQRLAAVNGLVALVGSEGGMIQLKSESIQSSQFQSMLNEVIRTLTQII
SFSGQIGLQTNAAGLLGHLHMSCLSSTQSRASVPPDFSYLPENSFIRAAIDFAIESGKKG
PESVPAQLLKVALAPIAIVGESHQYPPVNWASVLSPLMRLNFGDEVKHLCLELAVTQAQS
SQNAAMLLGMWVAPPLVYSLSVKTQKYLLVSLPLWMKHVAEDKLQSFTEVFLTQQFEMKS
HTKETEICQCVLQGLMQAMKIPNPAQYCWSFLCQAAEKIYELLPNEIQRGELEMYVSVAK
CISEMGDSEIDRIVQISKNNIEKAIFTKLYLISQGRLPLMNLSAMIYALTGCYQKESIAW
MFLHSFYHARIVSHENTGVLKRMDWLLDLMGYIRNLAFKSTPIQNVDLKEFIDFLLWLFA
ASVVAWADHGAPLLLGLSASWSSWNHQTVLPELSKDHIGKHSTDKIAVQETLTLLPSSIF
LLLAKEPWKEQTQKFIDWLISMVESPKEALSKSSTDLLKATLLALRSLAEFKKKAVWTKA
YQW
NT seq
5412 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgacatcaagaagaggtttgaatttcctaatacagttattcagtcacaggct
gtgggtcatctgattgctgcagtactgaaagaaaatgtttcttcagggaaaatcaagcag
gcatctcagcagactcctgctctgaacttgctctgggagaagtgctgcagtgagaatgtt
gctgtgagaacagcctgctctgagggcttggtggcacttgttgcagagaaccatgctgag
cttgagtatattcttcatggagctctcaacctaattccctcagcgaggaatgtgcatggt
ttagtaaaaactgtttggaaattactacagattcaagctgtacaacggggaagagaagga
gatgaggccgttcagaagctgtatggaatcaggaacagtcctcatccattaatcaccatc
cttgaaaacagacccgaatgctggccggttctactgcaacagataacagtatttttccaa
cagtgtccagagagggcacaaagttcttgtgttggtataatggctccatttctaagatac
ctgtattgtgaaccatctcagttacgggaaaatgctgaactgcgaatgggattacttagg
attttacttcagccacgtggtccaaagcacactgaagcaccatctgtgctggaacgccag
attcttcaacttctatatgatttgattccacaccttcagcttaaagacttgccacaagtt
acagaagccttgttttttctgcaagagctgttcctcagcctgttgcgctaccccacattt
tggaaagaccagttatcccaattttgtctgcaactgatatgcttctgtgaagtgtgttta
aatataacaggagaatgttcatctttgatatccttaatagaggacaactttgagctttta
aaagaggtgtttccagcagaacagtgtataattgggctagcatttctactgctgcaaaca
ccagaaagtcagcagaagtctgtcctgagtctagcctgcaagatcctttcctcttcagaa
acgcagaatgtctcagccacagcccttgttttggtgatgcctgtgctacagattttatct
tcttcatctgttggggactgcttacaagaggatgattctggagctaccaggcagcagctg
gctataaatcttttgggaatgttacaagaggagggtgtgaaggatagaaaggaaatgatg
tcctgcaaactcctttttccaataaccagctcttacagttcattgtacaccacctggaag
attgtagagctcatgaaagagaagactgcagttactggctggttatcttcagtgaaatca
ctgctacctattacaactcaagtccctgcccatgttttcctcctgctggcttatctattg
atacaagaaaatggagacagtcttcgagatgtactccagactgctacagaagtagccaaa
gctgattgttctcaggtcccaaatctgatcccagttctgatatttaaattgggaagacct
ttggagcctgcactttacagggatatattgtatacgttgcctgcactgggtgtacacaag
gtttgcgtagctcagattctacgtaccatacacacgctgggtagcacaccgaagcttcga
gctgttactttgcggatgatgaccgctttatgggaaagacaggatcgaatttatccagaa
ttacagaagttcttggcaacatctgatgtgccttctttggctgttgacaaagatgctcag
tgggaaaagctgattgctaaagctgcctgcataagagatatctgtaggcagaggccatac
cagcatggagcagacatgctggctgctatttcccaggtattaaatgagtgcacaaagcct
gatcaagcttcacctgctgctatagtattacagggtcttcaggcactttgtgaggctgag
gttgtttgcattcgttctacgtggaatgctctgtcaccgaagctgagttgtgatacaaga
ccccttattttaaaagcactgaatgaattgtttgccctggttccctcattaacagtgaat
acaaatgaatatgagaaattcaaagctcaagttatcagcttcctttggaaaaacacacaa
aacaaggatgctattgtagcagtttcagcctacaaagcactctcgtcgtttggctctgaa
gaacatacaattcttcatcttcctgaacaggcacgaggagaaattaacccactggaagag
acagacatgaatgaagaggaggaggagaaggagatggacctttgtgttccaggttcttca
tatatcaaactgttgtttctaacaccagcttctgttttaggagcatttgaagagtttgca
acatcacttgtgaagcaggagatgaccaacatgccccgtggtgtgtatcattctgccctg
agaggagctgccacacgctcagaccaggggaagactgtggcaggtgttccaaatttcttg
ctgaaaatgtatgagaggaacaaacaaccaggaatgacgccaggccttgcagctggcatg
ctgctgtgttatgatcttccagtccatatcggcaaagatggcaagcctattaatcgcttt
ctggctagcaggggacacaatttccagcaaatgttggtagcgctcattcatgaggttaac
attcaaccttctgaatggcatcgctctatactactgccacagtcctggttaggattcatg
agtcgaacctacaatgcagtcctacaggggagacaagcaaagttggagatggacttaaag
cagggaaaagaggatcttgaagatgtacagtacaagcagtttacagcatggctctgggtc
agagatatgttgactgatgtcatcaaaggtgcttcaaaagacagtccagtggtgaaagga
aactctattttagccttaactggtcttgcagttgctgtagccaaatatgaaagcagcctt
tcctcagacaatgaaggaatgcctgagaccgaacctgattttcttcctacacaacagtgg
atttatatggttatagagaccctctttagtattgtgaatagccgctatcaggctaaagga
caagtcttcccatggttctaccagaaatcctattctggtgaaaatactgctagtgctata
gctcgttcctgtgcagccgttgctttgtctctcctggtaccggttatcattgtatcatgc
aaggagaaggttgaggaagtcctgaatatgctgactgccaggttacctgggaagccaaat
gctgatgagtctcaagctgttcaaatccatgtcggccttgctttggggatgtttatctca
cgtttgtgtgaagaaaaagtcagtgaggtacctggtcagcagatgaacttagttctaatg
aagtcgctgaatgcgctggaggagtgttgctttgactccagtctggagtacaacaccgga
tgtattttgggagtaggacttgttctttcccttatgagttacagcagccaaacagaatca
cgagtgcatgtttctgcttcactgcgaaaactctgcaaatacctggaaaacagtgaggac
cagagcagatcggtccaggaggtactttcctattctgttgcctgttcctgtgtctctgcg
ttcagtgttggaatcatagaagcagcggaggctgaggacgctatgaacaagctgcggacc
ctagtggaagacaatcagcagacatccgcttttgctttagctctaggtacaattgttcac
ggtttgtcagtttgtggtcacgggaaagctgaagacctgcgtaacaaactaatgccagcc
tggataaaaactttgattgcagagggctctccaacaatgcagcgtctggcagctgtcaat
gggctggttgcactggttggttctgaaggcggcatgatacagctgaaatctgagagcatc
cagtcctcccagtttcaaagtatgctcaatgaagtcatcagaacccttacacagataatc
agtttttcagggcagattggccttcagacaaatgcagcaggacttctgggacaccttcat
atgtcctgtttgtcttctacccagagcagggcatctgttcctccagattttagctacttg
cctgaaaacagctttatcagggcagccattgactttgccattgaaagtggaaaaaaaggc
cctgaatctgttccagctcagctgttgaaagtagcactggcgcccattgcaatagttgga
gaaagtcatcagtatccacctgtgaactgggcatctgttctttcaccattgatgaggcta
aactttggtgatgaggtaaaacatctctgccttgaactggctgtgacacaagcccagtca
tctcaaaatgctgcaatgcttttggggatgtgggtggcacctcccctcgtctacagtctc
agtgtgaaaacccagaaataccttctcgtgtctttgcccctgtggatgaaacatgttgca
gaagacaaactacagtcttttacagaggtgtttctaacacaacaatttgaaatgaagagc
cacacaaaagaaacagaaatttgccagtgtgttttacagggactcatgcaggcaatgaaa
attccaaaccctgcccagtattgctggagcttcctttgccaggctgctgagaaaatatat
gagctcttaccaaatgagattcagaggggtgaactggagatgtatgtcagtgtagcaaaa
tgtatctcagaaatgggtgattcagagattgatcgcattgtccagatctctaagaacaat
atagagaaggccatcttcaccaaattgtatttaatttctcaaggcagactgcctctgatg
aacttgagtgccatgatttatgctttgacaggctgttaccagaaagagtctattgcatgg
atgttcttgcacagtttctatcacgctcgtattgtgagccatgaaaacacaggagtgctg
aaaagaatggattggctgctagacttgatgggctacatcagaaatttagcattcaagtca
acacctatacaaaatgttgaccttaaagagttcatagatttcctcctgtggctgtttgca
gcttctgtggtggcctgggctgaccatggtgcaccattactgcttggcctcagtgccagc
tggtcatcatggaatcaccaaactgtgttaccagaattgtctaaggatcatattggcaag
cactccactgacaagattgctgtgcaagagactctcactctccttccaagtagcattttc
ctcttgctagcaaaagagccttggaaagaacaaacgcagaagtttattgactggcttatc
agtatggtggaaagtcctaaggaagcactatcaaaatcttccacagacctgctgaaagct
acgcttctagccttgagatctcttgcagaattcaagaagaaagcagtgtggactaaagct
taccagtggtag
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integrated database retrieval system