Anas platyrhynchos (mallard): 101800923
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Entry
101800923 CDS
T02816
Symbol
SMG7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101800923 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apla03019
]
101800923 (SMG7)
Messenger RNA biogenesis [BR:
apla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
101800923 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
101800923 (SMG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
101800923
NCBI-ProteinID:
XP_027319621
Ensembl:
ENSAPLG00000015811
LinkDB
All DBs
Position
8:12924409..12972485
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AA seq
1191 aa
AA seq
DB search
MSLLCAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDL
WNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCR
VKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQ
LVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEV
KTRWSVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHITVI
NLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFMSFLGVLCKCPLQNDYQEDSGAAYP
LPAVKVSMDWLKLRPSVFQEAVVDERRYIWPWLISLLNSFQPHEEDLSNNNATPLPEEFE
LQGFLALRPSFRNLDFSKGHQAITGDKEGQQRRIRQQRLIFTGKWIADNQPRLIQCENEV
GKLLFLTEIPELLLEDSSEAKESLTLQETSIAEPLSTDGSPGLKSVLSSGRSLNNNCDAG
EKPMVTFKENIKPREMNREQGRIYPPKDVGRERRDYSKGIVANKNDGKKDNNKRKNETKK
CGLDKMQEAGKQNVAVQVKSQTEMRKTPVSEARKTPVTQTPSQASSSQFIPIHHPGAFPP
LPSRPGFPPPTYVVPPPVAFSMSTGYTFPGGVSVPGTFLQPTAHSPAGNQVQGGKQSHIP
YSQQRPSGPGPMTQGAQQTPPPSQQPLSSLPAQATAQSAGQLQVQALAQQQQQQSPTKAV
QGLGKSPPHHSGFQQYPQTDSSKQLWNPPQVQGSLGKIMPVKQSYYLQAQDPLKLFEQSL
QPPVMQQQPLEKKMKPFPMEPYNQNPSEVKVPEYYWDSSYGMADNRVMAQQSNMDRRGKR
QGVFRPEQDAVSRMTFEDPKSSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLAS
LPGRSLFKSLLEKPSELMSQSSSFLSLSGFSLNQERYPNNSMFNEVYGKNMNTSTKTEVT
PSVAHQETSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFS
NFGPIGTPDNRDRRIADRWKTDKPAMGGFGLDYLPATSSSSESSWHQPSTPSGTWAAQGP
AIEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGTMNPPH
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctgtgcgcgcagtatctccggcaggcagaagtcctgaaggctgacatgaca
gattcaaagctgggtccagcggaagtctggacatccagacaggctttacaggacttatac
cagaaaatgctagtgaccgatttggagtatgctttagataaaaaagtggagcaggacctt
tggaatcatgcctttaaaaatcagatcacgacgctacagggtcaggcgaaaaatagagca
aatccaaatcggagcgaagttcaggcaaacctttctctgttcttagaggcagctagtggc
ttctacacacagttattacaggaattgtgcacagtttttaatgtagacttgccatgtcgc
gtgaagtcttcccagctgggaatcattagcaataaacagacgcacaccagcgccatagtg
aagccgcagtccagctcctgctcttacatctgccagcactgccttgtccaccttggagat
attgctcgatataggaatcagaccagccaggcagagtcttactacagacatgcagctcag
cttgtcccttctaatggtcagccttataatcagttggctattctagcctcttccaaagga
gaccacttgaccacgattttctactactgcagaagtattgctgtgaagtttcctttccca
gctgcctccactaacctacaaaaagcactttctaaagcactggaaagtcgtgatgaggtg
aagacccgatggagtgtgtctgacttcatcaaggcatttattaaattccatggccatgtg
tacctgagtaagagtttggagaagctgagccctcttcgagagaagctggaagaacagttc
aagaggttgttattccaaaaggccttcaattctcagcagttggtacatattactgttatc
aatctgttccaactgcatcacctgcgagacttcagcaatgaaacagagcagcacagttac
agccaggatgaacagctctgctggacacagttgctggctctcttcatgtcctttcttgga
gttctgtgcaagtgccctttacaaaatgactatcaggaagactctggggctgcatatcct
cttccagctgtgaaggtttcaatggactggctgaaacttaggcccagtgttttccaggag
gcagtagttgatgaaagacggtatatatggccatggctgatttctcttctaaacagcttc
cagcctcatgaagaagatctgtccaataataatgcaacaccccttccagaagaatttgag
ttgcagggattcttggctctgagaccctcattcaggaacttggatttttccaaaggtcac
caggcgattacaggagataaggaagggcaacaacgtcggatacggcaacagcgactcatc
ttcacaggcaaatggattgctgataatcagccaaggttgattcagtgtgaaaatgaggta
ggaaagctgttgtttctgacggaaatcccggaattattactagaggattctagcgaagcc
aaagagagtctcaccttgcaggaaacatctatcgcagaaccactatccacagatggcagc
cctggactcaaatcagttctgtcctctggcagaagtctaaacaacaactgtgatgcagga
gaaaaaccaatggtcacattcaaagaaaatattaagccacgagaaatgaacagagagcaa
gggcgaatctatccacctaaagatgtaggtagggaaagacgggactatagcaaaggaata
gtagccaataagaacgatgggaagaaggataacaataaaagaaagaatgagaccaagaaa
tgcggcttggataagatgcaggaagcaggaaagcagaatgtggcagttcaggtgaaatcc
cagacagagatgaggaagactccagtgtctgaagccaggaaaacacctgtaactcagact
ccgagtcaggccagcagttcccagttcatccccattcatcacccaggagctttccctccc
cttcctagccggccagggttcccacctccgacctatgttgtccctccccctgtggctttc
tccatgagtacggggtacaccttcccaggaggcgtttctgtcccaggaaccttcctccag
cccacggctcactcgcctgcaggaaatcaggtgcaaggtgggaaacagtcccacattcct
tacagccagcagcggccctctggacccgggccgatgacccagggagctcagcaaacacca
cctccctcccagcaacccctctcatctctaccagctcaggcaacagcacagtcagcaggc
cagttacaggtccaagcactggcccagcagcagcagcaacagtccccaacaaaagctgtg
cagggcctgggaaagagcccgccacaccactctgggttccagcagtacccacagacagac
tcgtcaaagcagctctggaacccgccgcaagttcaaggttctctggggaagatcatgccc
gtaaagcagtcctattacctgcaggcccaggaccctctaaaattgtttgaacagtcatta
cagcctcctgtgatgcaacagcaacctctggagaaaaaaatgaagcctttcccaatggag
ccatataaccagaacccctcagaagtcaaggtgccagaatattactgggactcttcctac
ggcatggccgacaacagggtgatggcacagcagtccaacatggaccgcagggggaaacgg
caaggagtcttccgcccagagcaggatgctgtctccaggatgacttttgaggaccccaag
agctcccctttgcttcctccggacctgttaaagagtctggctgccttggaggaggaggaa
gagctgattttctctaatcctcctgatctttacccagctctgctggggcctctcgcctct
cttcctggacgaagcctctttaagtccctgctggaaaaaccgtcagaattgatgtctcag
tcatcatctttcctgtctctcagtggcttttctcttaatcaggaaagatatccaaataac
agcatgtttaatgaggtatatgggaaaaacatgaataccagcacaaaaacagaagtcacc
ccttcagttgcccatcaggagacttcactatattctctctttgaagggactccgtggtct
ccatcccttccagccagctcagatcattcgacaccagccagccagtctcctcactcctcc
aaccccagcagcttgccaagctcccctccaacccataaccacaattctgttcccttctcc
aacttcggacctattgggactccagacaacagagacaggagaatcgcagaccgctggaaa
acagataagccagcaatgggagggtttggtctggactatctcccagcaacatcatcatcc
tcagagagcagctggcaccagcccagcactcccagtggcacctgggcagcccaaggccct
gccatagaggactcctcagctgtgctcatggagagtctgaagtccatctggtccagttcc
atgatgcacccaggaccctcagccctggagcagctgttaatgcagcagaagcagaaacag
caacgtggacaaggcaccatgaacccgccgcattga
DBGET
integrated database retrieval system
