Anas platyrhynchos (mallard): 101800945
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Entry
101800945 CDS
T02816
Symbol
GSPT1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101800945 (GSPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apla03019
]
101800945 (GSPT1)
03012 Translation factors [BR:
apla03012
]
101800945 (GSPT1)
Messenger RNA biogenesis [BR:
apla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
101800945 (GSPT1)
Translation factors [BR:
apla03012
]
Eukaryotic type
Release factors
101800945 (GSPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
CTLH_Armc9
Motif
Other DBs
NCBI-GeneID:
101800945
NCBI-ProteinID:
XP_038042835
Ensembl:
ENSAPLG00000004261
LinkDB
All DBs
Position
15:7913232..7938938
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AA seq
619 aa
AA seq
DB search
MEANGSGSSSDSAPDCWEQADIEPGSAAGPGAAPAGGEAEAQQELLGAAFSRQLNVNAKP
FVPNVHAAEFVPAFLRGGPAPGLPPPSPPPGLPPPPHGAPVETSPEEQTASCEGSNAAAN
MEISESVVENGETEMSPEESWDHKEETSEAELGGGPSVDSGPSEESAQEMMEEEEEIPKP
KSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRET
WYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAV
LVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEK
LVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSEFCPWYIGLPFIPYLDNLPNFNRSADG
PIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDSVAPGE
NLKIRLKGIEEEEILPGFILCDSNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCI
EEVEITALICLVDKKTGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLR
DEGKTIAIGKVLKLVPEKD
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgaacggcagcggcagcagcagcgactcggctcccgactgctgggagcaggcg
gacatcgagccgggcagcgcagccggcccgggggccgccccggcgggcggggaggccgag
gcccagcaggagctgctgggggcggccttcagccggcagctgaacgtcaacgccaagccc
ttcgtgcccaacgtccacgccgccgagttcgtgccggccttcctcaggggggggccggcg
cccggcctgccgccgccctcgcccccgcccggcctgccgccgccgccccacggtgcaccc
gtagagacttctccggaggagcagacagcctcttgtgaaggttcaaatgctgctgctaac
atggaaatttcagaatctgttgtggaaaatggagagacagaaatgtccccagaagagtca
tgggaccacaaagaagaaacaagtgaagcggaactaggaggtggtccatcggtggattca
gggccttctgaagaaagcgctcaggaaatgatggaagaagaggaggaaataccaaaacct
aaatctgttgtagcgccaccaggtgctcctaaaaaagagcacgtaaatgtagtattcatt
gggcatgtagatgctggcaagtcaaccattggaggacaaataatgtatttgacaggaatg
gttgataaaagaacacttgaaaaatatgaaagagaagctaaagaaaaaaacagagaaaca
tggtacctttcgtgggctttagacacaaaccaagaagaacgagacaaaggtaaaacagta
gaagtgggtcgtgcctattttgaaactgagaagaaacacttcactattctagatgctcct
gggcataagagctttgttccaaatatgattggtggggcttctcaagctgatcttgcagtg
ctggttatttctgcaagaaaaggagagtttgaaactggatttgagaaaggtggacaaaca
agagaacatgccatgctagcaaaaacagcaggtgtaaaacatttaatagttcttattaat
aaaatggatgatccaactgtaaactggagtaatgaaagatatgaggaatgtaaagagaaa
ctggtgccgtttttgaagaaagttggcttcaatcccaaaaaagatattcatttcatgccc
tgctcaggactgactggagcaaaccttaaagaacagtcagaattctgcccttggtatatt
ggactaccatttattccctacctggataatttgccaaacttcaaccgttcagctgatgga
ccaatcaggctgccaattgtggataaatataaggatatgggcactgtggtccttggaaag
ctggaatcaggttctatttgcaaaggacaacagcttgtgatgatgccaaacaagcacaat
gtggaagttcttgggatcctttctgatgatgtagaaactgattcagtagccccaggtgaa
aatctaaagatcagactgaagggaattgaagaggaagagatccttccaggatttattctc
tgtgattccaacaacctgtgtcattctggacgcacgtttgacgcccagatagtgataatt
gagcacaaatccattatctgtccaggttataatgctgtgctgcacatccacacctgtatt
gaagaagttgagataacagccttaatctgcttggtggacaaaaaaacaggagaaaaaagt
aagacacggccacgctttgtgaaacaagatcaagtatgcattgcccgtttaaggacagca
ggaactatctgccttgagacattcaaagatttccctcagatgggtcgctttaccttaaga
gatgagggtaagaccattgcaattggaaaagttctgaaactggttccagagaaggactaa
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