Anas platyrhynchos (mallard): 101801093
Help
Entry
101801093 CDS
T02816
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101801093 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apla03019
]
101801093 (EDC4)
Messenger RNA biogenesis [BR:
apla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101801093 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
101801093 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
Uteroglobin
Motif
Other DBs
NCBI-GeneID:
101801093
NCBI-ProteinID:
XP_027321874
Ensembl:
ENSAPLG00000009238
EnsemblRapid:
ENSAPLG00030016168
LinkDB
All DBs
Position
12:11929979..11963711
Genome browser
AA seq
1402 aa
AA seq
DB search
MASSNSIDIEDATQHLRDILKLDRPGGSVNENQRPSNSYNGDLNGLLVPDPIVASDGPSL
AKPVHRNVSLGALQEKQVICLSGDDSSTCTVISAKDVEIVASSDSSITSKARGSNKVKIQ
PVARYDWEQKYYYGNLIAVSNSYLAYALRAASNGSAMVRVLSISTAERTLLKGFTGGVAD
LAFAHLNSNQLACLDEAGNLFVWRLSMDKDKIQEEILVNIKRPDNTPLNTSRRIIWCPFI
PDDNEENGEEGSQTLALLHEDRAEVWDLDIIRTNNSSWPVEVPNIKEGFIVVKGHSTYLS
EGALSPDGTVLATASHDGFVKFWQIYIEVQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQD
PEVPFWRFLITGADQNRELKMWCTVSWTCLQTICFSPDIFSSMSILPSLKVCLDLSAEYL
ILSDVQRKVLYVMELMQNQEEGKAYFSSISEFLLTHPVLSFGIQAVSRCRLRHTEVLPAE
EENDNLSVEGAQGAGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDMGASVPSHGSH
EEFAFPDHIADLGTEGLGSEKGSVHGSQPDLRRIADLPVPADFLALSNDAKPKLMTPDAF
MTPSASLQQITVSPGSSVSSLTAVTAMSSTSVTDASMSRPSEDLTVSPKMQLDTSLTLSS
SSSSLQTSPRSHSVLIPGLPDKLTPKAPVPVTPGNSSLALELQEVEPLVVPQASPTRERS
PDVISSASTAMSQDIPEIASETLQRSFAAAPSGLPAEVLEPNHHADSMASAASALHLLSP
RNRHNSEHSHHSLDMPPVEVDRLNAPSLLETALTQENACSDSVVGQPWPAAPDITRETRN
SMADSPRDEVEEKHKSSSYHRHSYHLLQHDSQDASAEQSDHDDEVASLASTSGGFGAKAS
TQRLPVKDWKAKASPRASPKLKRKGKKDDGDVNQSPRSSNNQVTPEFQDELMCILRSQQR
ELSELRQNQMELLQRLTDHLDAIQSSLMGHVERVIDSQQEQEQRRLDRALTEGQQRNGQL
QEHLSQQLSQSLSTAVCNRLERTVREEMKKTVPQCISKSIDPVASQLSNTIATKLTAVEG
TLKESITKLVKSKNLTDSIVRATADTLQGTIQSAYREAFQSVVLPAFEKSCQSMFQQIND
TFKQGTQEYIQQLETHMKNKKAREQEARDPLLNQLRQLISTFQSTTEQLASTVTASIHAE
VQHQLHIIVGNLQESILAQVQRVIKGEVSLAMKEQQAAVTSSIVQAMRSAAGTPIPSTHL
DFQSQQTHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDTQQVFGQHPCPLSQPVLL
SLIQQLSSDLGTRTELKLNYLEEAVMHLDHSDPITRDHMGSVMNQVRQKLLQFLQVEPHN
TLSKPARRLMIMLQGLVTPGMT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctccaacagcatcgacatcgaggacgcgacccagcacctgcgggacatcctc
aagctggaccggccgggaggttcagtaaacgagaaccagagaccatcaaattcctacaat
ggagacctgaacggactgctggtgcctgatcccatcgtggccagcgatggaccttctttg
gcgaaaccggtgcatcgcaacgtttctctgggagccttacaggagaagcaagtcatctgc
ctttctggtgatgacagctccacttgcacagtaatatcagcaaaagatgtggagatagtg
gccagcagtgattccagcatcacaagtaaggcccgaggaagtaacaaggtgaaaatacag
cctgttgctagatacgactgggagcagaaatactactacggcaatctgatagctgtttca
aactcttacctggcttatgcccttagagctgccagtaatggctccgccatggtgcgagtg
ttgagcatcagcactgctgagaggaccttgttgaagggattcacgggtggcgtggcagac
ctggcttttgctcatctcaactccaaccagctggcgtgcctggatgaggctggcaacctt
tttgtctggcgcctgtccatggataaagacaaaatccaagaggagatcttggtgaacatc
aagcggcctgacaataccccactgaacacctctcggagaatcatctggtgtcctttcatc
ccagatgataatgaagagaatggtgaagagggaagtcaaacgttggcattgctgcatgaa
gacagggcagaggtatgggatttggacattatccgaacaaacaacagctcctggccagtg
gaagtgcctaacatcaaagaaggcttcatcgtagtgaaaggccacagcacgtacctgagc
gagggagcgctttctccagatggaactgtgttggccacagcaagtcatgatggctttgtc
aaattctggcagatctatattgaggtgcaagatgagccaaggtgtcttcatgagtggaaa
ccacatgatggtaggcctctttcctgcctgctcttctgtgacaaccataaaaaacaagac
ccagaggttcctttctggagatttctcatcacaggagcagatcagaatagagaactgaag
atgtggtgcactgtgtcttggacgtgtctgcagactatctgcttttcacctgacatcttc
agctccatgagtattcttcccagcctgaaagtctgcctggacctctccgctgagtatctg
atactgagtgatgtgcagagaaaagtcttgtatgtgatggagctgatgcagaaccaagag
gaaggcaaagcttacttcagctccatctcagagttcctcctcacccacccagtcctgagc
tttggcatccaggcagtgagccgctgccggttaaggcacactgaagtgctcccagcagaa
gaggaaaatgacaacttgagtgtggaaggtgctcagggagcaggggctgttgagtcagcg
gcaggcgtgctgataaaactcttctgtgtgcacactaaggccctacaggatgtgcagatt
agattccagcctctccatagtcctgatatgggtgcatctgtgccttcccatggctctcat
gaagaatttgcctttccagaccacatagctgatctaggcacagaagggctgggatctgaa
aaaggatctgttcatggctctcaaccagacttgcgacgtattgctgacctgcctgtacca
gcagacttccttgctctctcaaatgatgccaaaccaaagttgatgactccagatgcattc
atgacaccgagtgcatctcttcaacagatcaccgtatctccaggcagcagcgtcagttcc
ctgactgcagtcacagccatgagtagcacttctgtcactgatgcctctatgtccaggcca
tcagaagacttgactgtgagccccaagatgcagctggacaccagcctcacactgagcagc
agtagcagcagtcttcagaccagtcctaggagccattcagttcttatcccgggtctccct
gacaagctaacaccaaaggcacctgttccagtcacaccaggaaattcttctctagcactg
gaactgcaggaagtggagcccttggtggtgccccaggcttctcccacccgtgagcgttcg
ccagatgtcatttcctcggcttccacagccatgtcccaagatatcccagagattgcttcc
gagaccttgcaacgcagcttcgcagctgctccatctgggctccctgcggaggtgctggag
cccaaccatcatgcagacagtatggcatctgctgcctcagccttacatttgctgtctccg
aggaaccggcacaattctgagcatagccaccactccttggacatgcctccagtggaggta
gacagactgaatgctccgtcgttactggagactgctttaactcaggaaaatgcatgttct
gacagcgttgtgggtcagccatggccagcagctcctgacataaccagagaaactaggaac
agcatggcagacagcccaagggatgaagttgaagaaaagcacaagagctcttcctatcat
cgacacagctaccacctgctgcagcatgacagccaggatgctagtgcagaacaaagtgac
catgatgatgaagttgcaagtttggcttctacgtcaggtggatttggtgccaaagcgtct
acgcagaggctgcctgtgaaggactggaaagccaaggcatcccctcgggcttccccaaag
ctaaagcggaagggcaagaaagatgacggggatgtgaaccagtcaccaagatcatctaac
aaccaggtgacaccagagttccaggatgagctgatgtgtatattgaggagccaacagcgg
gagctctctgagctgcgtcagaaccagatggagctgctgcagagactcactgatcacctt
gatgccattcagagctccctcatgggccatgtggagagggtgattgactctcagcaggag
caggagcagagaagactggaccgagcactgacggaaggacagcagcgcaatgggcagctc
caggagcatctatctcagcagctctctcagtccctttccactgctgtgtgtaaccgtctg
gagaggaccgttcgtgaggagatgaagaagacagtaccccagtgcatttccaagagcata
gaccctgttgctagccagctgagcaacactattgccaccaagctcacggctgttgaaggg
acactgaaggagagcatcaccaagctagtgaaatcaaagaaccttacagatagcattgtg
agggcaacggctgataccctgcaggggacaatccagtcagcctacagggaagcgttccag
agtgtggtgttaccagcctttgagaagagctgccagtccatgttccagcagatcaatgat
accttcaagcagggcacccaggaatacatccagcagcttgagactcacatgaagaacaag
aaggcgcgagaacaggaggcccgggacccgttgctgaatcagcttcgacagctcatcagc
accttccagagtaccaccgagcagctggcttccactgtcacagccagcatacacgctgag
gtgcagcatcagctgcatattatcgtgggcaacctgcaggagtctattttggcccaggtg
cagagagtcattaaaggagaagtaagcctggctatgaaggagcagcaagcagcagtgacc
tcaagcattgtccaggcaatgcgctcagcagcagggactccgatcccctctactcacttg
gacttccagtctcagcaaactcacatcctgcagcttctccagcaggggcacctcaaccaa
gctttccagcaggctctaacagcagctgatctcaatctggtcctgtatgtttgtgagaca
gtggatactcagcaagtatttgggcagcacccatgcccgctgtcccagcctgtgctgctc
tctctcattcagcagctctcctcggatttgggtactcgtacggaactgaagctgaattac
ctggaggaagcggtgatgcacctggaccacagcgaccccatcacccgagaccacatgggg
tcagtcatgaaccaggtgcggcagaagctcttacagttcctgcaggtggaaccccacaac
acgctgagcaagcctgcccgccgcctcatgatcatgcttcagggcctggtcactcctggc
atgacctag
DBGET
integrated database retrieval system
