Anas platyrhynchos (mallard): 101801146
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Entry
101801146 CDS
T02816
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
apla03016
]
101801146 (TRUB1)
Enzymes [BR:
apla01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
101801146 (TRUB1)
Transfer RNA biogenesis [BR:
apla03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
101801146 (TRUB1)
Prokaryotic type
101801146 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
DMA
Motif
Other DBs
NCBI-GeneID:
101801146
NCBI-ProteinID:
XP_005022035
Ensembl:
ENSAPLG00000006808
LinkDB
All DBs
Position
6:29395199..29424706
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AA seq
288 aa
AA seq
DB search
MAGREAGGGGVAARAAQKLFSLSGLFAVYKPKGPTSAAVLNLLKEKLLAEAGVQTNGNKR
KSQVLKIGHGGTLDSAATGVLVVGIGKGTKLLKTILAGSKKYTAIGLLGKATDTLDATGK
VTEEKPYDQVTKRDLENVLQKFTGDIMQVPPLYSALKKDGERLSTLVKRGEAVEAKPARP
VRVYSLSLQQFQPPLFTLDVECGGGFYVRSLVSDIGKELSTCASMQELTRTKHGPFTLEE
HALHEDKWTIDEIARSLEHCMSLLPGEPSHKKFKTEHPEETAVSCEDK
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggccggcagggaggcgggtggcggcggcgtggcggccagggcggcccaaaagcttttc
tccctcagcgggctcttcgccgtctacaagcccaagggacccacctcggcagccgtgctc
aacctcctgaaggagaagctgctggcagaagctggtgtgcaaacgaatggtaacaaaaga
aaaagtcaggtcttgaaaattggacacggtggaactttggacagtgcagcgacaggagtt
ctggtggttggcattggaaagggaacaaaactgctgaaaactatattggctggttccaag
aagtacactgccattggactgctgggcaaagccactgatacgttggatgctacaggaaaa
gtaactgaagaaaaaccttatgaccaggtaacaaaaagagatcttgaaaatgtgctgcag
aagttcacaggggacatcatgcaagttcctccgctctattctgctttgaagaaggatgga
gaaaggctatcaactctggtgaagagaggagaagcagttgaagcaaagccagctcggcca
gtaagagtgtacagcctctctctccaacagtttcagccaccactgttcacactggatgtt
gaatgcggcggtggcttttatgtcaggagcctggtcagcgacattggcaaagaactctct
acctgtgccagcatgcaggagctgacccgaaccaaacacgggccatttacgctagaggag
catgcacttcatgaagacaaatggacaattgatgaaattgcgcgatccttagagcattgc
atgtctcttctcccaggagaaccatctcataaaaaatttaagacagagcatcctgaagaa
actgctgtgagctgtgaagataagtaa
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