Anas platyrhynchos (mallard): 101801441
Help
Entry
101801441 CDS
T02816
Symbol
LIMCH1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
apla04990
]
101801441 (LIMCH1)
Domain-containing proteins not elsewhere classified [BR:
apla04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
101801441 (LIMCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
101801441
NCBI-ProteinID:
XP_027312984
LinkDB
All DBs
Position
4:complement(51744830..51915038)
Genome browser
AA seq
1742 aa
AA seq
DB search
MASPGLELAAEGQPQPEPAFGEAQKWIEQVTGRSFGEKDFRSGLENGILLCELLNAIKPG
LIKKINRLPTPIAGLDNIILFLRGCKELGLKESQLFDPGDLQDTSNRVTVKNIDCSRKLK
NVLVTIYWLGKAANSCTSYSGSTLNLKEFEGLLAQMRKETEDIESPKRSIRDSGYIDCWD
SERSDSLSPPRHGRDDSFDSLDSFGSRSQQTPSPDVVLRGSSDEGLFSPSSLGRGSDSET
DLPHRKMPDVKKDDMLARRTSHGEPKSAVPFNQYLPNKSNQTFYVPAPLRKKKAEREEYR
KSWSTATSPLGDRPFSKPETIEEEQNETSELCEKEKMGSVAPEESPIKHQVGFSQREGNS
IEQSLSCSAKETSAPEGEDAEEIRKLRRLEQAGIKVMSAAQRYGSKMQAYEDNGSTPDII
LRKENPFMTRYQRKDSGSEDETANRVPDLEKDDFATRRARMNQPKHIVPFNSFIIGPYTN
KDKGKLEDSKKPLQVEKQEHARGSQVHVAAARQLVTHKENTLLKTEKSKSEEEEEVKVPD
TERDDLAKRKSQNVLPQPQEDTVFVNASITKADLETWKRLKLSGEPSEEDLKCPSDTLLP
AEVTVKAAARDDFAVRKARANKKAGGPKQKFVHFGPVTEIDQQKWDRLSIGRASRRGEAE
EASSKDSVEIPSGVESSPSAAGRLRSDAASKPQNEPSEAAQSGTDECHRRTLSPAPATSI
GSEKQALGGSNKQQESAEEECDEHLPDIERDDMLVRRLGTFQRRTTSPIHMYCPPLPVTP
HLLQQRPGEAVAREKDLKTPREAESTVTQEESQEQLEIPHQQSGGTENKVKFPDPQRDDM
LARRTGAFLKQPGPSVKQFLPMPFSKQQTKQGTAREPEKKTVRPEKCAQVCSTSSGKPVM
LPQQEQQGQERCDLPPAGQDDTICTAQVGEHSLNEVHPDQTSKLQDVPEENKNETLSAKD
EHLQTFGPRTAVSDDAESVSMFDMRCEEEAVSQPHSKARHEKLQNIHNQLKEDETRWQDD
LARWKSRRRSASQDLIKKEAERKKMERLLSGDGSNERRKSIKTYREIVEEKERRERELHE
AYKNAKSQEEAESILQQYIERFTISEAVLERLQMPKILERSHSVEPDSPLKDPNPLRYLR
QQSLPAPKFTATIEATIVPTAELEPSGSTGRTSPSKSVVSKAVPMLTPKPYSQPKNTQEV
LKNFKVDGKVSVNGENFNGVEEKDKECTTVIFTQSPSRSLKFDGVARGDRPPVELKKDPT
SVELSLQRPATQSVHKEPTASPGEVDPAASQQTEGSPGGAGPGSPLGASPGSDQKQFKST
AACASPVVKSLEFPPSPVPSKDVAPSEKDVKKPEMEQQKEIVLRATQEVIKPKALEQEGS
IVLPFLKKLPETSQVTLQNSDRQADSDSGDKSNRFNFWSWDPEEERKRQERWQHEQERLL
QEKYQKEQDKLKEEWEKAQREVEEEERRYYEEERKIIEDTVVPFIVSSNSADLLSSSSST
TEGNKTENTTDSNSSPEEGKQNEVTRQKKLLWEQDSIPPLKSKENERWQEKRSGNKVLSG
HPETGILKGGEQEHQVSMMERSSPARLNLPLTQDVSWNQQLLTKQSPHCSEDIRQRSFLG
QSVGQKPNSTGEGRRAGCHENFRSGPLSPCSPAAPSQSPNRYKRSVSGKKLCSTCGLPLG
KGAAMIIETLGLYFHIQCFRCGICKGQLGDAASGTDVRIRNGLLNCNDCYIRSRTAGQPT
TL
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggccagccccgggctggagctggcggcagagggtcagccccagcccgagccggccttc
ggcgaggcgcagaagtggatcgagcaagtgacaggcagaagttttggtgagaaagacttc
cgttctgggttagaaaacggcattcttctgtgtgagttgctgaatgcaataaagccggga
ttgataaaaaagatcaacagactaccgacccccattgcaggtttggacaacatcatctta
ttcttaagaggctgcaaagagctgggacttaaagaatctcagctgtttgatcctggtgac
ctgcaggacacatcgaacagagtgactgtcaagaacattgactgtagtaggaagctgaaa
aatgtattagtcaccatttattggctagggaaagcggcaaacagctgcacgtcatatagt
ggatcaaccctgaacctgaaggagtttgaaggtttgctggcacaaatgagaaaggaaaca
gaggatattgagagtccaaagcgcagcattcgtgacagcggttatatagactgctgggac
tccgagcgcagcgattccctctccccaccgcgccacggcagagatgattccttcgacagc
ctggactcctttggctcccgctcgcagcagacaccgtctccagatgtagtgctcagagga
agcagtgatgaaggacttttttctccttcctcactagggagaggaagtgactcagaaact
gacctgccacacagaaagatgccagatgtgaaaaaagatgatatgttggcaaggcggacc
tcacacggtgaacctaaatcagctgtgccttttaaccagtacctcccgaacaagagtaat
cagactttctatgtacctgctccccttcggaaaaagaaagccgagcgagaagagtatcgg
aagagctggagcaccgcgacttcaccgctaggagacagacctttcagcaaacctgaaacc
atagaagaagaacagaatgaaacgtcagaactgtgtgaaaaggagaaaatgggctccgtg
gctcctgaggaaagccctattaaacatcaagtaggtttcagtcaaagagaaggaaactcc
atagaacagtctctttcatgtagtgcaaaagaaacatcagcacctgagggggaagatgca
gaagagatcagaaagttacgaagactggaacaagctggcattaaggtcatgtcagcagcc
cagcgctatggcagtaaaatgcaagcatatgaagacaatggaagcaccccagacatcatc
cttcgcaaggagaaccccttcatgacacgttaccaaaggaaggattctggttcggaagat
gaaacagcaaatagagtgcctgatttagagaaggatgactttgctacccggagagccaga
atgaatcagcccaaacacatagttccgtttaactcctttataattggaccctacacaaat
aaagataaaggtaaactggaagacagtaaaaagccattgcaggtggaaaagcaggaacat
gcaagaggaagccaggtgcacgtggcagcagcaaggcaactagtgacacacaaggagaac
acacttctgaaaactgagaagagtaagtcagaggaggaggaagaagtgaaagtacctgat
actgagcgagacgatttggctaaacggaaatctcagaatgtccttcctcagcctcaagaa
gatacagtttttgtgaatgcatctataacaaaagcggatttggagacctggaaaagattg
aaactgtcaggggagcccagtgaagaagatctcaaatgtcccagtgacactcttctgcca
gctgaagtcacagtgaaagcagcagcccgtgacgattttgctgtccgcaaagccagagca
aacaaaaaggctggtggccccaagcagaaattcgtgcattttgggccagtaactgagatc
gatcagcagaaatgggacaggctcagcattggcagagcttcccgcaggggtgaagcagaa
gaggcaagcagcaaagacagcgtggagatcccctccggtgttgaaagctctccttcagcc
gctggcaggctccgttccgatgcagcatccaagccacagaacgagcccagtgaggcagcg
cagtcaggtacagatgaatgtcacaggagaacgctgtcacccgcccctgccacttccatc
ggctctgagaagcaagccctgggcggttcaaacaaacagcaagaaagcgccgaggaagaa
tgcgatgagcatttgccagacattgagagagatgatatgttggttaggaggttggggacc
tttcagaggcgtaccacgagccccattcatatgtattgtcctcccctgccagtaactcct
cacctgctgcagcagcggccaggggaggcagtagctcgtgagaaggatttgaagactcca
cgggaagcagaaagcactgtaacacaagaagagagccaagaacagcttgaaatccctcat
cagcagagtggtggaacagaaaacaaagtgaaatttccagacccgcaaagagatgacatg
ttggccagaagaactggagcttttctcaaacagccggggccaagtgttaaacagttcctt
cccatgccattttcaaagcagcagactaagcagggcacagctagagaacctgaaaagaaa
actgtgaggcctgaaaaatgtgcgcaagtctgcagtactagctctggaaaacctgtaatg
ctacctcaacaagagcagcaagggcaggaaagatgcgatctccctcctgctggacaagac
gatactatttgtactgcccaagtgggtgaacatagccttaatgaagtccaccctgatcaa
acgtctaagcttcaggatgttcctgaggaaaacaaaaatgaaacattgtcagccaaggat
gagcatctgcaaacattcggccccagaactgctgtgtctgatgacgcagagagcgtgagc
atgttcgacatgagatgtgaagaagaagctgtgtctcagcctcacagcaaagctcgccat
gaaaaactgcagaacatacacaaccagctgaaagaggacgagaccagatggcaagatgac
ctggctcggtggaagagtcgtcgaaggagtgcttcccaggatttaataaaaaaagaagct
gagagaaagaaaatggaaaggttattgtctggagatggatcaaatgagcgcagaaaaagc
atcaaaacctaccgagaaattgtggaagagaaagagagaagagagcgggagcttcatgag
gcgtacaagaacgcaaagtcccaggaggaggctgagagcatcctccagcagtacatcgaa
aggttcaccattagcgaagctgtcctcgagcgtctgcagatgccaaaaatcctggaaaga
agtcattcagtggagccagattccccactgaaagacccgaatcctctgagatacttaagg
caacagtcgctgcctgctccaaaattcactgccaccattgaagcaaccattgtgcccacc
gctgagttagagcccagcggttcgacgggccgcacatctcccagcaaaagtgttgtctcc
aaggctgtgcctatgctgacacccaagccttactctcagcccaaaaatacacaggaagtt
ttaaagaactttaaggtagatggaaaagtcagcgtgaatggagagaatttcaacggagtt
gaagaaaaggataaagagtgtacaacagtaatatttactcaatcgccaagcagatctctg
aaatttgatggagtagccagaggggacaggcccccggtagagttgaagaaggaccccaca
agtgttgagctcagtttacagaggcctgccactcagagtgtgcacaaagagccaacagcc
tccccaggggaagtggatccggcagccagccagcagaccgagggcagccccggcggagca
ggaccagggagccctttgggcgcatccccaggttcagatcaaaagcaattcaagtcaact
gcagcttgtgccagccctgttgtgaagagcttagagtttcctccaagtcctgtcccttcc
aaggatgttgctccaagtgagaaagatgtgaagaaacctgaaatggagcagcagaaggaa
atagtgctccgtgctacgcaggaggtaataaaaccgaaggccctggaacaagaagggagt
atagtattgccatttttaaagaagctgcctgagaccagccaggtcactctgcagaattct
gatcgacaagctgattctgatagtggtgacaaatcaaaccgcttcaatttctggtcctgg
gatccagaagaagagcggaagcgtcaggaaaggtggcagcatgagcaagaacgcttgctt
caggagaagtatcagaaggaacaagacaagctgaaagaggaatgggaaaaggcacagagg
gaagttgaagaggaggagcgtagatactacgaggaggaacgtaagataattgaggatact
gtagttccattcattgtttcttcaaactctgctgatctcctctcctcttcttcctctacc
actgaaggaaataaaacagagaacacaactgattcaaacagctctccagaggaaggcaaa
caaaatgaagttacaaggcagaaaaaactgctctgggagcaggacagtattccacctctg
aaaagcaaggaaaatgaacgctggcaagaaaagaggagtggaaataaagtgctctcagga
cacccagagacgggtatcttgaaaggaggtgaacaggagcaccaggtgtcaatgatggag
cgcagctcgcctgcccggctgaatctgccgttgactcaggacgtctcatggaaccagcag
ttgctgacgaaacagtccccgcattgctccgaggacattcggcagagatctttcctgggt
cagagtgtgggacagaaaccgaactccacaggggaaggaaggagggcaggctgtcacgag
aacttccgatccgggccattgtctccctgctctcctgctgcgccgagtcagtcacccaac
aggtacaaaaggtccgtcagtggaaagaagctttgttccacctgtgggcttcctcttgga
aagggagctgccatgattattgaaacacttggtctttacttccatattcagtgcttccgg
tgtggcatttgcaagggacagctgggagatgcagcaagtggaacagatgtcaggattaga
aatggtcttcttaactgcaacgattgttacatccgatccagaactgctggacagccaact
acattgtga
DBGET
integrated database retrieval system
