KEGG   Anas platyrhynchos (mallard): 101801443
Entry
101801443         CDS       T02816                                 
Symbol
VCL
Name
(RefSeq) vinculin isoform X1
  KO
K05700  vinculin
Organism
apla  Anas platyrhynchos (mallard)
Pathway
apla04510  Focal adhesion
apla04520  Adherens junction
apla04810  Regulation of actin cytoskeleton
apla04820  Cytoskeleton in muscle cells
apla05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:apla00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    101801443 (VCL)
   04520 Adherens junction
    101801443 (VCL)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    101801443 (VCL)
   04810 Regulation of actin cytoskeleton
    101801443 (VCL)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    101801443 (VCL)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:apla04812]
    101801443 (VCL)
   04147 Exosome [BR:apla04147]
    101801443 (VCL)
Cytoskeleton proteins [BR:apla04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     101801443 (VCL)
Exosome [BR:apla04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   101801443 (VCL)
SSDB
Motif
Pfam: Vinculin Talin_IBS2B VMAP-M0 DASH_Spc34
Other DBs
NCBI-GeneID: 101801443
NCBI-ProteinID: XP_027315588
Ensembl: ENSAPLG00000009928
LinkDB
Position
6:complement(15495810..15558182)
AA seq 1136 aa
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVSAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVRAAQMLQADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKSQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKKDTEAMKRALALIDSKMNQAKGWLRDPNAPPGDAGEQAI
RQILDEAGKAGELCAGKERREILGTCKTLGQMTDQLADLRARGQGATPMAMQKAQQVSQG
LDMLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNAGSEGEEHIRGIMAEARKVA
ELCEEPKERDDILRSLGEISALTAKLSDLRRHGKGDSPEARALAKQIATALQNLQSKTNR
AVANTRPVKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGRRLANVMMGPYRQ
DLLAKCDRVDQLAAQLADLAARGEGESPQARAIAAQLQDSLKDLKARMQEAMTQEVSDVF
SDTTTPIKLLAVAATAPSDTPNREEVFDERAANFENHAARLGATAEKAAAVGTANKTTVE
GIQATVKSARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDT
KSLLDASEEAIKKDLDKCKVAMANMQPQMLVAGATSIARRANRILLVAKREVENSEDPKF
REAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQE
PDFPPPPPDLEQLHLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEAINQPMM
MAARQLHDEARKWSSKPVTVVNEAAEAGVDIDEEDDADVEFTLPSDIEDDYEPELLLMPT
NQPVNQPILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQC
AKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTN
ISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq 3411 nt   +upstreamnt  +downstreamnt
atgcccgtgttccacacgcgcaccatcgagagcatcctggagccggtggcccagcagatc
tcccacctggtcatcatgcacgaggagggcgaggtggacggcaaggccatcccggacctc
accgcccccgtctcggccgtgcaggccgctgtcagcaacctggtgcgggttggaaaagag
acagttcagacaacagaagaccagatcttgaaaagggatatgccaccagcattcatcaaa
gtggagaatgcctgcaccaaacttgtccgggcagcccagatgctgcaagcagatccttat
tcggtaccagctcgtgactatctgattgatggatcaagaggtatcctttctggaacatca
gacttgcttctgacatttgatgaagcagaggtccgtaaaatcatccgtgtctgcaaagga
atattggaatatctgactgtggcggaagtagtagagactatggaggatttggtgacatac
acaaagaatctagggccaggaatgacaaagatggcgaaaatgattgatgaaagacaacag
gagttaactcatcaggaacatagagttatgctggtaaactccatgaatactgtgaaggag
ctattgccagtacttatttcagctatgaaaatttttgtaaccacgaaaaactctaaaagc
cagggaatagaagaggccttgaaaaatcgcaatttcacagtagagaaaatgagtgctgag
ataaatgaaataatccgtgtattacaactcacttcctgggatgaagatgcctgggccagc
aagaaggacactgaagccatgaaaagagctttagccttaatagattcaaagatgaaccag
gcaaaaggttggctgagagatccaaatgcacctccaggggatgctggtgaacaagcaata
agacagatccttgatgaagctggaaaagcaggagaactgtgtgcaggcaaagaacgcaga
gagattctggggacatgcaaaactctgggccagatgactgatcaactagctgatctccga
gctagaggacagggtgctacgccaatggctatgcagaaagcgcagcaggtgtcgcaaggc
ctggatatgctcactgcaaaagtggagaatgcagcccggaaattggaggccatgacaaac
tctaagcaggctattgctaagaagattgatgctgctcagaattggcttgcagatcctaat
gcgggcagtgaaggagaggaacatattcggggaattatggctgaagcaaggaaagttgca
gaactatgcgaggagcctaaagaaagagatgatatccttcgttccttgggagagatctcc
gctttgacagctaagctgtctgatctgcgacgacatgggaaaggtgactctcctgaggcc
cgtgcactggctaagcaaatagctacagcacttcagaatttacagtccaaaacaaacaga
gctgtagcaaatactaggccagttaaagcagctgtccatttggagggcaagattgagcaa
gctcaaaggtggatagacaatcctacagttgatgatcggggagtaggccaggcagcaatt
cggggtctggtcgcagaaggtcgtcgtttagccaatgtcatgatgggaccttatcgtcaa
gacctgcttgccaaatgtgaccgtgtagaccagctggctgctcaacttgctgacctcgca
gcgagaggggagggagagtctcctcaggctagggcaattgctgctcagcttcaggactcg
ctgaaggatcttaaggcacggatgcaagaagcaatgacccaggaggtttctgatgttttt
agtgacactacaactcctattaagttgttggcagtagcagccactgctccttctgatact
cccaatagagaagaggtgtttgatgaaagagcagcaaattttgaaaaccatgctgctaga
ctgggagcaacagcagaaaaagcagctgcagttggaactgctaataaaaccactgtggaa
ggcattcaggcaacagtgaaatcagcaagggaacttaccccacaggtagtatcagctgct
cgaattcttttgagaaatcctggaaaccaagctgcttatgaacattttgagacaatgaaa
aaccaatggattgataatgtagaaaaaatgacagggttggtggatgaagccattgatacc
aagtctctgttggatgcatcagaagaggctattaagaaagatcttgacaagtgtaaagtt
gcaatggccaatatgcaaccacagatgctggtagctggcgccaccagcattgctagacga
gcaaaccgcatcctattggtggcaaaacgagaggttgaaaattcagaagaccctaaattc
cgggaggctgttaaagcagcctctgatgagctaagcaaaactatatcaccgatggtaatg
gatgctaaagctgtggcaggaaacatttctgatcctggtttgcagaagagttttttggat
tctggatacagaattcttggagctgtggccaaagtcagagaagcttttcagcctcaggaa
ccagattttccccctcctcctcctgaccttgagcagcttcatctgactgatgagcttgct
cctccaaaaccaccacttccagaaggtgaggttcccccacccagaccaccaccacctgaa
gaaaaggatgaagaattcccagagcagaaagcaggagaagctattaatcagcccatgatg
atggctgctaggcagttgcatgatgaagcacgaaaatggtctagcaagcctgtgactgtg
gttaatgaagcggctgaggctggtgtagatatagatgaggaggatgatgcagatgttgaa
ttcactctcccctctgacattgaagatgattacgagcctgagctgctgttaatgccaacc
aatcagcctgttaaccaacccattctggctgctgctcagtctctacatcgggaagcaacc
aagtggtctagtaagggtaatgacatcattgctgctgctaaacgaatggcgctgctcatg
gcagagatgtcacgcctggtgagaggaggtagtggaaacaagcgtgcccttattcagtgt
gcgaaggatatcgctaaggcctcagatgaagtcactcgactggccaaagaggtggccaag
caatgcaccgacaaacgcattagaacgaacctcttgcaggtctgtgagcgaatcccaacc
atcagtacacaactcaaaattctttccactgtcaaagctaccatgctgggcaggactaat
atcagtgatgaagaatcagaacaggcaactgagatgttggttcataatgcccagaacctc
atgcagtctgtaaaggaaactgtgagagaagctgaagcagcatccattaaaataagaaca
gatgctggattcactcttcgctgggtcagaaagactccgtggtatcagtag

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