Anas platyrhynchos (mallard): 101801966
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Entry
101801966 CDS
T02816
Symbol
LSM5
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5 isoform X1
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03018
RNA degradation
apla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101801966 (LSM5)
09123 Folding, sorting and degradation
03018 RNA degradation
101801966 (LSM5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apla03019
]
101801966 (LSM5)
03041 Spliceosome [BR:
apla03041
]
101801966 (LSM5)
Messenger RNA biogenesis [BR:
apla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101801966 (LSM5)
mRNA degradation factors
5'-3' decay
Lsm complex
101801966 (LSM5)
Spliceosome [BR:
apla03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
101801966 (LSM5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM14
Motif
Other DBs
NCBI-GeneID:
101801966
NCBI-ProteinID:
XP_027307201
LinkDB
All DBs
Position
2:102482786..102488284
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AA seq
91 aa
AA seq
DB search
MAANATTNPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEIT
PEGRRITKLDQILLNGNNITMLVPGGEGPEV
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaacgccaccaccaacccgtcgcagctcctgccgctcgaacttgtggataaa
tgtataggctctcgcattcacatcgtgatgaagagtgataaagaaatcgttggaacgctt
ctaggatttgatgattttgtcaatatggtgttagaagatgttacagaatttgagattaca
cctgagggcagaagaatcacaaaactagaccagattttgctaaatggaaataacataaca
atgctggttcctggaggagaaggacctgaagtataa
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