Anas platyrhynchos (mallard): 101802344
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Entry
101802344 CDS
T02816
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101802344 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apla03041
]
101802344 (DDX46)
Enzymes [BR:
apla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101802344 (DDX46)
Spliceosome [BR:
apla03041
]
Complex A
U2 snRNP components
U2 related factors
101802344 (DDX46)
Complex B
101802344 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
101802344
NCBI-ProteinID:
XP_027323961
Ensembl:
ENSAPLG00000013208
LinkDB
All DBs
Position
14:3076191..3099448
Genome browser
AA seq
1045 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRGKRGEDRRSRSRDRERRRERSRSRDKRRS
RSRDRKRQRRSRSRERERSRERRRSRSRERRRSRSRSRGRRSRSPSPSKNRKTENRSRSK
EKTEGVEVSKEKKKEKEDKEEEKDKDATASTVATENFDQNKLEEEMRKRKERVEKWREEQ
RKKAMENIGELKKEIEEMKQGKKWSLEDDDDDEEETAEGEKEGNEVEDEELDPLDAYMEE
VKEEVKKFNMRSVKGGGGSEKKTGPTVTKVVTVVTTKKAAVETEKKKGELMENDQDAMEY
SSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTQEEVNVYR
LEMEGITVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQSQAIPAIMNGRDLIG
IAKTGSGKTIAFLLPMFRHIMDQRALEEGEGPIAVIMTPTRELALQITKECKKFSKTLGL
RVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRM
FDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVE
QHVIVIEEENKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCLSLHGGID
QYDRDSIINDFKNGTCKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAG
NKGFAYTFITEDQARYAGDIIKALELSGNPIPTDLEKLWADFKDQQKAEGKLIKKSSGFS
GKGFKFDETEQALANERKKLQKAALGLQDSDDEDTAVDIDEQIESMFNSKKRVKDMGTPG
SSNAPTPSAGNAEKLEIAKRLALRINAQKNLGAEAQVFVPFHFKDVMQQATNAILRGGTI
QAPTVSAKTIAEQLAEKINAKLNYVPIEKQEEEKQDGGQNESFKRYEEELEINDFPQTAR
WKVTSKEALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEIT
RLIKEELIRLQNSYQPTNKGRYKVL
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcgagtccaggcattatcggaagcgctccgcgtcacggggacgctctggcagc
cggtctcgaagtcgttctccctctgacaaaaggggaaaacgtggtgaagacagacgctct
aggagcagagatcgggagcgcagacgtgagaggtcacgcagcagggacaagagaagatct
cgatcgcgtgacaggaagcgtcaaagacgttcgagaagtagagagagggaacgaagtcgg
gagagaagaagatcccgcagccgagagcgaaggcgctctagaagcagaagtagaggtaga
cggtctcgatcccccagcccaagcaagaacaggaaaacagaaaacagatcaagatctaaa
gaaaagacagaaggtgtggaagtttccaaagaaaagaagaaagagaaagaagacaaagaa
gaagagaaggataaagatgctactgcatctactgtggccactgagaattttgatcagaac
aaactggaagaagaaatgagaaaacgaaaagaaagagtggagaaatggagggaagaacaa
cgcaaaaaggctatggaaaacattggagaactgaaaaaagaaattgaagagatgaaacag
ggaaagaaatggagtttggaagatgatgatgatgatgaagaggaaaccgcagaaggagaa
aaagaaggcaatgaggttgaagatgaagagttagatcctttggatgcttatatggaagaa
gtaaaagaagaagtcaagaaattcaatatgagaagtgtgaaaggtggaggtggaagtgaa
aagaaaactggaccaactgttaccaaagtagtaaccgtggtgacaaccaaaaaggcagct
gtagagacagaaaagaaaaaaggggagctcatggagaatgaccaagatgcaatggagtat
tcctcagaagaggaggaagttgatcttcagactgccctaactggctatcagaccaagcag
agaaagcttctagaaccagtggatcatggaaagatagaatatgagcccttcaggaaaaac
ttctatgttgaagtacctgaacttgctaaaatgactcaagaagaggtgaatgtgtaccga
ctggagatggagggaataacagtcaagggaaaaggctgccccaaaccaataaaaacctgg
gtacagtgtggtatttccatgaaaattctcactgctctcaaaaagcacggctatgaaaag
cccacgcccattcagagccaggctatcccagcgattatgaatggtcgcgacttgattggc
attgccaaaacaggaagtggaaaaacaattgcatttctgctgcccatgttcaggcatatt
atggatcagagagctttagaagaaggagaaggtcccatagctgtcatcatgacacctact
cgtgagttggctttgcagattaccaaggagtgtaagaagttctcaaagacccttggactt
cgagttgtctgtgtttatggaggaacaggaatcagtgaacagatagctgaactcaaaaga
ggtgctgaaattattgtttgcacacctggacgtatgattgacatgttagcagctaacaat
ggtcgggtgacaaatctccgcagagtcacgtacgttgtccttgatgaagcagacagaatg
tttgacatgggttttgagcctcaggttatgcgcattgtagacaacgtcaggcctgaccgt
cagactgtcatgttctctgctacttttcccagagccatggaggcattagctcggagaatc
ctaagtaaacctatagaagtgcaggttggaggcagaagcgttgtctgttctgatgtggag
cagcatgttattgtcatagaagaggagaacaagtttttaaagttattagagttactggga
cactatcaggagaaaggatctgttatcatatttgtagacaaacaagaacatgctgatggg
ttgttaaaagatttaatgagagcttcttatccctgcttgtctcttcatggaggtattgat
cagtacgacagggacagcataattaatgatttcaagaatggaacttgcaaacttctagtg
gccacatctgtagcagcgaggggcttggacgtaaaacagttgatgctggtggtcaattat
agttgtcccaaccattatgaagattatgtgcaccgagcaggccgaactggacgagctggc
aataaaggatttgcatatacgttcattactgaggatcaggcacgatatgctggtgatatc
attaaggctttggaattgtctgggaatccaattcctactgatttggagaagctctgggct
gacttcaaagaccagcagaaggctgagggaaagctgattaaaaaaagcagtggattctct
ggcaaaggttttaaatttgatgaaacagaacaggctttggctaatgaaagaaagaagcta
cagaaagcagctcttggcttgcaagactcagatgatgaagatacagctgttgatattgat
gaacaaattgaaagcatgttcaattcaaagaaaagagtaaaagacatgggcacgccagga
tcatcgaatgctcctacaccatcagctggtaatgcagagaaattggaaattgctaaaaga
ttggctttgagaatcaacgcccagaagaatctcggagcagaggcacaagtatttgtcccc
ttccactttaaggatgtgatgcagcaggcaacaaatgctatcctgagaggaggcacaatt
caagctcctactgtatctgccaagaccattgcagagcaactggctgaaaaaataaatgct
aagctgaattatgtacctatagagaagcaggaggaagagaaacaggatggaggacaaaat
gaatctttcaagagatatgaagaagaattagagatcaatgactttccacagactgccaga
tggaaagttacctccaaagaagcactacagagaatcagtgaatattctgaagctgctatt
acaatcagaggaacttatttccctccaggcaaagaacccaaggaaggagagcgaaagatt
tatttagctatagaaagtgccaatgaactggctgtacagaaagcaaaggcagaaatcaca
cgacttataaaagaggagcttattagattgcaaaattcataccaaccaaccaacaaagga
agatacaaagtgctatga
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