KEGG   Anas platyrhynchos (mallard): 101802532
Entry
101802532         CDS       T02816                                 
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
apla  Anas platyrhynchos (mallard)
Pathway
apla03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:apla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    101802532 (MSH2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:apla03400]
    101802532 (MSH2)
DNA repair and recombination proteins [BR:apla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     101802532 (MSH2)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_II MutS_IV MutS_I AAA_27
Other DBs
NCBI-GeneID: 101802532
NCBI-ProteinID: XP_027309420
Ensembl: ENSAPLG00000015347
LinkDB
Position
3:complement(16906359..16940030)
AA seq 939 aa
MAVEAPREAAAAVWPEGAGAEAGFVRAVLALPEKPDTTVRFFERGDYYTAHGADARLAAR
ELFRTRAVIRQLAGAAGNQKLESVVLSKMNFESFVRDLLLVRHYRVEVYKNKAGSKSVKE
NDWYLAYKGSPGNLAQFEEVLFANNDMSMAIGVVGVKLSTADGQRVVGVGYVDTTLRKLS
VCEFPDNDQFSNLEALLVQLGPKECVLPGGETAGEMGKLRQVVQRGGILITDRKKAEFTT
KDIVQDLNRLLKSKKEEQINSAALPEMEKQVAISSLSAIIKFLELLSDESNFGQFELTTF
DLSQYMVLDNAAVQALNLFQSSVENANTTQSLSGLLNKCRTPQGQRLVNQWIKQPLMDKN
RIEERLNLVEAFVVDPELRQSLQEDLLRRFPDLNRLAKKFQRQAATLQDCYRMYQAINQL
PNVVKALEKHEGTHQMLLLAVFITPLNDIHSDFSKFLEMIETTLDMDKVENHEFLVKASF
DPNLTELREKMNELEENMQSFLQSAAKELGLEAGKSIKLESNSQFGHHFRITCKEEKVLR
NNSKYKITDTQKNGVKFTNSKLSAVNEEYIKNREEYEEAQDAIVKEIINIASGYAEPIQT
MNDVIAHLDAIVSFAHVSNGAPVPYVRPVILEKGQGRIVLKGARHPCIEVQDEVAFIPND
ITFEKGKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSAEITIVDCILARVGA
GDSQLKGVSTFMAEMLETASILRTASENSLIIIDELGRGTSTYDGFGLAWAISEYIASKI
CAFCMFATHFHELTALADQVPTVNNLHVTALTSDDTLTMLYRVKAGVCDQSFGIHVAELA
AFPKHVIESAREKALQLEEFQNIGKSKESEGEPPSKKVYREREEGEKIIQDFLSQVKALP
LTDMSEEDIKIKLKQLRTDVLAKNNSFVNEIISRTKVTS
NT seq 2820 nt   +upstreamnt  +downstreamnt
atggcggtagaggcgccgcgggaggcagcagcggcggtgtggccggagggcgcgggcgcc
gaggcgggcttcgtgcgcgccgtgctggcgctgcccgagaagcccgacaccaccgtgcgc
ttcttcgagcgcggcgactactacacggcgcacggcgcggacgcgcggctggccgccagg
gagctcttccgcacccgcgccgtcatccggcagctggcgggcgccgcggggaatcagaaa
cttgaaagtgttgtgcttagtaaaatgaactttgaatcttttgtaagagatctgctcctg
gttcgtcattacagagttgaagtttacaagaataaagcagggagcaaatctgtcaaagaa
aatgactggtacctagcatacaagggttctccgggaaatcttgcccagtttgaagaagtt
ctctttgccaacaatgatatgtcaatggctattggggttgtgggggtgaagctgtctact
gctgatggacaaagagttgtaggagtagggtatgttgacactacgctgagaaaactgagc
gtctgtgaattcccagataatgatcagttctcaaaccttgaagctctactggttcagctg
ggacctaaggagtgcgtgttgccaggaggagagactgcaggagagatgggaaaactgcga
caagtcgttcagagaggaggaatcctgattacagacagaaagaaggcagaattcacaaca
aaagatattgttcaggatctcaatcgcttgctaaaatcaaaaaaagaagaacaaattaat
agtgcagcgttgccagagatggaaaaacaggtcgctatttcatctttgtcagccattatc
aagtttttagagttgctgtcggatgagtctaattttggacaatttgaactgactactttt
gatcttagtcaatacatggttctagataatgcagctgtccaagccctcaaccttttccag
agttctgttgaaaatgctaatactacacagtccctatccggtttactaaataaatgcaga
acccctcaaggacaaagactggttaatcagtggatcaaacagccacttatggacaagaat
agaattgaagaaaggttgaatttggttgaagcttttgtggtagatccagaactacgtcag
agccttcaagaagatcttttacgtcgcttcccagatctcaaccggctggcaaagaaattt
cagagacaagctgcaaccttacaggactgttatcgaatgtatcaggctattaatcaactg
cctaatgttgtaaaagcactagaaaaacatgaaggaactcaccagatgttgttgttagca
gtgtttataacacctcttaatgatattcactctgacttctcaaagtttctggagatgata
gaaacaacattggatatggataaggtggagaatcatgaatttcttgtcaaggcttctttt
gatcctaacttgacagaattaagagaaaagatgaatgaactggaagaaaacatgcagtcc
ttcttacagagtgcagccaaagaattaggtttggaagctggcaaaagtattaaactagag
tcaaattcacagttcggccatcactttcgaattacttgcaaggaggaaaaagtcctccgg
aacaattcaaaatacaagataactgatacacagaagaatggggtgaagtttactaacagc
aaattgagcgccgtcaatgaagaatacataaagaacagagaagaatatgaagaggctcag
gatgcaattgttaaggaaatcattaatattgcttcaggttatgcagagccaatacagact
atgaatgatgtaatagctcatttagatgcaattgtcagttttgctcatgtgtcaaatgga
gcgccagtgccctatgtccgtcctgtcattttggaaaagggacaaggaaggattgtgctg
aaaggtgccaggcatccttgcattgaagtgcaagatgaagtggccttcatccccaatgac
attacatttgagaagggcaagcagatgttccacattattactggccctaacatgggagga
aaatcaacgtacatccgacagactggggtgattgttcttatggcccagattgggtgcttt
gtaccctgtgactctgcggaaataaccattgtggattgtatcctggctcgggtaggagct
ggagacagtcagctgaaaggcgtgtctactttcatggctgaaatgttggaaactgcttca
atccttaggacagcatctgaaaactccctaataatcattgatgaactgggaagaggaact
tctacctacgatggctttggcttagcatgggctatttcagaatacattgctagcaaaatc
tgtgctttctgtatgtttgctacacattttcatgaactgacagcacttgctgatcaagtg
ccaacagtaaataacctacatgttactgctctaaccagtgatgacacactgacgatgctt
taccgtgtcaaggcaggtgtttgtgaccagagttttggaatacatgtagcagagttggcg
gctttcccaaaacatgtgatagaaagtgcaagagagaaagcactgcaactggaggagttt
caaaacattggcaagtccaaggaatctgaaggagaaccaccatccaagaaagtctacaga
gaaagagaggaaggtgaaaagatcattcaggattttcttagtcaagtgaaagcattgccc
ctgacagatatgtcagaagaagacatcaaaatcaagctgaagcagctgagaactgatgtg
ttggcaaagaacaacagttttgtgaatgaaatcatttcccgaacaaaagttacatcatga

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