Anas platyrhynchos (mallard): 101802532
Help
Entry
101802532 CDS
T02816
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
101802532 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apla03400
]
101802532 (MSH2)
DNA repair and recombination proteins [BR:
apla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
101802532 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
101802532
NCBI-ProteinID:
XP_027309420
Ensembl:
ENSAPLG00000015347
LinkDB
All DBs
Position
3:complement(16906359..16940030)
Genome browser
AA seq
939 aa
AA seq
DB search
MAVEAPREAAAAVWPEGAGAEAGFVRAVLALPEKPDTTVRFFERGDYYTAHGADARLAAR
ELFRTRAVIRQLAGAAGNQKLESVVLSKMNFESFVRDLLLVRHYRVEVYKNKAGSKSVKE
NDWYLAYKGSPGNLAQFEEVLFANNDMSMAIGVVGVKLSTADGQRVVGVGYVDTTLRKLS
VCEFPDNDQFSNLEALLVQLGPKECVLPGGETAGEMGKLRQVVQRGGILITDRKKAEFTT
KDIVQDLNRLLKSKKEEQINSAALPEMEKQVAISSLSAIIKFLELLSDESNFGQFELTTF
DLSQYMVLDNAAVQALNLFQSSVENANTTQSLSGLLNKCRTPQGQRLVNQWIKQPLMDKN
RIEERLNLVEAFVVDPELRQSLQEDLLRRFPDLNRLAKKFQRQAATLQDCYRMYQAINQL
PNVVKALEKHEGTHQMLLLAVFITPLNDIHSDFSKFLEMIETTLDMDKVENHEFLVKASF
DPNLTELREKMNELEENMQSFLQSAAKELGLEAGKSIKLESNSQFGHHFRITCKEEKVLR
NNSKYKITDTQKNGVKFTNSKLSAVNEEYIKNREEYEEAQDAIVKEIINIASGYAEPIQT
MNDVIAHLDAIVSFAHVSNGAPVPYVRPVILEKGQGRIVLKGARHPCIEVQDEVAFIPND
ITFEKGKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSAEITIVDCILARVGA
GDSQLKGVSTFMAEMLETASILRTASENSLIIIDELGRGTSTYDGFGLAWAISEYIASKI
CAFCMFATHFHELTALADQVPTVNNLHVTALTSDDTLTMLYRVKAGVCDQSFGIHVAELA
AFPKHVIESAREKALQLEEFQNIGKSKESEGEPPSKKVYREREEGEKIIQDFLSQVKALP
LTDMSEEDIKIKLKQLRTDVLAKNNSFVNEIISRTKVTS
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagaggcgccgcgggaggcagcagcggcggtgtggccggagggcgcgggcgcc
gaggcgggcttcgtgcgcgccgtgctggcgctgcccgagaagcccgacaccaccgtgcgc
ttcttcgagcgcggcgactactacacggcgcacggcgcggacgcgcggctggccgccagg
gagctcttccgcacccgcgccgtcatccggcagctggcgggcgccgcggggaatcagaaa
cttgaaagtgttgtgcttagtaaaatgaactttgaatcttttgtaagagatctgctcctg
gttcgtcattacagagttgaagtttacaagaataaagcagggagcaaatctgtcaaagaa
aatgactggtacctagcatacaagggttctccgggaaatcttgcccagtttgaagaagtt
ctctttgccaacaatgatatgtcaatggctattggggttgtgggggtgaagctgtctact
gctgatggacaaagagttgtaggagtagggtatgttgacactacgctgagaaaactgagc
gtctgtgaattcccagataatgatcagttctcaaaccttgaagctctactggttcagctg
ggacctaaggagtgcgtgttgccaggaggagagactgcaggagagatgggaaaactgcga
caagtcgttcagagaggaggaatcctgattacagacagaaagaaggcagaattcacaaca
aaagatattgttcaggatctcaatcgcttgctaaaatcaaaaaaagaagaacaaattaat
agtgcagcgttgccagagatggaaaaacaggtcgctatttcatctttgtcagccattatc
aagtttttagagttgctgtcggatgagtctaattttggacaatttgaactgactactttt
gatcttagtcaatacatggttctagataatgcagctgtccaagccctcaaccttttccag
agttctgttgaaaatgctaatactacacagtccctatccggtttactaaataaatgcaga
acccctcaaggacaaagactggttaatcagtggatcaaacagccacttatggacaagaat
agaattgaagaaaggttgaatttggttgaagcttttgtggtagatccagaactacgtcag
agccttcaagaagatcttttacgtcgcttcccagatctcaaccggctggcaaagaaattt
cagagacaagctgcaaccttacaggactgttatcgaatgtatcaggctattaatcaactg
cctaatgttgtaaaagcactagaaaaacatgaaggaactcaccagatgttgttgttagca
gtgtttataacacctcttaatgatattcactctgacttctcaaagtttctggagatgata
gaaacaacattggatatggataaggtggagaatcatgaatttcttgtcaaggcttctttt
gatcctaacttgacagaattaagagaaaagatgaatgaactggaagaaaacatgcagtcc
ttcttacagagtgcagccaaagaattaggtttggaagctggcaaaagtattaaactagag
tcaaattcacagttcggccatcactttcgaattacttgcaaggaggaaaaagtcctccgg
aacaattcaaaatacaagataactgatacacagaagaatggggtgaagtttactaacagc
aaattgagcgccgtcaatgaagaatacataaagaacagagaagaatatgaagaggctcag
gatgcaattgttaaggaaatcattaatattgcttcaggttatgcagagccaatacagact
atgaatgatgtaatagctcatttagatgcaattgtcagttttgctcatgtgtcaaatgga
gcgccagtgccctatgtccgtcctgtcattttggaaaagggacaaggaaggattgtgctg
aaaggtgccaggcatccttgcattgaagtgcaagatgaagtggccttcatccccaatgac
attacatttgagaagggcaagcagatgttccacattattactggccctaacatgggagga
aaatcaacgtacatccgacagactggggtgattgttcttatggcccagattgggtgcttt
gtaccctgtgactctgcggaaataaccattgtggattgtatcctggctcgggtaggagct
ggagacagtcagctgaaaggcgtgtctactttcatggctgaaatgttggaaactgcttca
atccttaggacagcatctgaaaactccctaataatcattgatgaactgggaagaggaact
tctacctacgatggctttggcttagcatgggctatttcagaatacattgctagcaaaatc
tgtgctttctgtatgtttgctacacattttcatgaactgacagcacttgctgatcaagtg
ccaacagtaaataacctacatgttactgctctaaccagtgatgacacactgacgatgctt
taccgtgtcaaggcaggtgtttgtgaccagagttttggaatacatgtagcagagttggcg
gctttcccaaaacatgtgatagaaagtgcaagagagaaagcactgcaactggaggagttt
caaaacattggcaagtccaaggaatctgaaggagaaccaccatccaagaaagtctacaga
gaaagagaggaaggtgaaaagatcattcaggattttcttagtcaagtgaaagcattgccc
ctgacagatatgtcagaagaagacatcaaaatcaagctgaagcagctgagaactgatgtg
ttggcaaagaacaacagttttgtgaatgaaatcatttcccgaacaaaagttacatcatga
DBGET
integrated database retrieval system