Anas platyrhynchos (mallard): 101802732
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Entry
101802732 CDS
T02816
Symbol
PABPC4
Name
(RefSeq) polyadenylate-binding protein 4 isoform X2
KO
K13126
polyadenylate-binding protein
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03015
mRNA surveillance pathway
apla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101802732 (PABPC4)
09123 Folding, sorting and degradation
03018 RNA degradation
101802732 (PABPC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apla03019
]
101802732 (PABPC4)
03041 Spliceosome [BR:
apla03041
]
101802732 (PABPC4)
Messenger RNA biogenesis [BR:
apla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
101802732 (PABPC4)
mRNA cycle factors
Stress granule specific factors
101802732 (PABPC4)
Spliceosome [BR:
apla03041
]
Complex C
Other components
Complex C specific factors
101802732 (PABPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
PABP
RRM_5
RRM_7
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
101802732
NCBI-ProteinID:
XP_027299606
Ensembl:
ENSAPLG00000009729
EnsemblRapid:
ENSAPLG00030021900
LinkDB
All DBs
Position
24:667918..681446
Genome browser
AA seq
632 aa
AA seq
DB search
MNAAAAASSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVN
FQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDT
FSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKE
REAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGFVSF
EKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYI
KNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIV
GSKPLYVALAQRKEERKAHLTNQYMQRIAGMRALPANTIINQFQPAAGGYFMPAVPQAQS
RPTYYAPNQMTQMRPNPRWQQGGRPQGFQGMPNAMRQSGPRPALRHLAPAGNAPASRGLP
AAAQRVGVATAAQNLAPRPPVAAPTPRAVPPYKYASSVRSPHPAVQPLQAPQPAVHVQGQ
EPLTASMLAAAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPES
LRSKVEEAVAVLQAHQAKKEAAQKVGVVAATS
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcggcggcggcggccagcagctaccccatggcatcgctctacgtgggcgacctg
caccccgatgtcaccgaggccatgctctacgagaagttcagccccgccgggcccgtgctc
tccatccgcgtctgcagggacatgatcacccgccgctccctcgggtacgcctacgtcaac
ttccagcagcctgccgacgctgagcgtgctctagacaccatgaattttgatgtgatcaaa
ggaaaacccattcgcatcatgtggtctcagagggacccctccttgaggaagtcaggggtt
gggaatgtcttcattaagaacctggacaaatccattgataacaaggcactttatgacaca
ttctcagcgtttgggaatattttgtcctgcaaggtggtgtgtgatgagaatggctctaag
ggctacgcatttgtgcactttgagacccaggatgctgcagatagagccatcgagaagatg
aacggcatgctgctcaacgaccgcaaagtatttgttgggagattcaagtctcgtaaagaa
cgggaggctgagctgggagccaaggcaaaggagttcaccaatgtttatattaaaaatttt
ggggatgacatggatgatgaaagactaaaggagctcttcagcaaatacggtaagactctg
agcgttaaagtgatgacagaccccactggaaaatccaaagggtttggctttgtaagcttt
gaaaagcatgaggatgctaacaaggcagtagaagaaatgaatgggaaggatatcaatggg
aaaatggtgtttgtagggcgagcacagaagaaggttgagcgccaggcagagctgaaacgg
aagtttgaacagctaaaacaagagagaatcagccggtaccagggagttaacctgtacatt
aaaaacctagatgacactatagatgatgaaaaactgaggaaggagttctcacctttcgga
tcaataacaagtgccaaggtgatgctggaagatggacggagcaaagggtttggcttcgtc
tgcttttcctctccagaggaagctacaaaagctgtgacagagatgaatggacgaattgtg
ggctcaaagccattgtacgttgcactcgcacaaaggaaggaagagcggaaggcccatcta
actaatcagtacatgcagcgcattgctgggatgagggccttgcctgccaacacaatcatt
aatcagttccagcctgctgctggggggtatttcatgcctgctgtaccccaggcccagagc
agacccacttactatgcacccaaccaaatgacgcagatgagacctaacccacgctggcag
caaggaggacgacctcaaggcttccagggaatgccaaatgccatgcgccagtctggacca
cggccagcactgcgccatctggcccctgctggcaatgccccggcctctcgtggcctccct
gctgctgcccagcgagttggtgttgccactgcagcacagaacttagctcctcgtccacct
gtagctgcccccactcccagagcagttcctccttacaaatacgcctcaagtgtccgcagc
ccgcacccagccgtacagcctttgcaggcacctcagcctgcagtccacgttcagggacag
gagcctctaacagcctccatgctggctgctgcccctcctcaggagcagaaacagatgctg
ggagaacgtttgttccctctgattcaagctatgcaccccagtcttgcagggaagatcaca
ggaatgctgctagagattgacaactcagagctgctgcacatgctggagtctccagagtcc
ctccggtcaaaggtggaggaggctgttgcagtgttgcaggctcaccaagccaagaaagaa
gctgcccagaaggtgggtgtggttgctgctacctcttaa
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