Anas platyrhynchos (mallard): 101802923
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Entry
101802923 CDS
T02816
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101802923 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apla03019
]
101802923 (HBS1L)
Messenger RNA biogenesis [BR:
apla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101802923 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
101802923
NCBI-ProteinID:
XP_027310290
Ensembl:
ENSAPLG00000007791
LinkDB
All DBs
Position
3:59662270..59722899
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AA seq
687 aa
AA seq
DB search
MSRHRNVRGYNYDEDFEDDDVYGQSVEDDYCISPSTAAQFIYSRRDKPATCAEPLEEEYG
YEGTEDAAGYFASNHQLGDVDRARLNSCLDQMREVLAESVPEQTMVQAVLDSKFDVQKAL
DLVLSQGSKQNVKTHNEDAMIVGKTTKGKSRDSQSARMESEIVPKVTKMTVSGKKQSMGF
EVPCMIAEENGHANTPQKGLLNEDASITSGVIEAVSKSALSPQVAQVSEEQNAVPTPVKK
TSKTKPQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQ
ESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMIT
GAAQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQMAVAVNKMDQVNWQQER
FQEITSKLGQFLKQAGFKESDVAYIPTSGLGGENLVTRSQSSDLTKWYTGKCLLEQIDSF
KPPQRSVEKPFRLCVADVFKDQGSGFCVTGKIEAGYIQVGERLLAMPPNETCTAKGITLH
DEPVDWAAAGDHVSLTLTGMDIIKINVGCVFCDPKEPIKVCTRFRARILIFNIEVPITKG
FPVLLHYQTVSEPATIRRLLSVLHKSTGEVTKKKPKFLTKGQNALIELQTQRPVALELYK
DFKELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggcaccgcaacgtccgaggatacaactacgacgaagattttgaagatgatgat
gtgtatggccaatcagtagaagatgactattgcatttctccttcaacagccgctcagttt
atctactcaagacgagacaaaccagcaacatgtgctgagccgttagaagaagaatatggc
tacgaaggtacagaagatgctgctggttattttgcatccaatcatcagttgggtgatgtt
gatagagcccgtcttaattcatgccttgatcaaatgagagaagttttggcagagtctgta
ccagaacaaacaatggtgcaagcagtactggatagtaaatttgatgtacagaaggctttg
gatctcgtgctttcccaaggcagtaagcaaaatgtgaagacccacaatgaggatgctatg
attgtaggaaagacgacaaaaggaaaatcaagggattcccagtcagccagaatggaatct
gaaattgtgccaaaagttaccaaaatgacagtgtctggaaagaaacagtctatgggattt
gaagttccatgcatgattgctgaagaaaatggccatgctaacacacctcaaaaaggactg
ctaaatgaagatgctagcataacttctggggtaattgaggcagtctcaaaatctgctctt
tcaccccaagtagcgcaggtttcagaagagcagaatgccgtgcctactccagtaaaaaag
acgagcaagacaaaaccacaaatagatgtgaaagcagagttggagaagagacaaggagga
aagcaactactaaatttggtggtaataggacatgttgatgcaggtaaaagtactttaatg
ggtcatctactctaccttttgggaaatgtgaacaaaagaactatgcacaaatacgaacag
gaatctaagaaggctggcaaagcttcgtttgcttatgcatgggtcctggatgaaactggg
gaagaaagagaaaggggagtaacaatggatgtgggcatgaccaaatttgagacaaagact
aaagtaattacattgatggatgctccaggccacaaagacttcattccaaatatgatcaca
ggagctgcccaggctgatgtagctattttggttgtggatgccagcagaggagagtttgaa
gctgggtttgagacaggtggacaaactcgagaacatggattattagtgcgttctcttgga
gtgacacagatggctgttgcagtcaataaaatggaccaggtcaattggcagcaagaaaga
tttcaggaaattaccagtaagcttggccaatttcttaaacaagctggctttaaggaatct
gatgtggcttatattccaacgagtggtcttggtggtgaaaatctagtgacaagaagtcag
tcaagtgaccttacgaaatggtatacaggaaagtgtttgttagagcaaattgattctttc
aagccaccacaaagatcagtagagaaaccatttaggttgtgtgttgctgacgtttttaaa
gaccaaggatcaggattttgtgtgactggaaaaatagaagcaggctatattcaagttgga
gaacgacttctggcaatgcctcctaatgaaacttgcactgcaaaaggaatcacactgcat
gatgaaccagttgattgggctgcagcaggagatcacgttagtctcactttgaccggcatg
gatatcatcaaaatcaatgttggctgtgtattttgtgatcccaaggagcccattaaagtt
tgcactcgattcagagctcggattctcatttttaatattgaggttccaatcactaaagga
ttccctgtgcttttacactatcaaaccgtaagtgaacctgctactattagaagattattg
agtgtcctgcacaaaagcactggtgaagtgacaaagaaaaagcctaagttcctgaccaaa
ggccagaatgctttaatagaactacagactcaaaggcctgttgctctagagttgtataaa
gattttaaagagcttgggaggtttatgttacgctacagtggttcaactattgctgcagga
gttgtcacagagattaaagaatga
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