Anas platyrhynchos (mallard): 101803209
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Entry
101803209 CDS
T02816
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla04010
MAPK signaling pathway
apla04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101803209 (CACNA1H)
04020 Calcium signaling pathway
101803209 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
apla04040
]
101803209 (CACNA1H)
Ion channels [BR:
apla04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
101803209 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
Motif
Other DBs
NCBI-GeneID:
101803209
NCBI-ProteinID:
XP_038042871
LinkDB
All DBs
Position
15:complement(15175663..15419789)
Genome browser
AA seq
2489 aa
AA seq
DB search
MSDGESREPRAAGGEVRVPIPVAPRRPSELPPEDAGSGPGGSPGAGGSPGRDPPPELASE
EEEQVPYPALAPTAFFCLKQTTRPRSWCLRLVCNPWFEHVSMLVILLNCVTLGMFQPCED
VECQSERCTILEAFDDFIFAFFAVEMVIKMVALGIFGQKCYLGDTWNRLDFFIVMAGMME
YSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFG
IVGVQLWAGLLRNRCFLDKNLATTYNLTFLHPYYRTDEAEENPFICSSHRENGMQKCSNI
PNRKEYKVECTLSMDSYTPSLYNPDFSSRNACINWNQYYNVCMAGDVNPHNGAINFDNIG
YAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSET
KQRENQLMQEQRARYLSNDSTIASFSEPGSCYEELLKYICHIFRKVKRRTIRLYNNWQSK
RRKKVNPNSTTNGQSRQGKKRITSIHHLIHHHHHHHHHHYHISNGSPRGPRSNPEICDLE
LKVMKPGGKLMLPSSSPNLQSPAPPPDSESVHSIYHADCHVEGPQVNCKSSNAPASIKLT
AGLSNHGSNYPTILPSPTSKGSSVPVPKGKKNGNSPVAVVNSPVNLGTDSYGKLQQLVGE
HGLRRTSSRLSGLSAACPLPSPPGGTLTCELQDCPFCASLLEDPEFAFSESDSCDSDSNG
VYEFTQDLRHGDHRDQLQQQRSRRRRKKKKPKERNKVTRLWKAFGSKLKRIVESKYFNRG
IMIAILINTLSMGIEYHEQPDELTNALEISNIVFTSMFALEMLLKLLAFGLFGYIKNPYN
IFDGIIVVISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATF
CMLLMLFIFIFSILGMHLFGCKFSLKTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNV
VLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSDTDEDKTSANF
DDDFEKLKDLRATEMKMYSLAVTPNGHLEGRGSMPPPIIMRTAATPMPTPKCSPHMDSVH
TFVDSRRGSNASIDPMSYDQKSLSSLRSSPCANWGTSSNWGSRRSSWNSLGRAPSLKKKN
QSGERESLLSGEGKGSTDDDSDDAKSSTVSRPSLHRRAESLDYRSSLDLPELLQLPTMRH
SLSISPMAVLPAEYQDCNGKMVHVPSEFFLRIDGHKEEAMDYEDDMEDSYCYRIRKVLEP
YKPEWCKTHEDWSLYLFSPQNRFRVMCQKVIAHKMFDHVVLVFIFLNCITIALERPDIDP
HSTERVFLSVSNYIFTAIFVAEMMVKVVALGFFSGENTYLQSSWNVLDGVLVFVSIIDII
VSMASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCAF
FIIFGILGVQLFKGKFYYCDGPDVKNITTKTDCTNARYKWVRRKYNFDNLGQALMSLFVL
SSKDGWVNIMYDGLDAVGIDQQPIQNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHK
CRQHQEAEEARRREEKRLRRLEKKRRSKEIYLSEAQRRPYYADYSPARKYIHSLCTSHYL
DLFITFIIGVNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEAVLKLVAFGFRRFFKD
RWNQLDLAIVLLSIVGITLEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATGMRALL
DTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLDCSEENPCEGLSRHATFTNFGMAFL
TLFRVSTGDNWNGIMKDTLRECTREDKHCLSYLPVISPVYFVTFVLIAQFVLVNVVVAVL
MKHLEESNKEAKEDAEMDAEIELEMSRGATTSATTGSRGGGVAPDSRAPYRSQEAVKSES
AVQAKHQTLEALSCENVSLAIPDTLEGAETPVMEIPSSCSVSHHVLTPSHHPPGHEAEVG
TASLRPQDSQNLLTVRKISVSRMHSLPNDSYMFRPVMPAKTPFPLHEVEMETYPCKSQRG
SITSIRSQPVGACSSSLRVPTESLQLAARSPNHDGRHRWKILPPHVVPRSPTLNKLLCRQ
EAVRTDSVDVQTPDPKDSLQAEPGETLPSAKQPQSTFTPSPLHPTASSLPATPPCSPPSS
PHRHPGTLARKHGCGQRGVPSRPGSPSDSPPSPEGCLVEPSDLADEEVRHINSSAKDWGE
NSEAGSRSTSPFISPAPSPVPLKNCSTSSLSGGGGKEKDLKKFYSIDTKGFLNKPSWADD
QRRHSIEICPSVSDGDCSFEDPAEEKQRSPAHIQPESEYIHGARRKKKMSPPCISIDPPM
EDDGGAASRTKPSENSMLRRRTPSCEFPAYRESLELAESQPGGEPASKTERRGQPPCRGE
HLAIPNFSFEQSDGSSLSSLSDLLDSGQSTPDSRPDPAAPELKKAEHLKTQWGSAEKSKE
LLGPAKSPLRKQDLGPVTVATEEDIDEPV
NT seq
7470 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatggcgagagccgagagccgcgggcggccggcggcgaggtgcgggtgcccatc
cccgtggcgccccgccgccccagcgagctgccgccggaggatgccggctccggtcccggc
ggttcccccggtgccggtggttcccccggccgcgacccgccgcccgaactggcctccgag
gaggaggagcaggtgccgtacccggcgctggcacccaccgctttcttctgcctcaagcaa
accacccgcccgcgcagctggtgcctcaggctggtctgtaacccctggttcgagcacgtc
agcatgctggtcatcctcctgaactgcgtcaccctgggcatgttccagccctgcgaggac
gtggagtgccagtcggagcgctgcaccatcctggaggcgtttgacgacttcattttcgct
ttcttcgcggtggagatggtcatcaagatggtggctctggggatcttcgggcagaagtgt
taccttggagacacgtggaatcgcctggacttcttcatcgtgatggcgggcatgatggag
tattccctggacggacacaacgtgagcctgtcggcgatccgcaccgtccgcgtgctccgg
ccgctccgagccattaacagggtcccaagtatgcgaatactggtcaccctgctgttagat
actctgcctatgttaggcaacgtcctcctcttgtgcttctttgtcttcttcatctttggg
atcgtcggtgtgcagctctgggcagggctgctgaggaacaggtgtttcctagacaagaat
ttggcaacgacgtacaacctcaccttcctgcatccgtactaccggacagacgaagcggag
gagaatccgttcatctgctcatcccatcgtgaaaacggcatgcagaaatgctccaacatc
ccaaacaggaaggagtacaaggtggagtgcaccttgagcatggactcctacaccccaagt
ttatacaaccctgacttcagcagcaggaatgcctgcataaactggaaccagtattacaac
gtatgcatggcaggggatgtaaacccacacaatggagctatcaattttgataatattggc
tatgcctggatagctatatttcaggttataaccctggaaggatgggttgacatcatgtat
tatgtgatggatgcacattctttttacaattttatatattttatattacttataatagtt
ggttccttcttcatgattaacttgtgcctggttgtgatagcaacacagttttctgaaaca
aagcagcgggagaaccagctgatgcaggagcagcgggcccgttatctctccaatgacagc
acaatcgccagcttctcggagccaggtagctgctacgaggagctgctcaagtacatctgc
cacatcttcaggaaggtgaaacggcggacgatacgcctgtacaataactggcagagcaag
cgcaggaaaaaagtgaacccaaacagcaccacgaacgggcagagtcgccaaggcaaaaag
cgcatcacctccatccaccacctcatccaccaccaccaccaccaccatcaccaccactac
cacatcagcaacgggagccctcgggggccgcgctccaaccctgagatttgtgacttggaa
ctcaaggtcatgaaacctggaggcaaactgatgcttccttcctcatcacccaacttgcag
agccccgcacctcctccagattcggagtctgtgcacagcatttaccacgcagactgtcac
gttgaaggaccacaggtgaactgtaagtcttccaatgcccctgcaagcattaaactgact
gccggactctccaaccatggcagcaactatcctaccatcctgccttctccaacgagcaaa
ggcagttctgtgccggttcccaaaggaaagaagaacggcaactcacctgtggcggtggtt
aacagccctgtaaatttgggcacggattcttatgggaagctgcagcaactggtaggagag
catggtctgcggcggacatccagccggctgtcggggctgagcgcggcctgcccgctgccc
agcccgccgggggggacgctgacctgcgagctgcaggattgccccttctgcgccagcctc
ctggaggatcccgagttcgccttcagcgagtccgacagctgcgactccgacagcaacggc
gtctacgagttcacccaggacctgcggcacggcgaccacagggaccagctccagcagcag
cgcagcaggaggaggaggaagaagaagaagcccaaggagaggaacaaggtcacccgcctg
tggaaggcgttcggcagcaagctgaagaggatcgtggaaagcaagtacttcaaccggggg
attatgatcgccattctcatcaacacgctgagcatgggcatcgagtaccacgagcagccg
gacgagttgaccaacgccctggagatcagtaacatcgtcttcacaagcatgtttgccctg
gagatgctcctgaaactccttgcctttggcctcttcggctacatcaagaacccgtacaac
atctttgacgggatcatagttgtcatcagcgtctgggagatcatcggtcagtcagatgga
ggcctttctgtgctgcgaacttttcggctgctccgagtgctgaaactggtgcgtttcatg
cctgccctccgccgccagctggtggtcctgatgaagacaatggacaacgtagccaccttc
tgcatgttgctcatgctcttcatctttatcttcagcattctcggcatgcatctttttgga
tgcaagttcagcttgaaaactgatacgggagacacagttccagatagaaagaattttgat
tccttgctttgggccattgtgacagtgtttcagattctcactcaagaggactggaacgtg
gtcctgtacaatgggatggcatctacatcctcatgggcagccctctacttcgtggccctg
atgacctttggcaattacgtgctcttcaaccttctggttgccattctggtagaaggcttc
caggcagagggggatgccaataggtcagacacagatgaggacaagacatctgccaacttc
gatgatgattttgagaagctgaaagacctccgagcaactgagatgaagatgtactcgctt
gccgtcaccccgaatgggcacctggagggcaggggaagcatgccacctcctatcatcatg
cgcactgcggccacaccaatgcccacgccaaagtgttccccacacatggattcagtgcac
acttttgtggactcaaggagagggagtaacgcttcaatagatcccatgagctacgatcag
aagtccttgtccagcctccgcagttccccttgtgccaactggggcaccagcagcaactgg
ggaagtcgacgctcaagctggaacagcctgggcagagccccgagcctcaagaagaagaac
cagtcgggagaaagagagtccctgctctccggggagggcaaaggcagcacagacgatgac
tctgatgatgccaagtccagcacggtcagcaggccctccctgcatcgccgggcagagtcc
ctggattaccgcagctccttggacctgcccgagctgctgcagttgcccaccatgcgccac
tcgctcagtatcagccccatggctgttctgcctgctgagtaccaggactgcaacggcaag
atggtgcacgtccccagcgagttcttcctgcgcatcgatggccataaggaggaggccatg
gactatgaggatgacatggaggatagttactgctaccggattcgtaaagtcctcgagccc
tacaaaccagagtggtgcaagactcatgaagattggtccctctacttgttttccccacag
aatcggttccgagtgatgtgccagaaggtgattgcccacaaaatgtttgatcatgtagtg
ctggtcttcatatttctcaactgcatcactatagcattggagagaccagacatagaccca
cacagcacggaaagggtattcctgagtgtttctaattatatcttcactgcaatcttcgtg
gctgaaatgatggttaaggtagtagctcttggctttttctctggggagaacacctatcta
cagagcagctggaacgttctggatggagtcctggtcttcgtatctatcattgacattatt
gtctccatggcatcagcaggcggagctaagatcctgggtgtccttcgtgttttgagactt
ctgcggaccttgagacctctccgagtcatcagtagagccccaggtctgaagctggtggta
gaaaccttgatctcttccttgaggcctattgggaatatcgttctcatctgctgtgctttc
ttcattatctttgggattttaggggtgcagctttttaaaggcaaattctactactgtgat
ggccctgatgtgaaaaacatcactacgaagactgactgtactaacgcacgctacaaatgg
gttcgacggaagtacaattttgacaatttgggacaggccctcatgtccttgtttgtcctc
tcctccaaagatggttgggtgaacatcatgtatgatggtctggatgctgtgggtattgac
caacagcccatccagaaccataacccttggatgcttctctacttcatctccttcctgctc
atcgtcagcttcttcgtgctcaacatgtttgtgggggtggtggtggagaacttccacaag
tgccgacagcaccaggaggcagaggaggcccggcgtcgggaggagaagcgtctgagacgc
ttggagaaaaagcgcaggagtaaggagatatacctgtctgaagcccagcgcaggccttac
tatgcagactattctccagcacggaagtacatccacagcctctgcaccagccactacctc
gacctcttcatcacgttcattatcggcgtcaacgtcatcaccatgtcaatggagcactac
aaccagccaaagtccctggatgaagccctgaagtactgcaactacgtgttcaccatagtt
tttgtgttcgaggcagttctgaagttggtggcatttggttttcgaaggttctttaaggac
aggtggaatcagctggatttggccatagttctcttatcaattgtgggaatcacactggag
gaaattgagatgaatgctgcactgcctatcaatcccacaataatacgcatcatgcgggtg
ctgagaatagcaagagtgctgaaactgcttaaaatggccaccggaatgcgagctctcctg
gacacagtggtacaagcgcttccccaggtagggaaccttggcctactttttatgctcctg
ttttttatctatgctgccctgggagtggaattgtttggcaagctagactgcagtgaagaa
aatccgtgcgaaggtctgagccggcacgcaactttcaccaacttcggcatggccttcctc
accctcttcagggtgtcaacaggggacaactggaatggcatcatgaaggataccctccgg
gagtgcactcgggaagacaagcactgcctcagctacctgcccgtcatctctcccgtctac
ttcgtcaccttcgtcctcatcgcacagttcgtcctggtcaacgtggtggtggcagtgctg
atgaagcacctggaggagagcaacaaggaggccaaggaggatgctgagatggatgcagag
atcgagctggagatgtccagaggagcaaccacctcggccaccactgggagcaggggagga
ggggtggccccggacagcagggcaccctacagaagtcaggaggctgtgaagtcggagtca
gcagtgcaggcgaagcaccaaaccctggaagcgctgagctgtgagaatgtctctttagcc
atcccagacacgctggagggggcagagactcccgtgatggaaatcccgtcctcctgctct
gtttcccaccatgtcctgactccttcccaccaccccccaggccacgaggctgaggttggc
acggccagtctgcggccacaggactctcaaaacctcctgacggtgcgcaagatctccgtg
tcccgcatgcactccttgcccaacgacagctacatgttccggcccgtcatgccagccaaa
acccccttccccctccacgaggtggagatggagacgtatccctgcaaatcccagcgaggg
tccatcacctccatccgctcccagccggtgggagcgtgttcctcctctctgagagtcccc
acggagtccctccagctggccgcgcgctctcccaaccacgacggccggcaccgctggaag
atccttcccccccacgtcgttcctcgatctcctactctcaacaagctgctgtgcaggcag
gaggccgttcggacggactccgtggacgtgcagacgccggatcccaaggacagcctgcaa
gcggagccgggagagaccctaccatcagcgaagcagccccagagcaccttcacccccagc
cctctccaccccacggcctcctccctgccggccacccctccgtgttctcctccatcctcc
ccacatcggcaccccggcacgctggctcggaagcacggctgcggccagcgtggggtcccc
agccggccgggcagcccctctgacagcccccccagccccgagggctgcctcgtggagccc
tccgacctggccgacgaggaggttcgccacattaacagctcagccaaagactggggggag
aactcggaggccgggagccgctcgacttcgccgttcatctccccggccccgtcgccggtg
cccctcaagaattgcagcacaagcagcctctccgggggaggcggcaaggagaaggacttg
aagaagttttacagcatcgacacaaagggcttcctcaacaagcccagctgggcagacgac
caaaggcggcactccatcgagatctgcccctccgtcagcgacggagactgtagctttgag
gaccctgccgaggagaagcagaggtcccctgcccacatccagccggagtccgagtacatc
cacggagcccggaggaagaagaagatgagcccgccctgcatttctatagatcctcccatg
gaggacgacggcggggcggcctcgcgcaccaaaccctccgagaacagcatgctgcgccga
aggaccccgtcctgcgagttcccggcttacagagagtccctggagctcgcggagagccag
cccgggggggaaccggcctccaaaacggagcgccggggccagcccccgtgccgcggggag
cacctggccatccccaacttctccttcgagcagtcggacggcagctccttgagcagcctc
tcggatctcctggacagcgggcaatccacgccggattcccggccggaccccgcggccccc
gaactgaaaaaagcggagcacttaaaaactcagtggggcagcgctgagaaaagcaaagag
ctcctcggccccgccaagagccccctccgcaagcaggacttggggcccgtgactgtcgca
acagaagaagacatcgacgagccagtatag
DBGET
integrated database retrieval system
