Anas platyrhynchos (mallard): 101803334
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Entry
101803334 CDS
T02816
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X3
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
101803334 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
apla01001
]
101803334 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
apla04054
]
101803334 (CIITA)
Enzymes [BR:
apla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
101803334 (CIITA)
Protein kinases [BR:
apla01001
]
Serine/threonine kinases: Other
TAF1 family
101803334 (CIITA)
Pattern recognition receptors [BR:
apla04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
101803334 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
LRR_14
NB-ARC
LRR_9
RsgA_GTPase
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
101803334
NCBI-ProteinID:
XP_021133209
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All DBs
Position
15:complement(968285..1004851)
Genome browser
AA seq
1213 aa
AA seq
DB search
MNLFKEILPRIRKILSGATASDDHALLNLMLKEHVISKEYHQALLHEKDREDLARKISLT
FVEKWDMYWNTLIPHSCLNLCGSRPQNIIDNEPTGTKHMSDSKRQIMDSALVCENGYLDL
LHSDIDPVHLFTLLDPKPSGNEESDLFADSEIDASNYDQLNSMDFLCTVENDENGDELYP
SSNAREAYARIAELAEYVLKDQQEKQVEDSFAGSLILDEMTAENTEIYTDVKMQKCHKRT
FLGSIESCADVSEPKYKKIVDAPAVSIRNGSFLAMPLSSHPASSTSLTHQHMSFSVPAIN
ALGRSFVIPGSSAPLIPECLPFGMKDKQENVDFADLAQQKNNFLIGNGTSSIITYPALTT
STETMFSPSFPVNVCGLEIFKEVQVPLIPSEELFKRPRSVEVFCRALKDYFGDICKYVAM
EREVTLDHLFIDGTLVQNQIETKTGKHSVKAMEKELVTYNLQWKEKASLERSQIFQIPGG
KDLETKVIVVLGKAGMGKSILVQKICQDWSNGEFPQFEFLFWFDCKQISLPEKCYSLKDL
LLDFFVKPQEGSNEIFEYILQNPAKVLLVFDGFQGLHDHENFPRCSDRQPDRGLYNIKEL
LSGLIQKKIFSGCTLLLTGRPKDKVNQYVSKVDKTIEIVGFSPQQRELYITKYFEGLPYC
DNALKLIKESEYLFSHCYSPVICRFVCFLCETVLEMGDKGLPSTLTTLFLKFVQQKIIPM
QTDVTAVQNQKCLATLARIAWYLGEKHQSTMNSDILPSKELKEFALKYGFFLPFAFPKHS
DTEEEELGTTFSDFVIQNFLGALHLVLAEDVKDKSLTKYLSFPSKKKKPYNWLDLVPRFL
AGLLFLQDDAYFCSLSNKEIKQSTKKQKTLLKYVRRLQINDLCPERLLELLHCIYETQYN
YLLQHVTLRLKTDLSFHGIFITPPDVHVLYSTLKRSRKEFSLDLQNSNIDMQGLKDLVGL
KNVASFRASLGDTIRLWKYLEQTKDYELLKLSTEKFVLDPFKAKTMKDISDLSDLVEMQE
MISCMQDASGCSSYEIPAIKNLRKIEFALGPAYGLQGFLKLVEILPSFPSLQHLDLDALS
ENGIGDEGAKSLSEVFPTLRSLEILNLSQNKITDVGAEKLATTLPALSSLTTLSLYNNNI
CDFGAENLAKVLHAMASLRVLDVQYNKITGVGAQQLTDSLRKCPHIKNLLIWNPTIPYGV
LEHLQQLDSRISV
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaatctttttaaggagatcctgcctagaataaggaagattctttcaggtgctacagct
tctgatgaccatgcattgcttaacctcatgctgaaagaacatgtgatatccaaggagtac
catcaggccttgctccacgaaaaagacagagaggaccttgcaaggaagatttctctgaca
tttgtggagaaatgggacatgtattggaacactttgattccccactcttgtttaaacctc
tgtggcagtagacctcaaaacatcatagataatgagccaacaggaaccaagcacatgtct
gacagcaagagacaaatcatggattcagcattggtgtgtgaaaatggctatcttgatttg
ctgcacagtgacatcgatccagtgcatctgtttactctcttagaccctaagccatctgga
aatgaagagagtgacttgtttgcagattctgaaattgatgccagcaattatgatcagttg
aatagtatggatttcctgtgtacagtggaaaatgatgaaaatggagatgaattgtatccc
tcttccaatgccagagaagcttatgctagaatagctgaattagcagaatatgtgctcaaa
gatcagcaggagaagcaagtggaagatagttttgcagggagccttattttggatgaaatg
actgctgaaaacactgagatatatactgatgtaaagatgcagaaatgtcacaaaagaaca
tttttaggctccatagagagttgtgctgatgtttcagaacccaaatacaagaaaattgtg
gatgcccctgcagtgtctataaggaatggcagtttcttggctatgcctctcagcagccat
ccagctagctccacctcgctaactcaccagcacatgtccttttctgttcccgctatcaat
gcactgggaagaagttttgtaattcctggatcttcagcacctttgattccagagtgtcta
ccctttggcatgaaagacaaacaagagaatgtagactttgcagatcttgctcagcagaaa
aataattttttaataggaaatggcacatcaagtattataacatatccagcactgactacc
tccactgaaacaatgttttccccgagttttccagttaatgtatgtggcttagaaatattc
aaagaagtccaagttcctctaattccttctgaagaacttttcaaaagaccaaggtcagtg
gaagtcttctgtagagcgcttaaggattactttggagacatatgcaaatatgtggccatg
gagcgtgaagtgactcttgatcacttgtttattgatggtacacttgtgcaaaaccaaatt
gaaaccaagactggaaagcacagtgtaaaagcaatggaaaaggagctggtaacttacaat
ctacaatggaaggaaaaggcatcacttgaaagaagccaaatatttcaaatcccaggaggt
aaagatttagagactaaagtgattgtggtgctgggaaaagcaggaatgggcaaaagcatt
cttgtacagaagatctgtcaggactggtccaatggagagtttcctcagtttgaatttctc
ttttggtttgactgcaaacaaataagcttgcctgagaagtgttacagcttgaaggatctg
cttcttgatttttttgtaaaacctcaagagggaagcaacgaaatctttgagtacatattg
caaaatcctgctaaagtccttctggtttttgatggttttcaagggttgcatgaccatgag
aattttcctcgttgctcagacagacagcctgacagaggcttgtacaatataaaggagctg
ctttcaggacttatccaaaaaaaaatattcagtggctgtactttattacttacaggaaga
ccaaaagacaaggtgaaccagtatgtgtccaaagtggataagactattgaaatagtagga
ttctctcctcagcagagagaattgtacataaccaaatactttgaaggattaccctactgt
gataatgcactgaaattaatcaaagagagtgagtacctgttcagtcattgttacagccct
gttatatgtagatttgtttgttttctctgtgagacagtacttgaaatgggagacaaaggc
cttccttcaactcttactacacttttcctgaaatttgttcagcaaaagataatacctatg
caaacagatgttacagctgtgcaaaatcaaaagtgccttgctacactagcccgtatagcc
tggtatcttggagaaaagcaccaaagtaccatgaacagtgatattcttccttctaaggaa
cttaaagaatttgctctgaaatacggatttttcctgccatttgcattccccaaacattca
gatactgaggaggaggaacttgggaccacattctccgattttgtcattcagaatttcttg
ggtgcgcttcaccttgtattagcagaagacgtgaaggataaaagtctaacaaagtacctg
tcttttccatccaagaagaaaaagccttataactggttagacttagtgcctcgatttttg
gctggattgttgttcctccaggatgatgcctacttctgctccctttctaataaggaaata
aaacaatcaaccaagaagcagaaaacactcctgaaatatgttagaaggttgcagataaat
gacctctgtccagagaggttacttgagcttttacactgcatatatgaaacacaatacaat
tatctgttgcagcatgtgaccttaaggctcaagacagacctgtcttttcatggcattttt
attacaccaccagatgttcatgtactttactctactttaaaaaggtcaagaaaagagttt
tccttggatttgcaaaacagcaacattgacatgcaggggctaaaagacttggttggcctg
aagaatgtggcatcattcagggcctcccttggtgatacaatcaggctatggaaatactta
gaacagacaaaagactatgaactgctgaaactgtcaacagaaaaatttgttctcgatccc
tttaaggcaaagacaatgaaggatatcagtgacctttcagaccttgtagaaatgcaggag
atgatcagttgcatgcaagatgcctctggttgcagcagctatgaaattcctgctataaag
aacctgagaaaaatagaatttgctctaggtccagcatatggccttcagggatttctaaaa
cttgtggaaattctgccgtcatttccatcacttcagcatttagaccttgatgctctgagt
gaaaatggcataggagatgaaggagcaaagagtctatctgaagtctttccaacactgaga
tcactggaaatattgaacttatcacagaataagataacagatgtgggtgcagagaaacta
gctacaactcttcctgccttatcttcattaacaacactaagcttgtacaataataacatt
tgtgattttggagcagaaaatcttgcaaaagttcttcatgcgatggcatctttaagagtg
ctagatgttcagtataacaaaataactggtgttggagcccaacagctgactgacagccta
cgaaaatgcccccatataaaaaacttgttgatatggaatcctacaattccttatggagtt
cttgaacaccttcagcagctggactcgaggatcagtgtgtag
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integrated database retrieval system
