Anas platyrhynchos (mallard): 101803365
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Entry
101803365 CDS
T02816
Symbol
EXOSC3
Name
(RefSeq) exosome complex component RRP40
KO
K03681
exosome complex component RRP40
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101803365 (EXOSC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apla03019
]
101803365 (EXOSC3)
Messenger RNA biogenesis [BR:
apla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101803365 (EXOSC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP40_N_mamm
RRP40_S1
KH_6
RRP4_S1
Rrp40_N
Motif
Other DBs
NCBI-GeneID:
101803365
NCBI-ProteinID:
XP_027315831
Ensembl:
ENSAPLG00000005966
EnsemblRapid:
ENSAPLG00030003540
LinkDB
All DBs
Position
6:complement(11123931..11126968)
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AA seq
269 aa
AA seq
DB search
MAEGGKMAAGSSKMAAEAAVGQVVLPGDVLLLPARPEHDAERLPLGPEAAPRGRLLCGPG
LRRCAAGLLVTKCGLLRHRQPGGGGGGAAAGGAYWVDSQQKRYVPVKGDQVIGIVTARAG
DVFRLDVGGSEQASLSYLAFEGATKRNRPNVQVGDLIYGKFLVANKDMEPEMVCIDSSGK
ASGMGVIGQDGFLFKVSLGLIRKLLAPKCEIIQELSQLYPFELVLGMNGRIWVKAKTVQQ
TLIIVNILEACEYMTSEQRKQALAKLSGN
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggggggcaagatggcggcgggcagcagcaagatggcggcggaggccgcggtg
gggcaggtggtgctgccgggcgacgtgctgctgctgcccgcccgccccgagcacgacgcc
gagcggctgccgctgggccccgaggcggccccgcggggccggctgctgtgcgggcccggc
ctgcggcgctgcgcggccgggctactggtgaccaagtgcgggctgctgcggcaccgccag
ccgggcggcggcggcggcggggcggcggcgggaggcgcctactgggtggactcgcagcag
aagcggtacgtgccggtgaagggcgaccaggtgatcggcatcgtcaccgccagggcgggg
gacgtcttcaggctggacgtcggcgggagcgagcaggcctcgctgtcctacctggccttc
gagggagcgaccaaaaggaaccggcccaacgtgcaggtgggagaccttatttatggtaaa
ttccttgtagcaaataaagacatggaaccagagatggtctgtatagacagcagcggaaaa
gcaagtggcatgggagtaattggacaagatggattcctctttaaagtttccttaggtctt
ataagaaagctcttggctcccaaatgtgaaataattcaggagttgtcacagttgtaccca
tttgagctggtgctgggaatgaatggaagaatatgggtaaaagcaaaaacagttcaacag
actttaattatagtaaatattttagaagcctgtgagtatatgacttcagagcagagaaaa
caggcgcttgccaaactatcaggaaattga
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