Anas platyrhynchos (mallard): 101803425
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Entry
101803425 CDS
T02816
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3 isoform X1
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101803425 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apla03021
]
101803425 (CPSF3)
03019 Messenger RNA biogenesis [BR:
apla03019
]
101803425 (CPSF3)
Transcription machinery [BR:
apla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101803425 (CPSF3)
Messenger RNA biogenesis [BR:
apla03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
101803425 (CPSF3)
U7-dependent histone pre-mRNA processing factors
101803425 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
101803425
NCBI-ProteinID:
XP_027311011
Ensembl:
ENSAPLG00000006941
UniProt:
A0A8B9QZ89
LinkDB
All DBs
Position
3:103617453..103636858
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AA seq
691 aa
AA seq
DB search
MAAKRKAEALIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDAL
PYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKV
SNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVK
LLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRG
GRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKI
RKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVI
IAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPH
VILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADK
KPEQGQRISGILVKRNFNYHILSPCDLSNYTDLAMSTVTQTQAIPYTGPFNLLYYQLQKL
TGDVEEIEIQQKPALKVFKNITVIQEPGMVVLEWVANPANDMYADTVTTVILEVQSNPKI
QKAAVQKISKKVDMDLYSKRMEIMLQDMFGEDCVSSKDGSVLCVTVDGKTANVSLDTRTV
DCEPGSEDDDSLREMVELAAQRLYDALSPVH
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaagcggaaagccgaggccctgatcccggcggaggagagcgaccagctgctc
atccggcccctaggtgctggccaagaagtaggaagatcatgcattattctggagtttaaa
ggaagaaaaataatgctcgattgtggcatccaccctggactggaaggaatggatgctctt
ccttacatagatttgatagaccctgctgagattgatctcctcctaattagtcatttccat
ttagatcactgtggagctttaccatggtttttgcagaaaacaagttttaaaggaaggacg
tttatgactcatgccacaaaagctatttacagatggcttctttcagactatgtcaaagtc
agtaatatatcagcagatgacatgctgtatacagaaacagaccttgaagaaagcatggac
aagattgaaaccatcaacttccatgaagtgaaagaggtggcaggaatcaaattctggtgc
taccacgcaggccacgttctgggagcagccatgtttatgattgaaatagctggtgtgaag
cttttgtatacaggtgatttctcaagacaggaagacagacatctgatggcagctgagatt
cccaatattaagcctgatattcttatcattgagtccacctatggtactcatattcatgag
aaaagagaagaacgagaggcaagattctgcaatactgttcatgacattgtaaacagagga
ggtagaggtcttattcctgtgtttgccctgggtcgagctcaagagctacttttaatttta
gatgaatactggcaaaatcacccagaactccacgatatccctatttactatgcctcctct
ttggccaagaagtgcatggcagtttatcagacatatgtcaatgccatgaatgacaaaatc
cgcaagcaaatcaacatcaacaatccctttgttttcaagcatattagtaacctgaagagt
atggatcattttgatgatatcggcccgagtgtggtgatggcttccccaggtatgatgcag
agtggcttatccagagagctgtttgagagctggtgcacagataagaggaatggagtgatt
atagccgggtactgtgttgaaggaacacttgctaagcacatcatgtctgaacccgaagag
atcacaactatgtcagggcaaaaactccccctgaagatgtctgtggattacatttctttc
tctgctcacacagattatcaacaaactagtgagtttatccgggccctgaaacctccacat
gtgattttagttcatggtgagcagaatgaaatggccaggttgaaagcagcattgatacgg
gaatatgaggataatgatgaagttcatatagaagttcataatcctaggaacaccgaagct
gtgacattaaacttcagaggagaaaaacttgccaaggtaatgggctctttagcagataag
aagccagaacaaggacagagaatttctggaatcctagttaaaagaaattttaactatcat
atcctttctccatgtgacctctccaattacacagacttggctatgagcactgtaacacag
acacaagctattccatataccggccctttcaatctcctttattaccagctacaaaagctt
actggtgatgtagaagaaatagaaatccaacaaaaaccagccctgaaggttttcaaaaat
attactgtgatccaagaaccaggcatggtagtccttgagtgggtggcaaatcctgctaat
gatatgtatgcagacaccgtgacaacagtgatactggaagttcagtcaaatcctaaaata
cagaaagctgccgtgcagaaaatttctaaaaaagtagatatggatttgtacagcaagaga
atggagatcatgcttcaggatatgtttggagaagactgtgtaagctcaaaagatggctct
gttctgtgtgtcacagtagatggaaagactgcaaacgtctctctggatactcggacagtt
gactgtgagccaggaagcgaagatgatgactcccttcgtgaaatggtggaactcgctgcg
cagaggctctatgatgccctcagcccagtacactga
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